Experiment: NL-CCM; ambient oxygen
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_04170 and MPMX19_04171 are separated by 671 nucleotides MPMX19_04171 and MPMX19_04172 are separated by 291 nucleotides
MPMX19_04170: MPMX19_04170 - Glutathione-regulated potassium-efflux system protein KefC, at 489,968 to 491,665
_04170
MPMX19_04171: MPMX19_04171 - 16S ribosomal RNA, at 492,337 to 493,818
_04171
MPMX19_04172: MPMX19_04172 - 23S ribosomal RNA, at 494,110 to 496,843
_04172
Position (kb) 492
493
494 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 491.409 kb on + strand, within MPMX19_04170 at 491.409 kb on + strand, within MPMX19_04170 at 491.409 kb on + strand, within MPMX19_04170 at 491.409 kb on + strand, within MPMX19_04170 at 491.409 kb on + strand, within MPMX19_04170 at 491.409 kb on + strand, within MPMX19_04170 at 491.409 kb on + strand, within MPMX19_04170 at 491.409 kb on + strand, within MPMX19_04170 at 491.409 kb on + strand, within MPMX19_04170 at 491.409 kb on + strand, within MPMX19_04170 at 491.409 kb on + strand, within MPMX19_04170 at 491.409 kb on + strand, within MPMX19_04170 at 491.409 kb on + strand, within MPMX19_04170 at 491.409 kb on + strand, within MPMX19_04170 at 491.409 kb on + strand, within MPMX19_04170 at 491.409 kb on + strand, within MPMX19_04170 at 491.409 kb on + strand, within MPMX19_04170 at 491.409 kb on + strand, within MPMX19_04170 at 491.409 kb on + strand, within MPMX19_04170 at 491.409 kb on + strand, within MPMX19_04170 at 491.409 kb on + strand, within MPMX19_04170 at 491.409 kb on + strand, within MPMX19_04170 at 491.409 kb on + strand, within MPMX19_04170 at 491.409 kb on + strand, within MPMX19_04170 at 491.409 kb on + strand, within MPMX19_04170 at 491.409 kb on + strand, within MPMX19_04170 at 491.409 kb on + strand, within MPMX19_04170 at 491.409 kb on + strand, within MPMX19_04170 at 491.409 kb on + strand, within MPMX19_04170 at 491.409 kb on + strand, within MPMX19_04170 at 491.409 kb on + strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.563 kb on - strand at 491.701 kb on + strand at 491.701 kb on + strand at 491.701 kb on + strand at 491.701 kb on + strand at 491.701 kb on + strand at 491.702 kb on - strand at 491.702 kb on - strand at 491.702 kb on - strand at 491.702 kb on - strand at 491.702 kb on - strand at 491.702 kb on - strand at 491.702 kb on - strand at 491.702 kb on - strand at 491.743 kb on + strand at 491.743 kb on + strand at 491.744 kb on - strand at 491.744 kb on - strand at 491.744 kb on - strand at 491.744 kb on - strand at 491.777 kb on + strand at 491.778 kb on - strand at 491.778 kb on - strand at 491.778 kb on - strand at 491.778 kb on - strand at 491.778 kb on - strand at 491.778 kb on - strand at 491.778 kb on - strand at 491.826 kb on - strand at 491.853 kb on + strand at 491.853 kb on + strand at 491.853 kb on + strand at 491.853 kb on + strand at 491.853 kb on + strand at 491.853 kb on + strand at 491.853 kb on + strand at 491.853 kb on + strand at 491.853 kb on + strand at 491.853 kb on + strand at 491.853 kb on + strand at 491.853 kb on + strand at 491.853 kb on + strand at 491.853 kb on + strand at 491.853 kb on + strand at 491.853 kb on + strand at 491.853 kb on + strand at 491.853 kb on + strand at 491.853 kb on + strand at 491.853 kb on + strand at 491.854 kb on - strand at 491.854 kb on - strand at 491.854 kb on - strand at 491.854 kb on - strand at 491.854 kb on - strand at 491.854 kb on - strand at 491.854 kb on - strand at 491.854 kb on - strand at 491.854 kb on - strand at 491.854 kb on - strand at 491.854 kb on - strand at 491.854 kb on - strand at 491.854 kb on - strand at 491.854 kb on - strand at 491.854 kb on - strand at 491.854 kb on - strand at 491.854 kb on - strand at 491.855 kb on + strand at 491.855 kb on + strand at 491.855 kb on + strand at 491.855 kb on + strand at 491.855 kb on + strand at 491.855 kb on + strand at 491.855 kb on + strand at 491.855 kb on + strand at 491.855 kb on + strand at 491.855 kb on + strand at 491.855 kb on + strand at 491.855 kb on + strand at 491.856 kb on - strand at 491.856 kb on - strand at 491.856 kb on - strand at 491.856 kb on - strand at 491.856 kb on - strand at 491.856 kb on - strand at 491.856 kb on - strand at 491.857 kb on + strand at 491.858 kb on - strand at 491.858 kb on - strand at 491.858 kb on - strand at 492.063 kb on + strand at 492.063 kb on + strand at 492.063 kb on + strand at 492.134 kb on + strand at 492.134 kb on + strand at 492.134 kb on + strand at 492.134 kb on + strand at 492.134 kb on + strand at 492.134 kb on + strand at 492.134 kb on + strand at 492.134 kb on + strand at 492.134 kb on + strand at 492.134 kb on + strand at 493.254 kb on + strand, within MPMX19_04171 at 493.276 kb on + strand, within MPMX19_04171 at 493.276 kb on + strand, within MPMX19_04171 at 493.276 kb on + strand, within MPMX19_04171 at 494.022 kb on + strand at 494.022 kb on + strand at 494.022 kb on + strand at 494.022 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM; ambient oxygen remove 491,409 + MPMX19_04170 0.85 -0.5 491,409 + MPMX19_04170 0.85 -1.4 491,409 + MPMX19_04170 0.85 -0.5 491,409 + MPMX19_04170 0.85 -0.8 491,409 + MPMX19_04170 0.85 -0.2 491,409 + MPMX19_04170 0.85 -0.8 491,409 + MPMX19_04170 0.85 +0.1 491,409 + MPMX19_04170 0.85 -0.5 491,409 + MPMX19_04170 0.85 -0.4 491,409 + MPMX19_04170 0.85 +0.1 491,409 + MPMX19_04170 0.85 -1.4 491,409 + MPMX19_04170 0.85 +0.2 491,409 + MPMX19_04170 0.85 -1.6 491,409 + MPMX19_04170 0.85 +1.8 491,409 + MPMX19_04170 0.85 +1.8 491,409 + MPMX19_04170 0.85 -2.0 491,409 + MPMX19_04170 0.85 -0.9 491,409 + MPMX19_04170 0.85 -0.2 491,409 + MPMX19_04170 0.85 -0.0 491,409 + MPMX19_04170 0.85 +0.6 491,409 + MPMX19_04170 0.85 +0.2 491,409 + MPMX19_04170 0.85 -1.0 491,409 + MPMX19_04170 0.85 +0.1 491,409 + MPMX19_04170 0.85 -1.0 491,409 + MPMX19_04170 0.85 -0.7 491,409 + MPMX19_04170 0.85 +0.1 491,409 + MPMX19_04170 0.85 -1.0 491,409 + MPMX19_04170 0.85 -0.0 491,409 + MPMX19_04170 0.85 -0.4 491,409 + MPMX19_04170 0.85 -0.2 491,409 + MPMX19_04170 0.85 -1.6 491,410 - MPMX19_04170 0.85 -0.9 491,410 - MPMX19_04170 0.85 -1.4 491,410 - MPMX19_04170 0.85 -0.9 491,410 - MPMX19_04170 0.85 +1.0 491,410 - MPMX19_04170 0.85 -1.3 491,410 - MPMX19_04170 0.85 -0.2 491,410 - MPMX19_04170 0.85 -1.2 491,410 - MPMX19_04170 0.85 -2.1 491,410 - MPMX19_04170 0.85 +0.3 491,410 - MPMX19_04170 0.85 +0.7 491,410 - MPMX19_04170 0.85 +0.8 491,410 - MPMX19_04170 0.85 -2.3 491,410 - MPMX19_04170 0.85 -0.4 491,410 - MPMX19_04170 0.85 -1.0 491,410 - MPMX19_04170 0.85 +0.7 491,410 - MPMX19_04170 0.85 -0.6 491,410 - MPMX19_04170 0.85 -1.2 491,410 - MPMX19_04170 0.85 -2.4 491,410 - MPMX19_04170 0.85 +1.2 491,410 - MPMX19_04170 0.85 -0.7 491,410 - MPMX19_04170 0.85 -0.0 491,410 - MPMX19_04170 0.85 -0.8 491,410 - MPMX19_04170 0.85 -1.2 491,410 - MPMX19_04170 0.85 -1.0 491,410 - MPMX19_04170 0.85 +2.1 491,410 - MPMX19_04170 0.85 -0.2 491,410 - MPMX19_04170 0.85 -2.1 491,410 - MPMX19_04170 0.85 -0.7 491,410 - MPMX19_04170 0.85 -1.7 491,410 - MPMX19_04170 0.85 -1.2 491,410 - MPMX19_04170 0.85 +0.2 491,410 - MPMX19_04170 0.85 -1.6 491,563 - -0.8 491,701 + -0.3 491,701 + -0.5 491,701 + +0.4 491,701 + -1.6 491,701 + -1.9 491,702 - -0.1 491,702 - -1.0 491,702 - -0.4 491,702 - +0.5 491,702 - -0.4 491,702 - -1.1 491,702 - -0.6 491,702 - -1.0 491,743 + -1.2 491,743 + -1.6 491,744 - +0.8 491,744 - -0.6 491,744 - -0.7 491,744 - -0.4 491,777 + +0.2 491,778 - -0.8 491,778 - -1.9 491,778 - -1.4 491,778 - +2.0 491,778 - -0.8 491,778 - -0.4 491,778 - -0.5 491,826 - -0.3 491,853 + -1.2 491,853 + -1.2 491,853 + -1.2 491,853 + +0.3 491,853 + -0.8 491,853 + -1.6 491,853 + -1.0 491,853 + +0.5 491,853 + -1.4 491,853 + -1.0 491,853 + -0.8 491,853 + -0.3 491,853 + -0.2 491,853 + +0.0 491,853 + +0.2 491,853 + +0.2 491,853 + -1.2 491,853 + +0.6 491,853 + -1.4 491,853 + -2.0 491,854 - -1.0 491,854 - -0.6 491,854 - -0.5 491,854 - -1.5 491,854 - -2.4 491,854 - -0.2 491,854 - -0.6 491,854 - -0.4 491,854 - -1.1 491,854 - -0.2 491,854 - -1.2 491,854 - -0.5 491,854 - -1.5 491,854 - +0.6 491,854 - -0.2 491,854 - -0.5 491,854 - -2.1 491,855 + -2.5 491,855 + -0.3 491,855 + -0.9 491,855 + -0.3 491,855 + -1.4 491,855 + -0.8 491,855 + -1.2 491,855 + -1.1 491,855 + -0.6 491,855 + -1.4 491,855 + +0.1 491,855 + -0.9 491,856 - -1.0 491,856 - -1.5 491,856 - -0.8 491,856 - -2.8 491,856 - +0.9 491,856 - -2.4 491,856 - -0.6 491,857 + -2.7 491,858 - -0.1 491,858 - -1.4 491,858 - +0.5 492,063 + -1.2 492,063 + -1.1 492,063 + -0.9 492,134 + -0.2 492,134 + -0.6 492,134 + -0.6 492,134 + +0.8 492,134 + -0.8 492,134 + +0.3 492,134 + -1.2 492,134 + -0.9 492,134 + -0.4 492,134 + -1.2 493,254 + MPMX19_04171 0.62 -1.2 493,276 + MPMX19_04171 0.63 -1.7 493,276 + MPMX19_04171 0.63 -0.6 493,276 + MPMX19_04171 0.63 -0.4 494,022 + +0.1 494,022 + -0.1 494,022 + -1.3 494,022 + -2.5
Or see this region's nucleotide sequence