Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1321 and GFF1322 overlap by 1 nucleotides GFF1322 and GFF1323 overlap by 1 nucleotides GFF1323 and GFF1324 are separated by 39 nucleotides
GFF1321 - dTDP-glucose 4,6-dehydratase, at 582,598 to 583,683
GFF1321
GFF1322 - Glucose-1-phosphate thymidylyltransferase, at 583,683 to 584,564
GFF1322
GFF1323 - dTDP-4-dehydrorhamnose 3,5-epimerase, at 584,564 to 585,109
GFF1323
GFF1324 - dTDP-4-dehydrorhamnose reductase, at 585,149 to 586,066
GFF1324
Position (kb) 583
584
585 Strain fitness (log2 ratio) -2
-1
0
1 at 582.946 kb on + strand, within GFF1321 at 583.630 kb on + strand at 583.654 kb on + strand at 583.654 kb on + strand at 583.654 kb on + strand at 583.654 kb on + strand at 583.702 kb on + strand at 583.702 kb on + strand at 583.702 kb on + strand at 583.731 kb on + strand at 583.731 kb on + strand at 583.791 kb on + strand, within GFF1322 at 583.791 kb on + strand, within GFF1322 at 583.791 kb on + strand, within GFF1322 at 583.792 kb on + strand, within GFF1322 at 583.794 kb on + strand, within GFF1322 at 583.871 kb on + strand, within GFF1322 at 583.924 kb on + strand, within GFF1322 at 583.924 kb on + strand, within GFF1322 at 584.298 kb on + strand, within GFF1322 at 584.298 kb on + strand, within GFF1322 at 584.298 kb on + strand, within GFF1322 at 584.298 kb on + strand, within GFF1322 at 584.298 kb on + strand, within GFF1322 at 584.298 kb on + strand, within GFF1322 at 584.468 kb on + strand, within GFF1322 at 584.468 kb on + strand, within GFF1322 at 584.505 kb on + strand at 584.505 kb on + strand at 584.529 kb on + strand at 584.545 kb on + strand at 585.111 kb on + strand at 585.111 kb on + strand at 585.111 kb on + strand at 585.111 kb on + strand at 585.112 kb on - strand at 585.112 kb on - strand at 585.114 kb on + strand at 585.115 kb on - strand at 585.115 kb on - strand at 585.119 kb on + strand at 585.119 kb on + strand at 585.119 kb on + strand at 585.120 kb on - strand at 585.142 kb on + strand at 585.142 kb on + strand at 585.142 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 582,946 + GFF1321 0.32 -1.0 583,630 + -0.8 583,654 + +0.0 583,654 + -0.8 583,654 + +0.6 583,654 + -2.7 583,702 + -1.3 583,702 + +0.0 583,702 + +0.3 583,731 + +0.4 583,731 + -0.7 583,791 + GFF1322 0.12 +1.3 583,791 + GFF1322 0.12 -1.2 583,791 + GFF1322 0.12 +0.0 583,792 + GFF1322 0.12 -2.3 583,794 + GFF1322 0.13 -2.2 583,871 + GFF1322 0.21 +0.0 583,924 + GFF1322 0.27 -0.4 583,924 + GFF1322 0.27 -0.3 584,298 + GFF1322 0.70 -1.3 584,298 + GFF1322 0.70 -0.8 584,298 + GFF1322 0.70 -1.8 584,298 + GFF1322 0.70 -0.4 584,298 + GFF1322 0.70 -1.8 584,298 + GFF1322 0.70 -1.0 584,468 + GFF1322 0.89 +0.0 584,468 + GFF1322 0.89 +0.0 584,505 + -1.9 584,505 + +0.2 584,529 + +0.6 584,545 + +0.6 585,111 + +0.8 585,111 + +0.6 585,111 + +0.4 585,111 + -0.1 585,112 - -1.3 585,112 - -0.2 585,114 + +0.4 585,115 - -0.6 585,115 - +0.3 585,119 + -1.5 585,119 + -0.3 585,119 + -0.1 585,120 - +0.4 585,142 + +0.0 585,142 + -0.8 585,142 + -0.1
Or see this region's nucleotide sequence