Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02061

Experiment: NL-CCM; ambient oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; ambient oxygen
2,154,516	+		MPMX19_02060	0.30	-1.0
2,154,516	+		MPMX19_02060	0.30	+1.0
2,154,516	+		MPMX19_02060	0.30	-0.3
2,154,516	+		MPMX19_02060	0.30	-0.1
2,154,516	+		MPMX19_02060	0.30	-0.2
2,154,516	+		MPMX19_02060	0.30	-2.3
2,154,516	+		MPMX19_02060	0.30	+1.5
2,154,517	-		MPMX19_02060	0.30	+0.2
2,154,517	-		MPMX19_02060	0.30	-0.8
2,154,517	-		MPMX19_02060	0.30	+0.6
2,154,517	-		MPMX19_02060	0.30	-0.5
2,154,517	-		MPMX19_02060	0.30	-2.7
2,154,517	-		MPMX19_02060	0.30	+0.2
2,154,517	-		MPMX19_02060	0.30	+1.1
2,154,517	-		MPMX19_02060	0.30	-1.4
2,154,517	-		MPMX19_02060	0.30	-1.0
2,154,517	-		MPMX19_02060	0.30	-1.0
2,154,517	-		MPMX19_02060	0.30	+0.6
2,154,552	+		MPMX19_02060	0.34	-0.4
2,154,552	+		MPMX19_02060	0.34	-0.9
2,154,552	+		MPMX19_02060	0.34	-1.9
2,154,552	+		MPMX19_02060	0.34	-0.8
2,154,552	+		MPMX19_02060	0.34	-0.5
2,154,552	+		MPMX19_02060	0.34	-0.7
2,154,553	-		MPMX19_02060	0.34	-0.5
2,154,553	-		MPMX19_02060	0.34	+0.5
2,154,553	-		MPMX19_02060	0.34	+0.9
2,154,553	-		MPMX19_02060	0.34	-0.0
2,154,553	-		MPMX19_02060	0.34	-1.5
2,154,553	-		MPMX19_02060	0.34	+0.1
2,154,553	-		MPMX19_02060	0.34	-1.4
2,155,910	+		MPMX19_02061	0.28	-0.4
2,155,910	+		MPMX19_02061	0.28	+0.2
2,155,910	+		MPMX19_02061	0.28	-0.3
2,155,911	-		MPMX19_02061	0.28	-1.3
2,156,105	+		MPMX19_02061	0.36	+0.6
2,156,105	+		MPMX19_02061	0.36	-0.3
2,156,105	+		MPMX19_02061	0.36	-0.2
2,156,105	+		MPMX19_02061	0.36	-1.0
2,156,106	-		MPMX19_02061	0.36	-1.2
2,156,106	-		MPMX19_02061	0.36	-2.1
2,156,422	+		MPMX19_02061	0.48	-0.2
2,156,422	+		MPMX19_02061	0.48	+0.1
2,156,422	+		MPMX19_02061	0.48	-1.2
2,156,423	-		MPMX19_02061	0.48	-1.0
2,156,423	-		MPMX19_02061	0.48	-0.2
2,156,423	-		MPMX19_02061	0.48	-0.3
2,156,423	-		MPMX19_02061	0.48	-0.8
2,156,423	-		MPMX19_02061	0.48	-1.8
2,156,572	+		MPMX19_02061	0.54	-0.1
2,156,573	-		MPMX19_02061	0.54	-0.4
2,156,573	-		MPMX19_02061	0.54	+0.6
2,156,573	-		MPMX19_02061	0.54	+0.6
2,156,573	-		MPMX19_02061	0.54	+0.1
2,156,635	+		MPMX19_02061	0.56	-1.2
2,156,635	+		MPMX19_02061	0.56	+1.8
2,156,635	+		MPMX19_02061	0.56	+1.5
2,156,635	+		MPMX19_02061	0.56	-0.2
2,156,635	+		MPMX19_02061	0.56	-1.4
2,156,635	+		MPMX19_02061	0.56	+0.8
2,156,635	+		MPMX19_02061	0.56	-0.3
2,156,635	+		MPMX19_02061	0.56	-0.4
2,156,635	+		MPMX19_02061	0.56	-0.5
2,156,635	+		MPMX19_02061	0.56	-1.0
2,156,635	+		MPMX19_02061	0.56	+1.6
2,156,635	+		MPMX19_02061	0.56	-0.5
2,156,635	+		MPMX19_02061	0.56	-1.3
2,156,635	+		MPMX19_02061	0.56	+0.2
2,156,635	+		MPMX19_02061	0.56	-0.1
2,156,635	+		MPMX19_02061	0.56	-1.0
2,156,635	+		MPMX19_02061	0.56	+0.1
2,156,635	+		MPMX19_02061	0.56	+0.2
2,156,635	+		MPMX19_02061	0.56	-0.4
2,156,635	+		MPMX19_02061	0.56	-2.9
2,156,635	+		MPMX19_02061	0.56	-0.5
2,156,635	+		MPMX19_02061	0.56	-0.8
2,156,635	+		MPMX19_02061	0.56	-0.6
2,156,635	+		MPMX19_02061	0.56	+0.5
2,156,635	+		MPMX19_02061	0.56	-1.0
2,156,635	+		MPMX19_02061	0.56	+0.2
2,156,635	+		MPMX19_02061	0.56	-0.2
2,156,635	+		MPMX19_02061	0.56	-1.0
2,156,635	+		MPMX19_02061	0.56	-0.0
2,156,635	+		MPMX19_02061	0.56	-0.0
2,156,635	+		MPMX19_02061	0.56	+0.0
2,156,635	+		MPMX19_02061	0.56	-1.0
2,156,635	+		MPMX19_02061	0.56	+0.4
2,156,635	+		MPMX19_02061	0.56	-0.2
2,156,636	-		MPMX19_02061	0.56	+0.6
2,156,636	-		MPMX19_02061	0.56	-0.8
2,156,636	-		MPMX19_02061	0.56	+0.6
2,156,636	-		MPMX19_02061	0.56	+0.6
2,156,636	-		MPMX19_02061	0.56	-1.8
2,156,636	-		MPMX19_02061	0.56	-1.0
2,156,636	-		MPMX19_02061	0.56	+0.3
2,156,636	-		MPMX19_02061	0.56	-2.0
2,156,636	-		MPMX19_02061	0.56	-0.4
2,156,636	-		MPMX19_02061	0.56	+1.1
2,156,636	-		MPMX19_02061	0.56	-0.1
2,156,636	-		MPMX19_02061	0.56	-0.4
2,156,636	-		MPMX19_02061	0.56	-0.4
2,156,636	-		MPMX19_02061	0.56	+0.6
2,156,636	-		MPMX19_02061	0.56	-1.2
2,156,636	-		MPMX19_02061	0.56	+0.6
2,156,636	-		MPMX19_02061	0.56	-0.1
2,156,636	-		MPMX19_02061	0.56	-1.0
2,156,636	-		MPMX19_02061	0.56	-0.3
2,156,636	-		MPMX19_02061	0.56	-1.5
2,156,636	-		MPMX19_02061	0.56	+0.8
2,156,636	-		MPMX19_02061	0.56	-0.4
2,156,636	-		MPMX19_02061	0.56	-2.2
2,156,636	-		MPMX19_02061	0.56	-0.7
2,156,636	-		MPMX19_02061	0.56	-0.7
2,156,636	-		MPMX19_02061	0.56	+0.5
2,156,636	-		MPMX19_02061	0.56	+0.1
2,156,636	-		MPMX19_02061	0.56	-0.2
2,156,636	-		MPMX19_02061	0.56	-1.5
2,156,636	-		MPMX19_02061	0.56	-0.1
2,156,636	-		MPMX19_02061	0.56	-0.9
2,156,636	-		MPMX19_02061	0.56	+0.4
2,156,636	-		MPMX19_02061	0.56	+0.8
2,156,636	-		MPMX19_02061	0.56	-0.1
2,156,636	-		MPMX19_02061	0.56	-1.2
2,156,636	-		MPMX19_02061	0.56	-0.2
2,156,800	+		MPMX19_02061	0.62	-1.7
2,156,800	+		MPMX19_02061	0.62	+0.6
2,156,800	+		MPMX19_02061	0.62	-0.7
2,156,896	+		MPMX19_02061	0.66	-0.8
2,156,896	+		MPMX19_02061	0.66	+0.2
2,156,896	+		MPMX19_02061	0.66	-0.0
2,156,896	+		MPMX19_02061	0.66	-0.6
2,156,896	+		MPMX19_02061	0.66	-1.3
2,156,896	+		MPMX19_02061	0.66	-0.7
2,156,896	+		MPMX19_02061	0.66	+0.8
2,156,897	-		MPMX19_02061	0.66	+0.7
2,156,897	-		MPMX19_02061	0.66	+0.8
2,156,897	-		MPMX19_02061	0.66	+1.0
2,156,897	-		MPMX19_02061	0.66	-1.2
2,156,897	-		MPMX19_02061	0.66	-0.3
2,156,897	-		MPMX19_02061	0.66	+0.6
2,157,041	+		MPMX19_02061	0.72	+1.8
2,157,042	-		MPMX19_02061	0.72	+0.4
2,157,076	+		MPMX19_02061	0.73	-1.0
2,157,076	+		MPMX19_02061	0.73	+0.6
2,157,076	+		MPMX19_02061	0.73	-0.2
2,157,076	+		MPMX19_02061	0.73	-0.1
2,157,076	+		MPMX19_02061	0.73	+0.4
2,157,076	+		MPMX19_02061	0.73	-1.5
2,157,076	+		MPMX19_02061	0.73	+0.5
2,157,076	+		MPMX19_02061	0.73	+0.8
2,157,076	+		MPMX19_02061	0.73	+0.6
2,157,076	+		MPMX19_02061	0.73	-0.4
2,157,076	+		MPMX19_02061	0.73	-0.0
2,157,077	-		MPMX19_02061	0.73	+1.4
2,157,077	-		MPMX19_02061	0.73	-0.5
2,157,077	-		MPMX19_02061	0.73	-0.5
2,157,077	-		MPMX19_02061	0.73	-0.1
2,157,077	-		MPMX19_02061	0.73	-0.7
2,157,077	-		MPMX19_02061	0.73	-0.5
2,157,077	-		MPMX19_02061	0.73	-0.6
2,157,077	-		MPMX19_02061	0.73	+0.2
2,157,077	-		MPMX19_02061	0.73	-0.8
2,157,077	-		MPMX19_02061	0.73	-0.2
2,157,584	+				+0.1
2,157,584	+				-0.2
2,157,655	+				+0.3
2,157,655	+				-1.2
2,157,655	+				+0.6
2,157,655	+				-0.6
2,157,655	+				+0.3
2,157,655	+				-0.2
2,157,655	+				-0.2
2,157,655	+				-0.2
2,157,655	+				-0.5
2,157,656	-				-1.5
2,157,656	-				-1.9
2,157,656	-				-0.2
2,157,656	-				+0.4
2,157,656	-				-0.1
2,157,656	-				+0.2
2,157,694	+				+1.3
2,157,694	+				-1.6
2,157,694	+				+0.1
2,157,694	+				-1.0
2,157,694	+				+0.6
2,157,694	+				-0.4
2,157,694	+				-0.4
2,157,695	-				-1.0
2,157,695	-				+0.7
2,157,695	-				-0.1
2,157,695	-				+0.5
2,157,695	-				-1.0
2,157,695	-				-1.4
2,157,695	-				-0.4
2,157,695	-				-1.3
2,157,695	-				-0.8
2,157,695	-				-0.5
2,157,695	-				-0.5
2,157,695	-				-0.0
2,157,742	+				-0.5
2,157,742	+				-0.2
2,157,742	+				+1.8
2,157,742	+				-1.7
2,157,742	+				-0.9
2,157,742	+				-1.1
2,157,743	-				-1.4
2,157,743	-				-1.4
2,157,743	-				-0.4
2,157,743	-				-0.8
2,157,743	-				+0.7
2,157,743	-				-1.5
2,157,809	+				+0.2
2,157,809	+				-0.4
2,157,809	+				+0.1
2,157,809	+				-0.9
2,157,809	+				+0.8
2,157,809	+				-0.0
2,157,809	+				+0.2
2,157,809	+				-1.2
2,157,810	-				-2.1
2,157,810	-				+0.8
2,157,810	-				-0.2
2,157,810	-				-1.3
2,157,810	-				+1.2
2,157,810	-				+0.1
2,157,810	-				-0.6
2,157,810	-				-1.0
2,157,810	-				-0.8
2,157,811	+				-0.3
2,157,811	+				-0.6
2,157,811	+				-0.7
2,157,838	+				-0.1
2,157,838	+				-0.4
2,158,337	+		MPMX19_02062	0.66	+0.2
2,158,337	+		MPMX19_02062	0.66	-0.9
2,158,337	+		MPMX19_02062	0.66	+0.9
2,158,337	+		MPMX19_02062	0.66	+0.4
2,158,337	+		MPMX19_02062	0.66	-0.4
2,158,337	+		MPMX19_02062	0.66	-0.5
2,158,337	+		MPMX19_02062	0.66	-0.5
2,158,337	+		MPMX19_02062	0.66	-0.7
2,158,337	+		MPMX19_02062	0.66	-0.2
2,158,338	-		MPMX19_02062	0.66	-0.5
2,158,338	-		MPMX19_02062	0.66	-0.1
2,158,338	-		MPMX19_02062	0.66	-0.1
2,158,338	-		MPMX19_02062	0.66	+0.5
2,158,338	-		MPMX19_02062	0.66	-1.2
2,158,338	-		MPMX19_02062	0.66	+0.0
2,158,338	-		MPMX19_02062	0.66	+0.8
2,158,433	+		MPMX19_02062	0.80	+1.3
2,158,433	+		MPMX19_02062	0.80	-1.4
2,158,434	-		MPMX19_02062	0.80	+1.8
2,158,434	-		MPMX19_02062	0.80	-2.6
2,158,523	+				-1.2
2,158,523	+				-0.5
2,158,524	-				-1.7
2,158,544	+				-1.8
2,158,544	+				-0.5
2,158,544	+				+0.1
2,158,544	+				+2.1
2,158,544	+				+0.8
2,158,544	+				-1.0
2,158,544	+				-2.0
2,158,544	+				-1.0
2,158,544	+				-3.0
2,158,544	+				+0.6
2,158,544	+				+0.2
2,158,544	+				-0.7
2,158,544	+				-0.0
2,158,544	+				-1.0
2,158,544	+				-0.2
2,158,544	+				-0.5
2,158,544	+				+0.2
2,158,544	+				-1.6
2,158,544	+				+0.8
2,158,544	+				-1.4
2,158,544	+				+0.1
2,158,544	+				-0.1
2,158,544	+				+0.8
2,158,544	+				-0.7
2,158,545	-				+0.0
2,158,545	-				-1.0
2,158,545	-				-0.6
2,158,545	-				-0.1
2,158,545	-				-0.3
2,158,545	-				+0.5
2,158,545	-				-0.6
2,158,545	-				+0.2
2,158,545	-				-1.1
2,158,545	-				-1.3
2,158,545	-				-1.5
2,158,545	-				+0.6
2,158,545	-				+0.2
2,158,545	-				+0.2
2,158,545	-				-0.3
2,158,545	-				-1.0
2,158,545	-				-0.4
2,158,545	-				-1.3
2,158,545	-				-0.6
2,158,610	+				-0.6
2,158,610	+				+0.1
2,158,610	+				-1.9
2,158,610	+				-0.6
2,158,611	-				+0.1
2,158,611	-				+2.6
2,158,611	-				+0.2
2,158,611	-				-1.2
2,158,611	-				+0.8
2,158,611	-				-0.5
2,158,611	-				-0.4
2,158,611	-				-0.1
2,158,625	+				-1.4
2,158,625	+				-0.5
2,158,625	+				-1.9
2,158,625	+				-0.1
2,158,625	+				-0.4
2,158,625	+				+1.3
2,158,626	-				-0.4
2,158,626	-				-0.8
2,158,626	-				+1.0
2,158,626	-				+0.4
2,158,626	-				-0.4
2,158,626	-				-1.8
2,158,678	+				-1.0
2,158,678	+				-1.7
2,158,678	+				-0.9
2,158,678	+				+1.4
2,158,678	+				+0.1
2,158,678	+				-0.1
2,158,678	+				+0.3
2,158,678	+				-0.1
2,158,679	-				-1.1
2,158,679	-				+0.8
2,158,679	-				-0.5
2,158,679	-				-1.7
2,158,679	-				-0.1
2,158,703	+		MPMX19_02063	0.13	-0.2
2,158,703	+		MPMX19_02063	0.13	+1.4
2,158,703	+		MPMX19_02063	0.13	-0.8
2,158,703	+		MPMX19_02063	0.13	-0.9
2,158,703	+		MPMX19_02063	0.13	-0.9
2,158,704	-		MPMX19_02063	0.13	-0.3
2,158,704	-		MPMX19_02063	0.13	-0.5
2,158,704	-		MPMX19_02063	0.13	-1.5