Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02488

Experiment: NL-CCM; ambient oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; ambient oxygen
2,607,170	+				-0.2
2,607,170	+				-0.8
2,607,170	+				-0.5
2,607,171	-				-0.7
2,607,268	+				-2.0
2,607,268	+				-0.1
2,607,268	+				-0.7
2,607,268	+				-1.7
2,607,268	+				-2.0
2,607,268	+				-0.1
2,607,268	+				-1.5
2,607,268	+				-0.3
2,607,268	+				+0.7
2,607,268	+				+0.0
2,607,268	+				+0.7
2,607,268	+				-0.2
2,607,268	+				+0.6
2,607,268	+				-0.7
2,607,268	+				-2.0
2,607,268	+				-0.5
2,607,268	+				+0.3
2,607,268	+				-1.5
2,607,268	+				+0.0
2,607,268	+				-1.5
2,607,269	-				-0.4
2,607,269	-				+1.1
2,607,269	-				-1.7
2,607,269	-				+0.0
2,607,269	-				+0.5
2,607,269	-				-2.3
2,607,269	-				+1.7
2,607,269	-				+0.4
2,607,269	-				-0.1
2,607,269	-				-0.4
2,607,269	-				+0.1
2,607,274	+				+0.6
2,607,274	+				+2.2
2,607,274	+				-0.9
2,607,274	+				-0.5
2,607,274	+				-0.3
2,607,274	+				-0.9
2,607,274	+				-0.1
2,607,274	+				+0.7
2,607,275	-				-0.4
2,607,275	-				-0.2
2,607,275	-				-0.7
2,607,275	-				-0.1
2,607,275	-				-0.5
2,607,275	-				-1.4
2,607,275	-				-0.5
2,607,275	-				-0.2
2,607,301	+		MPMX19_02487	0.13	-0.2
2,607,301	+		MPMX19_02487	0.13	-1.3
2,607,301	+		MPMX19_02487	0.13	-0.6
2,607,301	+		MPMX19_02487	0.13	-1.8
2,607,301	+		MPMX19_02487	0.13	-0.4
2,607,301	+		MPMX19_02487	0.13	+0.1
2,607,301	+		MPMX19_02487	0.13	-0.5
2,607,301	+		MPMX19_02487	0.13	-0.7
2,607,301	+		MPMX19_02487	0.13	-0.7
2,607,302	-		MPMX19_02487	0.13	-0.5
2,607,302	-		MPMX19_02487	0.13	+1.1
2,607,302	-		MPMX19_02487	0.13	+0.0
2,607,302	-		MPMX19_02487	0.13	-0.7
2,607,302	-		MPMX19_02487	0.13	-2.1
2,607,435	-		MPMX19_02487	0.28	-0.7
2,607,587	-		MPMX19_02487	0.46	-0.8
2,607,706	+		MPMX19_02487	0.59	+0.9
2,607,707	-		MPMX19_02487	0.60	-0.8
2,607,756	-		MPMX19_02487	0.65	-0.3
2,607,756	-		MPMX19_02487	0.65	+1.0
2,607,756	-		MPMX19_02487	0.65	-0.1
2,607,823	+		MPMX19_02487	0.73	+0.5
2,607,823	+		MPMX19_02487	0.73	-0.8
2,607,823	+		MPMX19_02487	0.73	-0.9
2,607,823	+		MPMX19_02487	0.73	-0.4
2,607,823	+		MPMX19_02487	0.73	+1.9
2,607,823	+		MPMX19_02487	0.73	-0.1
2,607,823	+		MPMX19_02487	0.73	+0.4
2,607,823	+		MPMX19_02487	0.73	-1.3
2,607,823	+		MPMX19_02487	0.73	+0.8
2,607,823	+		MPMX19_02487	0.73	-1.3
2,607,823	+		MPMX19_02487	0.73	-0.3
2,607,823	+		MPMX19_02487	0.73	-0.4
2,607,823	+		MPMX19_02487	0.73	-0.4
2,607,823	+		MPMX19_02487	0.73	-1.5
2,607,823	+		MPMX19_02487	0.73	-0.9
2,607,823	+		MPMX19_02487	0.73	+0.5
2,607,823	+		MPMX19_02487	0.73	+0.3
2,607,823	+		MPMX19_02487	0.73	+0.2
2,607,824	-		MPMX19_02487	0.73	+0.0
2,607,824	-		MPMX19_02487	0.73	-0.6
2,607,824	-		MPMX19_02487	0.73	-0.6
2,607,824	-		MPMX19_02487	0.73	+0.5
2,607,824	-		MPMX19_02487	0.73	-2.2
2,607,824	-		MPMX19_02487	0.73	+0.1
2,607,824	-		MPMX19_02487	0.73	+0.5
2,607,824	-		MPMX19_02487	0.73	+0.3
2,607,943	+		MPMX19_02487	0.87	-1.5
2,607,943	+		MPMX19_02487	0.87	-0.6
2,607,943	+		MPMX19_02487	0.87	-0.4
2,607,943	+		MPMX19_02487	0.87	-0.7
2,607,943	+		MPMX19_02487	0.87	-1.1
2,607,943	+		MPMX19_02487	0.87	-0.1
2,607,943	+		MPMX19_02487	0.87	-0.1
2,607,943	+		MPMX19_02487	0.87	-0.5
2,607,944	-		MPMX19_02487	0.87	-1.5
2,607,944	-		MPMX19_02487	0.87	-0.8
2,607,944	-		MPMX19_02487	0.87	-0.1
2,607,958	+		MPMX19_02487	0.88	+0.7
2,607,959	-		MPMX19_02487	0.89	+0.2
2,607,959	-		MPMX19_02487	0.89	-0.3
2,608,015	+				-0.7
2,608,015	+				+0.2
2,608,015	+				-2.1
2,608,016	-				-2.0
2,608,016	-				+1.1
2,608,016	-				-0.9
2,608,016	-				-0.6
2,608,039	+				-0.4
2,608,039	+				+0.7
2,608,039	+				-1.6
2,608,039	+				+0.5
2,608,039	+				-0.0
2,608,039	+				+0.2
2,608,039	+				+0.3
2,608,039	+				+0.6
2,608,039	+				-2.3
2,608,039	+				+0.7
2,608,039	+				-0.4
2,608,039	+				+0.0
2,608,039	+				-1.0
2,608,040	-				-2.0
2,608,040	-				-1.7
2,608,040	-				-0.5
2,608,040	-				-0.0
2,608,040	-				-0.1
2,608,040	-				-0.6
2,608,040	-				-0.3
2,608,040	-				+0.3
2,608,040	-				-0.4
2,608,040	-				+0.1
2,608,040	-				+0.1
2,608,040	-				-1.1
2,608,107	+				-1.8
2,608,107	+				-1.7
2,608,107	+				-0.1
2,608,107	+				-0.3
2,608,108	-				+0.2
2,608,108	-				+0.5
2,608,108	-				-0.6
2,608,108	-				+0.1
2,608,108	-				-0.6
2,608,108	-				-0.1
2,608,113	+				-1.8
2,608,113	+				-0.4
2,608,113	+				+0.7
2,608,114	-				+0.0
2,608,114	-				-0.6
2,608,114	-				+1.8
2,608,114	-				+0.1
2,608,114	-				-1.7
2,608,114	-				-0.0
2,608,126	+				-0.3
2,608,126	+				-0.2
2,608,126	+				-0.8
2,608,127	-				-2.6
2,608,127	-				-2.1
2,608,162	+				-0.4
2,608,162	+				+0.5
2,608,162	+				+0.8
2,608,162	+				-1.1
2,608,162	+				+0.9
2,608,162	+				-0.3
2,608,162	+				-1.3
2,608,162	+				-0.9
2,608,162	+				-1.2
2,608,163	-				-0.4
2,608,163	-				+0.7
2,608,163	-				+0.3
2,608,163	-				-0.3
2,608,163	-				+0.3
2,608,163	-				+0.0
2,608,246	+		MPMX19_02488	0.22	+1.6
2,608,246	+		MPMX19_02488	0.22	+0.6
2,608,246	+		MPMX19_02488	0.22	+1.9
2,608,246	+		MPMX19_02488	0.22	+0.1
2,608,247	-		MPMX19_02488	0.22	-1.4
2,608,247	-		MPMX19_02488	0.22	+0.3
2,608,247	-		MPMX19_02488	0.22	-0.9
2,608,803	+				+0.2
2,608,804	-				-2.3
2,608,841	+				+1.9
2,608,841	+				-0.2
2,608,841	+				-0.9
2,608,842	-				-1.1
2,608,847	+				-0.5
2,608,847	+				+0.1
2,608,847	+				+0.0
2,608,847	+				-1.4
2,608,847	+				-1.2
2,608,847	+				-0.1
2,608,847	+				-0.7
2,608,847	+				+0.1
2,608,847	+				-0.9
2,608,847	+				+0.2
2,608,847	+				+0.1
2,608,847	+				+0.5
2,608,847	+				-1.5
2,608,847	+				+0.7
2,608,848	-				-0.3
2,608,848	-				-1.3
2,608,848	-				-1.6
2,608,848	-				-1.1
2,608,848	-				-1.3
2,608,848	-				-1.3
2,608,848	-				-0.9
2,608,848	-				-0.1
2,608,848	-				+0.6
2,608,848	-				-0.5
2,608,848	-				-0.5
2,608,848	-				-0.4
2,608,848	-				-0.3
2,608,848	-				+1.9
2,608,848	-				-0.4
2,608,848	-				-0.9
2,608,848	-				+1.8
2,608,848	-				+0.9
2,608,848	-				-0.6
2,608,848	-				+0.5
2,608,848	-				-0.8
2,608,951	+		MPMX19_02489	0.17	-0.1
2,608,951	+		MPMX19_02489	0.17	-0.4
2,608,951	+		MPMX19_02489	0.17	-0.1
2,608,951	+		MPMX19_02489	0.17	-0.1
2,608,951	+		MPMX19_02489	0.17	+0.1
2,608,951	+		MPMX19_02489	0.17	+0.5
2,608,951	+		MPMX19_02489	0.17	-1.1
2,608,951	+		MPMX19_02489	0.17	+1.2
2,608,951	+		MPMX19_02489	0.17	-1.5
2,608,951	+		MPMX19_02489	0.17	+0.7
2,608,951	+		MPMX19_02489	0.17	+0.9
2,608,951	+		MPMX19_02489	0.17	-1.4
2,608,951	+		MPMX19_02489	0.17	-1.1
2,608,951	+		MPMX19_02489	0.17	+0.1
2,608,951	+		MPMX19_02489	0.17	-1.7
2,608,951	+		MPMX19_02489	0.17	-2.1
2,608,951	+		MPMX19_02489	0.17	+1.2
2,608,951	+		MPMX19_02489	0.17	-1.1
2,608,951	+		MPMX19_02489	0.17	-0.1
2,608,952	-		MPMX19_02489	0.17	+1.4
2,608,952	-		MPMX19_02489	0.17	-2.0
2,608,952	-		MPMX19_02489	0.17	-0.5
2,608,952	-		MPMX19_02489	0.17	-2.9
2,608,952	-		MPMX19_02489	0.17	+0.5
2,608,952	-		MPMX19_02489	0.17	+1.9
2,608,952	-		MPMX19_02489	0.17	-0.1
2,608,952	-		MPMX19_02489	0.17	-0.9
2,608,952	-		MPMX19_02489	0.17	+0.5
2,608,952	-		MPMX19_02489	0.17	+0.3
2,608,952	-		MPMX19_02489	0.17	+0.2
2,608,952	-		MPMX19_02489	0.17	-0.3
2,608,952	-		MPMX19_02489	0.17	-1.6
2,608,952	-		MPMX19_02489	0.17	-1.4
2,608,952	-		MPMX19_02489	0.17	+0.1
2,608,952	-		MPMX19_02489	0.17	-0.4
2,608,952	-		MPMX19_02489	0.17	-1.1
2,608,952	-		MPMX19_02489	0.17	-2.7
2,608,952	-		MPMX19_02489	0.17	+0.8
2,608,954	+		MPMX19_02489	0.18	-0.4
2,608,954	+		MPMX19_02489	0.18	-1.3
2,608,954	+		MPMX19_02489	0.18	+1.0
2,608,954	+		MPMX19_02489	0.18	-1.4
2,608,954	+		MPMX19_02489	0.18	+0.5
2,608,954	+		MPMX19_02489	0.18	-1.7
2,608,954	+		MPMX19_02489	0.18	+0.6
2,608,954	+		MPMX19_02489	0.18	+0.0
2,608,954	+		MPMX19_02489	0.18	-1.5
2,608,954	+		MPMX19_02489	0.18	+0.6
2,608,954	+		MPMX19_02489	0.18	+0.9
2,608,954	+		MPMX19_02489	0.18	+0.9
2,608,954	+		MPMX19_02489	0.18	-1.5
2,608,954	+		MPMX19_02489	0.18	-0.7
2,608,954	+		MPMX19_02489	0.18	+0.3
2,608,954	+		MPMX19_02489	0.18	+0.9
2,608,955	-		MPMX19_02489	0.18	+0.9
2,608,955	-		MPMX19_02489	0.18	-0.4
2,608,955	-		MPMX19_02489	0.18	+0.7
2,608,955	-		MPMX19_02489	0.18	+0.9
2,608,955	-		MPMX19_02489	0.18	+1.9
2,608,955	-		MPMX19_02489	0.18	-0.4
2,608,955	-		MPMX19_02489	0.18	+0.2
2,608,955	-		MPMX19_02489	0.18	+0.9
2,608,955	-		MPMX19_02489	0.18	+1.3
2,609,074	+		MPMX19_02489	0.41	+0.4
2,609,074	+		MPMX19_02489	0.41	+0.9
2,609,074	+		MPMX19_02489	0.41	-0.5
2,609,074	+		MPMX19_02489	0.41	+0.1
2,609,074	+		MPMX19_02489	0.41	+0.3
2,609,074	+		MPMX19_02489	0.41	-0.7
2,609,074	+		MPMX19_02489	0.41	+2.5
2,609,074	+		MPMX19_02489	0.41	-0.7
2,609,074	+		MPMX19_02489	0.41	-0.5
2,609,074	+		MPMX19_02489	0.41	-0.9
2,609,074	+		MPMX19_02489	0.41	-0.7
2,609,074	+		MPMX19_02489	0.41	+1.1
2,609,074	+		MPMX19_02489	0.41	-1.1
2,609,074	+		MPMX19_02489	0.41	-0.4
2,609,074	+		MPMX19_02489	0.41	-1.1
2,609,074	+		MPMX19_02489	0.41	+1.3
2,609,074	+		MPMX19_02489	0.41	+0.3
2,609,074	+		MPMX19_02489	0.41	+1.3
2,609,075	-		MPMX19_02489	0.41	+0.7
2,609,075	-		MPMX19_02489	0.41	+1.5
2,609,075	-		MPMX19_02489	0.41	-1.4
2,609,075	-		MPMX19_02489	0.41	+1.3
2,609,075	-		MPMX19_02489	0.41	+2.5
2,609,075	-		MPMX19_02489	0.41	-0.3
2,609,075	-		MPMX19_02489	0.41	+0.9
2,609,075	-		MPMX19_02489	0.41	-0.3
2,609,075	-		MPMX19_02489	0.41	+1.1
2,609,075	-		MPMX19_02489	0.41	+1.0
2,609,075	-		MPMX19_02489	0.41	-0.3
2,609,075	-		MPMX19_02489	0.41	-1.2
2,609,075	-		MPMX19_02489	0.41	+0.3
2,609,075	-		MPMX19_02489	0.41	-0.1
2,609,075	-		MPMX19_02489	0.41	+1.0
2,609,075	-		MPMX19_02489	0.41	-0.9
2,609,075	-		MPMX19_02489	0.41	-1.4
2,609,075	-		MPMX19_02489	0.41	+0.7
2,609,263	+		MPMX19_02489	0.77	+1.9
2,609,263	+		MPMX19_02489	0.77	-0.9
2,609,263	+		MPMX19_02489	0.77	+0.6
2,609,263	+		MPMX19_02489	0.77	-1.4
2,609,263	+		MPMX19_02489	0.77	-1.3
2,609,263	+		MPMX19_02489	0.77	-0.9
2,609,263	+		MPMX19_02489	0.77	-0.1
2,609,264	-		MPMX19_02489	0.77	-0.4
2,609,264	-		MPMX19_02489	0.77	-0.4
2,609,264	-		MPMX19_02489	0.77	-0.4
2,609,264	-		MPMX19_02489	0.77	+0.9
2,609,264	-		MPMX19_02489	0.77	-3.3
2,609,264	-		MPMX19_02489	0.77	-1.5
2,609,264	-		MPMX19_02489	0.77	-1.7
2,609,264	-		MPMX19_02489	0.77	-0.9
2,609,264	-		MPMX19_02489	0.77	-1.0
2,609,264	-		MPMX19_02489	0.77	-0.7
2,609,327	+		MPMX19_02489	0.89	+1.9
2,609,327	+		MPMX19_02489	0.89	-0.9
2,609,327	+		MPMX19_02489	0.89	-1.4
2,609,328	-		MPMX19_02489	0.90	+0.1
2,609,328	-		MPMX19_02489	0.90	-1.5
2,609,328	-		MPMX19_02489	0.90	-1.1
2,609,387	+				-0.4
2,609,387	+				-0.5
2,609,388	-				-0.5
2,609,388	-				-0.5
2,609,388	-				-0.3
2,609,401	+				-0.3
2,609,401	+				+0.3
2,609,401	+				-1.3
2,609,402	-				-0.1
2,609,402	-				+0.9
2,609,402	-				-0.9
2,609,402	-				-1.5
2,609,402	-				-0.1
2,609,470	+				-0.7
2,609,470	+				-0.9
2,609,470	+				-1.5
2,609,470	+				-3.1
2,609,470	+				-0.3
2,609,470	+				-1.9
2,609,471	-				-0.7
2,609,471	-				-1.9
2,609,471	-				-1.8
2,609,471	-				-0.7
2,609,471	-				-2.2
2,609,471	-				+0.3
2,609,471	-				-1.4
2,609,471	-				-1.3
2,609,471	-				-0.2
2,609,471	-				-0.3
2,609,471	-				-0.3
2,609,574	+		MPMX19_02490	0.22	-0.3
2,609,575	-		MPMX19_02490	0.22	+1.1
2,609,575	-		MPMX19_02490	0.22	-0.1
2,609,575	-		MPMX19_02490	0.22	-0.7
2,609,596	+		MPMX19_02490	0.25	-1.9
2,609,596	+		MPMX19_02490	0.25	-1.1
2,609,596	+		MPMX19_02490	0.25	-1.8
2,609,596	+		MPMX19_02490	0.25	-0.4
2,609,596	+		MPMX19_02490	0.25	-0.8
2,609,596	+		MPMX19_02490	0.25	+0.7
2,609,596	+		MPMX19_02490	0.25	-0.4
2,609,596	+		MPMX19_02490	0.25	-1.5
2,609,596	+		MPMX19_02490	0.25	+0.2
2,609,596	+		MPMX19_02490	0.25	-1.1
2,609,596	+		MPMX19_02490	0.25	-0.9
2,609,596	+		MPMX19_02490	0.25	+0.3
2,609,596	+		MPMX19_02490	0.25	+0.2
2,609,596	+		MPMX19_02490	0.25	+0.5
2,609,596	+		MPMX19_02490	0.25	-0.2
2,609,596	+		MPMX19_02490	0.25	+0.1
2,609,597	-		MPMX19_02490	0.25	-1.6
2,609,597	-		MPMX19_02490	0.25	+0.3
2,609,597	-		MPMX19_02490	0.25	+0.6
2,609,597	-		MPMX19_02490	0.25	-0.4
2,609,597	-		MPMX19_02490	0.25	-0.9
2,609,597	-		MPMX19_02490	0.25	-1.1
2,609,597	-		MPMX19_02490	0.25	-0.7
2,609,597	-		MPMX19_02490	0.25	-0.2
2,609,597	-		MPMX19_02490	0.25	+0.4
2,609,597	-		MPMX19_02490	0.25	+0.0
2,609,597	-		MPMX19_02490	0.25	-1.5
2,609,597	-		MPMX19_02490	0.25	-0.3
2,609,597	-		MPMX19_02490	0.25	-1.5
2,609,597	-		MPMX19_02490	0.25	+0.5
2,609,597	-		MPMX19_02490	0.25	+0.7
2,609,597	-		MPMX19_02490	0.25	-0.1
2,609,597	-		MPMX19_02490	0.25	+0.6
2,609,597	-		MPMX19_02490	0.25	-1.0
2,609,597	-		MPMX19_02490	0.25	+1.0
2,609,597	-		MPMX19_02490	0.25	+0.1
2,609,597	-		MPMX19_02490	0.25	+0.1
2,609,597	-		MPMX19_02490	0.25	-0.7
2,609,597	-		MPMX19_02490	0.25	-0.5
2,609,597	-		MPMX19_02490	0.25	-1.0
2,609,597	-		MPMX19_02490	0.25	+0.9
2,609,597	-		MPMX19_02490	0.25	-0.7
2,609,626	+		MPMX19_02490	0.29	-1.0
2,609,626	+		MPMX19_02490	0.29	+0.2
2,609,626	+		MPMX19_02490	0.29	+0.3
2,609,626	+		MPMX19_02490	0.29	-1.5
2,609,626	+		MPMX19_02490	0.29	-0.3
2,609,626	+		MPMX19_02490	0.29	-1.8
2,609,626	+		MPMX19_02490	0.29	-0.5
2,609,626	+		MPMX19_02490	0.29	-1.3
2,609,626	+		MPMX19_02490	0.29	-0.5
2,609,626	+		MPMX19_02490	0.29	-1.6
2,609,626	+		MPMX19_02490	0.29	-1.1
2,609,626	+		MPMX19_02490	0.29	-0.5
2,609,626	+		MPMX19_02490	0.29	-0.3
2,609,626	+		MPMX19_02490	0.29	-0.9
2,609,627	-		MPMX19_02490	0.29	-0.1
2,609,627	-		MPMX19_02490	0.29	-0.9
2,609,627	-		MPMX19_02490	0.29	+0.7
2,609,627	-		MPMX19_02490	0.29	-0.6
2,609,627	-		MPMX19_02490	0.29	-1.7
2,609,627	-		MPMX19_02490	0.29	+0.2
2,609,627	-		MPMX19_02490	0.29	+0.0
2,609,627	-		MPMX19_02490	0.29	+0.5
2,609,627	-		MPMX19_02490	0.29	-0.1
2,609,627	-		MPMX19_02490	0.29	+0.3
2,609,627	-		MPMX19_02490	0.29	-0.4
2,609,627	-		MPMX19_02490	0.29	-0.2
2,609,627	-		MPMX19_02490	0.29	-0.8
2,609,627	-		MPMX19_02490	0.29	-1.2