Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03750

Experiment: NL-CCM; ambient oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; ambient oxygen
1,193,626	+		MPMX19_03749	0.45	+0.2
1,193,626	+		MPMX19_03749	0.45	+0.6
1,193,626	+		MPMX19_03749	0.45	+2.8
1,193,626	+		MPMX19_03749	0.45	+0.8
1,193,626	+		MPMX19_03749	0.45	-0.2
1,193,626	+		MPMX19_03749	0.45	-0.2
1,193,626	+		MPMX19_03749	0.45	+0.8
1,193,626	+		MPMX19_03749	0.45	-1.6
1,193,627	-		MPMX19_03749	0.45	-0.7
1,193,627	-		MPMX19_03749	0.45	-1.5
1,193,627	-		MPMX19_03749	0.45	-0.3
1,193,627	-		MPMX19_03749	0.45	+0.2
1,193,627	-		MPMX19_03749	0.45	-0.1
1,193,627	-		MPMX19_03749	0.45	+0.2
1,193,627	-		MPMX19_03749	0.45	-0.3
1,193,627	-		MPMX19_03749	0.45	+0.5
1,193,627	-		MPMX19_03749	0.45	+0.4
1,193,627	-		MPMX19_03749	0.45	-1.7
1,193,803	+		MPMX19_03749	0.70	+1.0
1,193,804	-		MPMX19_03749	0.70	+0.8
1,193,899	+		MPMX19_03749	0.84	-0.4
1,193,899	+		MPMX19_03749	0.84	-0.2
1,193,899	+		MPMX19_03749	0.84	-0.0
1,193,899	+		MPMX19_03749	0.84	-1.3
1,193,900	-		MPMX19_03749	0.84	-0.2
1,193,900	-		MPMX19_03749	0.84	+1.8
1,193,900	-		MPMX19_03749	0.84	-1.8
1,193,900	-		MPMX19_03749	0.84	-1.5
1,193,911	+		MPMX19_03749	0.85	-0.4
1,193,911	+		MPMX19_03749	0.85	-2.2
1,193,911	+		MPMX19_03749	0.85	-2.1
1,193,911	+		MPMX19_03749	0.85	-0.3
1,193,911	+		MPMX19_03749	0.85	-0.5
1,193,912	-		MPMX19_03749	0.86	-0.1
1,194,019	+				-0.1
1,194,019	+				-1.0
1,194,019	+				-1.1
1,194,019	+				+0.2
1,194,020	-				+1.3
1,194,020	-				+0.1
1,194,020	-				-0.4
1,194,020	-				-0.9
1,194,122	+				-0.5
1,194,122	+				-1.5
1,194,122	+				-1.1
1,194,122	+				-0.7
1,194,122	+				+0.5
1,194,122	+				-0.7
1,194,123	-				+0.4
1,194,123	-				-1.8
1,194,123	-				+0.5
1,194,123	-				-0.1
1,194,225	+				-0.1
1,194,225	+				-1.9
1,194,225	+				+1.2
1,194,225	+				-0.9
1,194,225	+				-0.2
1,194,269	+				+0.2
1,194,269	+				+1.6
1,194,269	+				-1.2
1,194,269	+				+0.5
1,194,269	+				+0.8
1,194,269	+				-0.2
1,194,270	-				-0.1
1,194,270	-				-0.2
1,194,270	-				-2.1
1,194,270	-				-0.5
1,194,270	-				-1.0
1,194,709	+		MPMX19_03750	0.11	-0.4
1,194,709	+		MPMX19_03750	0.11	-2.0
1,194,709	+		MPMX19_03750	0.11	+0.6
1,194,710	-		MPMX19_03750	0.11	-1.2
1,194,775	+		MPMX19_03750	0.14	+1.2
1,194,775	+		MPMX19_03750	0.14	-0.7
1,194,775	+		MPMX19_03750	0.14	-0.8
1,194,775	+		MPMX19_03750	0.14	-1.5
1,194,775	+		MPMX19_03750	0.14	-1.2
1,194,775	+		MPMX19_03750	0.14	-2.3
1,194,775	+		MPMX19_03750	0.14	+0.2
1,194,775	+		MPMX19_03750	0.14	+0.8
1,194,775	+		MPMX19_03750	0.14	+0.2
1,194,775	+		MPMX19_03750	0.14	+0.4
1,194,775	+		MPMX19_03750	0.14	-1.2
1,194,775	+		MPMX19_03750	0.14	-0.2
1,194,775	+		MPMX19_03750	0.14	-1.8
1,194,775	+		MPMX19_03750	0.14	+0.4
1,194,775	+		MPMX19_03750	0.14	-1.8
1,194,775	+		MPMX19_03750	0.14	-0.7
1,194,775	+		MPMX19_03750	0.14	-2.5
1,194,776	-		MPMX19_03750	0.15	-0.4
1,194,776	-		MPMX19_03750	0.15	+1.1
1,194,776	-		MPMX19_03750	0.15	-0.7
1,194,776	-		MPMX19_03750	0.15	+0.4
1,194,776	-		MPMX19_03750	0.15	+0.2
1,194,776	-		MPMX19_03750	0.15	-1.7
1,194,776	-		MPMX19_03750	0.15	-0.0
1,194,776	-		MPMX19_03750	0.15	+0.2
1,194,776	-		MPMX19_03750	0.15	-2.3
1,194,776	-		MPMX19_03750	0.15	+0.8
1,194,862	+		MPMX19_03750	0.19	-1.2
1,194,862	+		MPMX19_03750	0.19	-0.5
1,194,862	+		MPMX19_03750	0.19	-1.6
1,194,863	-		MPMX19_03750	0.19	+0.6
1,194,863	-		MPMX19_03750	0.19	+0.2
1,194,863	-		MPMX19_03750	0.19	+0.9
1,194,863	-		MPMX19_03750	0.19	-0.8
1,194,863	-		MPMX19_03750	0.19	-0.2
1,194,863	-		MPMX19_03750	0.19	+0.9
1,194,863	-		MPMX19_03750	0.19	-2.3
1,194,982	+		MPMX19_03750	0.26	+1.1
1,194,982	+		MPMX19_03750	0.26	-1.9
1,194,982	+		MPMX19_03750	0.26	-2.2
1,194,982	+		MPMX19_03750	0.26	-1.9
1,194,983	-		MPMX19_03750	0.26	-0.8
1,194,983	-		MPMX19_03750	0.26	+0.2
1,194,983	-		MPMX19_03750	0.26	+0.8
1,194,983	-		MPMX19_03750	0.26	-0.0
1,194,983	-		MPMX19_03750	0.26	-1.1
1,194,983	-		MPMX19_03750	0.26	-0.7
1,194,983	-		MPMX19_03750	0.26	-0.1
1,195,078	+		MPMX19_03750	0.32	-0.2
1,195,201	+		MPMX19_03750	0.39	-2.4
1,195,201	+		MPMX19_03750	0.39	-1.1
1,195,202	-		MPMX19_03750	0.39	-1.0
1,195,202	-		MPMX19_03750	0.39	-0.2
1,195,202	-		MPMX19_03750	0.39	+1.5
1,195,283	-		MPMX19_03750	0.43	+0.2
1,195,283	-		MPMX19_03750	0.43	-1.9
1,195,283	-		MPMX19_03750	0.43	-1.5
1,195,558	+		MPMX19_03750	0.59	-0.1
1,195,558	+		MPMX19_03750	0.59	-0.3
1,195,558	+		MPMX19_03750	0.59	-0.1
1,195,559	-		MPMX19_03750	0.59	-1.0
1,195,559	-		MPMX19_03750	0.59	+0.5
1,195,559	-		MPMX19_03750	0.59	-0.3
1,195,900	+		MPMX19_03750	0.78	-1.7
1,195,900	+		MPMX19_03750	0.78	-0.9
1,195,900	+		MPMX19_03750	0.78	+0.6
1,195,900	+		MPMX19_03750	0.78	-0.3
1,195,900	+		MPMX19_03750	0.78	-0.1
1,195,900	+		MPMX19_03750	0.78	-0.4
1,195,900	+		MPMX19_03750	0.78	+0.8
1,195,900	+		MPMX19_03750	0.78	-0.4
1,195,900	+		MPMX19_03750	0.78	+1.8
1,195,900	+		MPMX19_03750	0.78	-1.8
1,195,900	+		MPMX19_03750	0.78	-1.4
1,195,900	+		MPMX19_03750	0.78	-0.3
1,195,900	+		MPMX19_03750	0.78	-1.1
1,195,900	+		MPMX19_03750	0.78	-0.7
1,195,900	+		MPMX19_03750	0.78	-0.5
1,195,900	+		MPMX19_03750	0.78	+0.2
1,195,901	-		MPMX19_03750	0.78	-1.0
1,195,901	-		MPMX19_03750	0.78	+0.2
1,195,901	-		MPMX19_03750	0.78	+0.2
1,195,901	-		MPMX19_03750	0.78	-2.0
1,195,901	-		MPMX19_03750	0.78	+0.8
1,195,901	-		MPMX19_03750	0.78	-0.3
1,195,901	-		MPMX19_03750	0.78	+0.2
1,195,901	-		MPMX19_03750	0.78	+0.8
1,195,901	-		MPMX19_03750	0.78	+0.4
1,195,901	-		MPMX19_03750	0.78	-1.5
1,195,901	-		MPMX19_03750	0.78	-1.6
1,195,901	-		MPMX19_03750	0.78	-1.8
1,195,901	-		MPMX19_03750	0.78	-0.2
1,195,901	-		MPMX19_03750	0.78	-1.1
1,195,901	-		MPMX19_03750	0.78	+1.1
1,196,026	+		MPMX19_03750	0.86	-1.1
1,196,026	+		MPMX19_03750	0.86	-0.2
1,196,029	+		MPMX19_03750	0.86	-2.3
1,196,029	+		MPMX19_03750	0.86	-0.3
1,196,029	+		MPMX19_03750	0.86	+0.2
1,196,029	+		MPMX19_03750	0.86	-1.2
1,196,029	+		MPMX19_03750	0.86	-0.0
1,196,029	+		MPMX19_03750	0.86	-2.5
1,196,029	+		MPMX19_03750	0.86	+0.8
1,196,029	+		MPMX19_03750	0.86	-0.6
1,196,029	+		MPMX19_03750	0.86	-0.7
1,196,029	+		MPMX19_03750	0.86	-0.5
1,196,029	+		MPMX19_03750	0.86	+0.2
1,196,029	+		MPMX19_03750	0.86	+0.5
1,196,029	+		MPMX19_03750	0.86	-1.7
1,196,029	+		MPMX19_03750	0.86	+0.1
1,196,029	+		MPMX19_03750	0.86	-0.2
1,196,029	+		MPMX19_03750	0.86	-2.0
1,196,030	-		MPMX19_03750	0.86	-0.2
1,196,030	-		MPMX19_03750	0.86	-1.7
1,196,030	-		MPMX19_03750	0.86	-0.4
1,196,030	-		MPMX19_03750	0.86	-0.0
1,196,030	-		MPMX19_03750	0.86	-0.2
1,196,030	-		MPMX19_03750	0.86	-0.5
1,196,030	-		MPMX19_03750	0.86	-0.4
1,196,030	-		MPMX19_03750	0.86	-0.1
1,196,030	-		MPMX19_03750	0.86	-0.8
1,196,030	-		MPMX19_03750	0.86	+0.2
1,196,030	-		MPMX19_03750	0.86	-0.5
1,196,030	-		MPMX19_03750	0.86	+0.2
1,196,137	+				+1.8
1,196,137	+				+1.2
1,196,137	+				-0.2
1,196,137	+				-0.3
1,196,137	+				-0.7
1,196,137	+				-0.2
1,196,137	+				-0.6
1,196,137	+				-0.4
1,196,137	+				-0.2
1,196,137	+				+1.8
1,196,138	-				+1.2
1,196,138	-				-1.5
1,196,138	-				+0.8
1,196,138	-				-1.0
1,196,138	-				+0.9
1,196,138	-				-0.8
1,196,138	-				-0.2
1,196,138	-				-0.2
1,196,138	-				-1.4
1,196,138	-				-0.7
1,196,167	+				-1.1
1,196,168	-				-0.8
1,196,168	-				+0.2
1,196,245	+				-0.9
1,196,245	+				-0.5
1,196,245	+				-0.5
1,196,245	+				+0.2
1,196,245	+				-0.0
1,196,245	+				+0.8
1,196,245	+				-0.7
1,196,246	-				+0.8
1,196,246	-				+0.1
1,196,246	-				-0.5
1,196,348	+				+0.8
1,196,348	+				-1.1
1,196,348	+				+0.5
1,196,349	-				-0.7
1,196,349	-				-1.7
1,196,349	-				+0.5
1,196,349	-				-1.2
1,196,349	-				+1.2
1,196,349	-				-0.4
1,196,372	+				-0.5
1,196,372	+				-1.1
1,196,372	+				+0.1
1,196,372	+				+0.2
1,196,372	+				-1.8
1,196,372	+				-0.0
1,196,372	+				-1.4
1,196,372	+				-2.5
1,196,372	+				-1.2
1,196,372	+				-0.1
1,196,372	+				-0.4
1,196,373	-				+0.2
1,196,373	-				-1.2
1,196,373	-				+0.5
1,196,373	-				-0.1
1,196,373	-				+0.8
1,196,373	-				+0.4
1,196,373	-				+0.6
1,196,705	+		MPMX19_03751	0.31	-0.6
1,196,986	+		MPMX19_03751	0.53	-0.2
1,197,047	+		MPMX19_03751	0.58	-0.3
1,197,047	+		MPMX19_03751	0.58	-0.8
1,197,047	+		MPMX19_03751	0.58	+0.6
1,197,047	+		MPMX19_03751	0.58	-1.3
1,197,047	+		MPMX19_03751	0.58	+0.1
1,197,047	+		MPMX19_03751	0.58	-1.3
1,197,047	+		MPMX19_03751	0.58	-0.7
1,197,047	+		MPMX19_03751	0.58	-0.5
1,197,047	+		MPMX19_03751	0.58	+0.1
1,197,047	+		MPMX19_03751	0.58	-0.8
1,197,047	+		MPMX19_03751	0.58	+1.1
1,197,047	+		MPMX19_03751	0.58	-0.5
1,197,047	+		MPMX19_03751	0.58	+0.2
1,197,047	+		MPMX19_03751	0.58	+1.4
1,197,047	+		MPMX19_03751	0.58	+0.2
1,197,047	+		MPMX19_03751	0.58	-2.3
1,197,047	+		MPMX19_03751	0.58	-0.6
1,197,047	+		MPMX19_03751	0.58	+2.3
1,197,047	+		MPMX19_03751	0.58	+1.4
1,197,047	+		MPMX19_03751	0.58	+1.0
1,197,047	+		MPMX19_03751	0.58	-1.8
1,197,047	+		MPMX19_03751	0.58	-0.8
1,197,047	+		MPMX19_03751	0.58	+0.6
1,197,048	-		MPMX19_03751	0.58	-3.9
1,197,048	-		MPMX19_03751	0.58	-0.9
1,197,048	-		MPMX19_03751	0.58	-0.3
1,197,048	-		MPMX19_03751	0.58	+0.1
1,197,048	-		MPMX19_03751	0.58	-0.2
1,197,048	-		MPMX19_03751	0.58	-1.1
1,197,048	-		MPMX19_03751	0.58	-0.2
1,197,048	-		MPMX19_03751	0.58	-0.5
1,197,048	-		MPMX19_03751	0.58	-0.3
1,197,048	-		MPMX19_03751	0.58	-2.1
1,197,048	-		MPMX19_03751	0.58	+0.3
1,197,048	-		MPMX19_03751	0.58	+0.1
1,197,048	-		MPMX19_03751	0.58	+0.7
1,197,048	-		MPMX19_03751	0.58	-0.2
1,197,185	+		MPMX19_03751	0.68	+0.9
1,197,186	-		MPMX19_03751	0.68	+0.6
1,197,186	-		MPMX19_03751	0.68	-2.4
1,197,186	-		MPMX19_03751	0.68	+1.1
1,197,186	-		MPMX19_03751	0.68	+1.0