Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1222 and GFF1223 are separated by 27 nucleotides GFF1223 and GFF1224 are separated by 21 nucleotides GFF1224 and GFF1225 are separated by 10 nucleotides
GFF1222 - GTPase HflX, at 467,782 to 468,909
GFF1222
GFF1223 - hypothetical protein, at 468,937 to 470,130
GFF1223
GFF1224 - Modulator of FtsH protease HflC, at 470,152 to 471,024
GFF1224
GFF1225 - hypothetical protein, at 471,035 to 471,217
GFF1225
Position (kb) 468
469
470
471 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 467.947 kb on + strand, within GFF1222 at 467.947 kb on + strand, within GFF1222 at 467.947 kb on + strand, within GFF1222 at 467.998 kb on + strand, within GFF1222 at 468.141 kb on + strand, within GFF1222 at 468.141 kb on + strand, within GFF1222 at 468.397 kb on + strand, within GFF1222 at 468.426 kb on + strand, within GFF1222 at 468.451 kb on + strand, within GFF1222 at 468.451 kb on + strand, within GFF1222 at 468.467 kb on + strand, within GFF1222 at 468.467 kb on + strand, within GFF1222 at 468.467 kb on + strand, within GFF1222 at 468.467 kb on + strand, within GFF1222 at 468.468 kb on - strand, within GFF1222 at 468.468 kb on - strand, within GFF1222 at 468.591 kb on + strand, within GFF1222 at 468.591 kb on + strand, within GFF1222 at 468.620 kb on + strand, within GFF1222 at 468.687 kb on - strand, within GFF1222 at 468.781 kb on + strand, within GFF1222 at 468.781 kb on + strand, within GFF1222 at 468.786 kb on + strand, within GFF1222 at 468.786 kb on + strand, within GFF1222 at 468.786 kb on + strand, within GFF1222 at 468.786 kb on + strand, within GFF1222 at 468.786 kb on + strand, within GFF1222 at 468.830 kb on + strand at 468.830 kb on + strand at 468.839 kb on + strand at 468.854 kb on + strand at 468.901 kb on + strand at 468.901 kb on + strand at 468.901 kb on + strand at 468.901 kb on + strand at 468.901 kb on + strand at 468.901 kb on + strand at 468.923 kb on + strand at 468.923 kb on + strand at 468.923 kb on + strand at 468.923 kb on + strand at 469.044 kb on + strand at 469.044 kb on + strand at 469.150 kb on + strand, within GFF1223 at 469.152 kb on + strand, within GFF1223 at 469.152 kb on + strand, within GFF1223 at 469.309 kb on + strand, within GFF1223 at 469.309 kb on + strand, within GFF1223 at 469.309 kb on + strand, within GFF1223 at 469.352 kb on + strand, within GFF1223 at 469.402 kb on + strand, within GFF1223 at 469.402 kb on + strand, within GFF1223 at 469.434 kb on + strand, within GFF1223 at 469.496 kb on + strand, within GFF1223 at 469.525 kb on + strand, within GFF1223 at 469.649 kb on + strand, within GFF1223 at 469.649 kb on + strand, within GFF1223 at 469.752 kb on + strand, within GFF1223 at 469.908 kb on + strand, within GFF1223 at 469.980 kb on + strand, within GFF1223 at 469.980 kb on + strand, within GFF1223 at 470.081 kb on + strand at 470.081 kb on + strand at 470.128 kb on + strand at 470.149 kb on + strand at 470.149 kb on + strand at 470.177 kb on + strand at 470.221 kb on + strand at 470.223 kb on + strand at 470.223 kb on + strand at 470.223 kb on + strand at 470.223 kb on + strand at 470.223 kb on + strand at 470.223 kb on + strand at 470.223 kb on + strand at 470.223 kb on + strand at 470.242 kb on + strand, within GFF1224 at 470.242 kb on + strand, within GFF1224 at 470.242 kb on + strand, within GFF1224 at 470.243 kb on + strand, within GFF1224 at 470.313 kb on + strand, within GFF1224 at 470.313 kb on + strand, within GFF1224 at 470.382 kb on + strand, within GFF1224 at 470.405 kb on + strand, within GFF1224 at 470.452 kb on + strand, within GFF1224 at 470.455 kb on + strand, within GFF1224 at 470.455 kb on + strand, within GFF1224 at 470.455 kb on + strand, within GFF1224 at 470.640 kb on + strand, within GFF1224 at 470.640 kb on + strand, within GFF1224 at 470.654 kb on + strand, within GFF1224 at 470.663 kb on + strand, within GFF1224 at 470.663 kb on + strand, within GFF1224 at 470.695 kb on + strand, within GFF1224 at 470.818 kb on + strand, within GFF1224 at 470.872 kb on + strand, within GFF1224 at 470.872 kb on + strand, within GFF1224 at 470.873 kb on - strand, within GFF1224 at 470.905 kb on + strand, within GFF1224 at 470.905 kb on + strand, within GFF1224 at 470.914 kb on + strand, within GFF1224 at 470.914 kb on + strand, within GFF1224 at 470.998 kb on + strand at 470.998 kb on + strand at 470.998 kb on + strand at 471.006 kb on + strand at 471.006 kb on + strand at 471.007 kb on - strand at 471.096 kb on + strand, within GFF1225 at 471.096 kb on + strand, within GFF1225
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 467,947 + GFF1222 0.15 -0.3 467,947 + GFF1222 0.15 -0.1 467,947 + GFF1222 0.15 +0.2 467,998 + GFF1222 0.19 +0.5 468,141 + GFF1222 0.32 -0.6 468,141 + GFF1222 0.32 -0.2 468,397 + GFF1222 0.55 -0.3 468,426 + GFF1222 0.57 -1.8 468,451 + GFF1222 0.59 +0.6 468,451 + GFF1222 0.59 -1.3 468,467 + GFF1222 0.61 -1.7 468,467 + GFF1222 0.61 -0.4 468,467 + GFF1222 0.61 -1.3 468,467 + GFF1222 0.61 +0.3 468,468 - GFF1222 0.61 -1.0 468,468 - GFF1222 0.61 -1.3 468,591 + GFF1222 0.72 +0.3 468,591 + GFF1222 0.72 -1.0 468,620 + GFF1222 0.74 -1.5 468,687 - GFF1222 0.80 -1.0 468,781 + GFF1222 0.89 -0.3 468,781 + GFF1222 0.89 +0.0 468,786 + GFF1222 0.89 +0.2 468,786 + GFF1222 0.89 +0.0 468,786 + GFF1222 0.89 -0.9 468,786 + GFF1222 0.89 +0.3 468,786 + GFF1222 0.89 -1.3 468,830 + -2.0 468,830 + +0.6 468,839 + -0.1 468,854 + -3.5 468,901 + -2.2 468,901 + -0.6 468,901 + -0.6 468,901 + -1.0 468,901 + +1.0 468,901 + +1.0 468,923 + -0.9 468,923 + -0.3 468,923 + -0.2 468,923 + +0.3 469,044 + -1.0 469,044 + +0.5 469,150 + GFF1223 0.18 -0.5 469,152 + GFF1223 0.18 -0.3 469,152 + GFF1223 0.18 +0.0 469,309 + GFF1223 0.31 +0.6 469,309 + GFF1223 0.31 -1.6 469,309 + GFF1223 0.31 -0.7 469,352 + GFF1223 0.35 -0.6 469,402 + GFF1223 0.39 +0.0 469,402 + GFF1223 0.39 -1.6 469,434 + GFF1223 0.42 -1.3 469,496 + GFF1223 0.47 -1.0 469,525 + GFF1223 0.49 -0.4 469,649 + GFF1223 0.60 -1.0 469,649 + GFF1223 0.60 -0.4 469,752 + GFF1223 0.68 -1.0 469,908 + GFF1223 0.81 +0.0 469,980 + GFF1223 0.87 -1.3 469,980 + GFF1223 0.87 -0.9 470,081 + +0.0 470,081 + -0.3 470,128 + -1.4 470,149 + -1.0 470,149 + -0.3 470,177 + -0.6 470,221 + -0.4 470,223 + -0.6 470,223 + +0.3 470,223 + +0.6 470,223 + -0.6 470,223 + -0.2 470,223 + +0.5 470,223 + -0.5 470,223 + +1.3 470,242 + GFF1224 0.10 -0.3 470,242 + GFF1224 0.10 -0.5 470,242 + GFF1224 0.10 +0.0 470,243 + GFF1224 0.10 +0.0 470,313 + GFF1224 0.18 +0.3 470,313 + GFF1224 0.18 +0.5 470,382 + GFF1224 0.26 -1.3 470,405 + GFF1224 0.29 -0.2 470,452 + GFF1224 0.34 +0.0 470,455 + GFF1224 0.35 -0.1 470,455 + GFF1224 0.35 -1.8 470,455 + GFF1224 0.35 -0.4 470,640 + GFF1224 0.56 -0.2 470,640 + GFF1224 0.56 +0.2 470,654 + GFF1224 0.58 -0.2 470,663 + GFF1224 0.59 +1.0 470,663 + GFF1224 0.59 -0.8 470,695 + GFF1224 0.62 -0.1 470,818 + GFF1224 0.76 -0.1 470,872 + GFF1224 0.82 +0.3 470,872 + GFF1224 0.82 -1.6 470,873 - GFF1224 0.83 +0.0 470,905 + GFF1224 0.86 -0.4 470,905 + GFF1224 0.86 -0.1 470,914 + GFF1224 0.87 -0.1 470,914 + GFF1224 0.87 -0.1 470,998 + +0.3 470,998 + +0.2 470,998 + -0.6 471,006 + -0.8 471,006 + -1.2 471,007 - -0.6 471,096 + GFF1225 0.33 -1.0 471,096 + GFF1225 0.33 +0.3
Or see this region's nucleotide sequence