Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01954

Experiment: NL-CCM; ambient oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; ambient oxygen
2,036,025	+		MPMX19_01953	0.54	-1.1
2,036,025	+		MPMX19_01953	0.54	-2.3
2,036,025	+		MPMX19_01953	0.54	-1.2
2,036,025	+		MPMX19_01953	0.54	-1.0
2,036,025	+		MPMX19_01953	0.54	-1.3
2,036,025	+		MPMX19_01953	0.54	+0.3
2,036,025	+		MPMX19_01953	0.54	-2.0
2,036,025	+		MPMX19_01953	0.54	-0.8
2,036,025	+		MPMX19_01953	0.54	-0.4
2,036,025	+		MPMX19_01953	0.54	-2.0
2,036,025	+		MPMX19_01953	0.54	-0.5
2,036,025	+		MPMX19_01953	0.54	-0.2
2,036,025	+		MPMX19_01953	0.54	-0.8
2,036,025	+		MPMX19_01953	0.54	-1.1
2,036,026	-		MPMX19_01953	0.54	+0.7
2,036,026	-		MPMX19_01953	0.54	+0.0
2,036,026	-		MPMX19_01953	0.54	-0.1
2,036,026	-		MPMX19_01953	0.54	-0.4
2,036,026	-		MPMX19_01953	0.54	+0.2
2,036,026	-		MPMX19_01953	0.54	-0.9
2,036,026	-		MPMX19_01953	0.54	-1.6
2,036,026	-		MPMX19_01953	0.54	+0.6
2,036,026	-		MPMX19_01953	0.54	+0.9
2,036,026	-		MPMX19_01953	0.54	-1.0
2,036,026	-		MPMX19_01953	0.54	-1.6
2,036,038	+		MPMX19_01953	0.55	-1.0
2,036,038	+		MPMX19_01953	0.55	-0.6
2,036,038	+		MPMX19_01953	0.55	-0.1
2,036,038	+		MPMX19_01953	0.55	+0.6
2,036,038	+		MPMX19_01953	0.55	-3.0
2,036,038	+		MPMX19_01953	0.55	+1.0
2,036,038	+		MPMX19_01953	0.55	-1.1
2,036,038	+		MPMX19_01953	0.55	+0.4
2,036,038	+		MPMX19_01953	0.55	-1.5
2,036,038	+		MPMX19_01953	0.55	+1.3
2,036,038	+		MPMX19_01953	0.55	-0.6
2,036,038	+		MPMX19_01953	0.55	-2.1
2,036,038	+		MPMX19_01953	0.55	-0.3
2,036,038	+		MPMX19_01953	0.55	-0.7
2,036,038	+		MPMX19_01953	0.55	+0.0
2,036,038	+		MPMX19_01953	0.55	-0.6
2,036,038	+		MPMX19_01953	0.55	-0.1
2,036,038	+		MPMX19_01953	0.55	-1.4
2,036,038	+		MPMX19_01953	0.55	+0.7
2,036,038	+		MPMX19_01953	0.55	+0.2
2,036,038	+		MPMX19_01953	0.55	-0.7
2,036,038	+		MPMX19_01953	0.55	-0.9
2,036,038	+		MPMX19_01953	0.55	-1.3
2,036,038	+		MPMX19_01953	0.55	-0.4
2,036,038	+		MPMX19_01953	0.55	+0.3
2,036,038	+		MPMX19_01953	0.55	-0.7
2,036,038	+		MPMX19_01953	0.55	+2.0
2,036,038	+		MPMX19_01953	0.55	-0.3
2,036,038	+		MPMX19_01953	0.55	-0.5
2,036,038	+		MPMX19_01953	0.55	-0.1
2,036,038	+		MPMX19_01953	0.55	+1.1
2,036,038	+		MPMX19_01953	0.55	+0.1
2,036,038	+		MPMX19_01953	0.55	-0.3
2,036,038	+		MPMX19_01953	0.55	-1.3
2,036,038	+		MPMX19_01953	0.55	+0.0
2,036,038	+		MPMX19_01953	0.55	-1.1
2,036,039	-		MPMX19_01953	0.55	+0.4
2,036,039	-		MPMX19_01953	0.55	+0.9
2,036,039	-		MPMX19_01953	0.55	+0.7
2,036,039	-		MPMX19_01953	0.55	-0.3
2,036,039	-		MPMX19_01953	0.55	-1.2
2,036,039	-		MPMX19_01953	0.55	-2.5
2,036,039	-		MPMX19_01953	0.55	+0.4
2,036,039	-		MPMX19_01953	0.55	-1.4
2,036,039	-		MPMX19_01953	0.55	+0.5
2,036,039	-		MPMX19_01953	0.55	+0.4
2,036,039	-		MPMX19_01953	0.55	+0.4
2,036,039	-		MPMX19_01953	0.55	+0.3
2,036,039	-		MPMX19_01953	0.55	+0.2
2,036,039	-		MPMX19_01953	0.55	+0.4
2,036,039	-		MPMX19_01953	0.55	-0.4
2,036,039	-		MPMX19_01953	0.55	-1.1
2,036,039	-		MPMX19_01953	0.55	-0.8
2,036,039	-		MPMX19_01953	0.55	-0.4
2,036,039	-		MPMX19_01953	0.55	+1.0
2,036,039	-		MPMX19_01953	0.55	-1.8
2,036,039	-		MPMX19_01953	0.55	-1.5
2,036,039	-		MPMX19_01953	0.55	+0.0
2,036,039	-		MPMX19_01953	0.55	+0.7
2,036,039	-		MPMX19_01953	0.55	-0.6
2,036,039	-		MPMX19_01953	0.55	+0.7
2,036,039	-		MPMX19_01953	0.55	+0.2
2,036,039	-		MPMX19_01953	0.55	+0.1
2,036,039	-		MPMX19_01953	0.55	+0.2
2,036,039	-		MPMX19_01953	0.55	-0.6
2,036,039	-		MPMX19_01953	0.55	-0.3
2,036,039	-		MPMX19_01953	0.55	+0.1
2,036,039	-		MPMX19_01953	0.55	-1.0
2,036,389	+		MPMX19_01953	0.88	+0.9
2,036,389	+		MPMX19_01953	0.88	-0.2
2,036,390	-		MPMX19_01953	0.88	-1.6
2,036,390	-		MPMX19_01953	0.88	-0.8
2,036,531	+				-1.3
2,036,532	-				-1.6
2,036,553	+				+0.0
2,036,553	+				-0.3
2,036,553	+				-0.1
2,036,553	+				-1.8
2,036,553	+				-1.7
2,036,553	+				+1.1
2,036,553	+				+0.2
2,036,553	+				-1.6
2,036,553	+				+0.9
2,036,553	+				-0.4
2,036,553	+				+0.4
2,036,553	+				-0.1
2,036,553	+				-1.7
2,036,553	+				+1.4
2,036,553	+				-0.5
2,036,553	+				-1.3
2,036,553	+				-1.7
2,036,554	-				-0.1
2,036,554	-				-0.8
2,036,554	-				-0.7
2,036,554	-				-1.7
2,036,554	-				-0.7
2,036,554	-				-1.1
2,036,554	-				-0.8
2,036,554	-				+1.7
2,036,554	-				-0.1
2,036,554	-				-0.7
2,036,554	-				+1.5
2,036,554	-				-0.6
2,036,554	-				+0.0
2,036,554	-				-2.2
2,036,554	-				+1.2
2,036,554	-				+1.0
2,036,554	-				+1.2
2,036,554	-				-1.1
2,036,554	-				-0.8
2,036,554	-				-0.6
2,036,554	-				-0.3
2,036,554	-				-0.3
2,036,554	-				-0.3
2,036,974	+		MPMX19_01954	0.37	-0.8
2,036,974	+		MPMX19_01954	0.37	+0.0
2,036,974	+		MPMX19_01954	0.37	-1.3
2,036,974	+		MPMX19_01954	0.37	-0.3
2,036,974	+		MPMX19_01954	0.37	+0.3
2,036,974	+		MPMX19_01954	0.37	-0.6
2,036,974	+		MPMX19_01954	0.37	+1.3
2,036,974	+		MPMX19_01954	0.37	-1.7
2,036,974	+		MPMX19_01954	0.37	+0.7
2,036,974	+		MPMX19_01954	0.37	-0.3
2,036,974	+		MPMX19_01954	0.37	-1.4
2,036,974	+		MPMX19_01954	0.37	-0.5
2,036,975	-		MPMX19_01954	0.37	-0.8
2,036,975	-		MPMX19_01954	0.37	-0.1
2,036,975	-		MPMX19_01954	0.37	-0.6
2,036,975	-		MPMX19_01954	0.37	-0.8
2,036,975	-		MPMX19_01954	0.37	-0.5
2,036,975	-		MPMX19_01954	0.37	-1.0
2,036,975	-		MPMX19_01954	0.37	-1.8
2,036,975	-		MPMX19_01954	0.37	+1.7
2,036,975	-		MPMX19_01954	0.37	-0.6
2,036,975	-		MPMX19_01954	0.37	+0.5
2,036,975	-		MPMX19_01954	0.37	+0.7
2,036,975	-		MPMX19_01954	0.37	-1.3
2,036,975	-		MPMX19_01954	0.37	-1.4
2,036,975	-		MPMX19_01954	0.37	-0.6
2,037,687	+				-1.8
2,037,687	+				+0.2
2,037,687	+				-0.6
2,037,687	+				-0.6
2,037,687	+				-0.9
2,037,687	+				-1.8
2,037,687	+				+1.2
2,037,688	-				-1.1
2,037,688	-				-1.6
2,037,688	-				-2.1
2,037,688	-				-0.6
2,037,688	-				+1.0
2,037,700	+				+0.6
2,037,700	+				-0.0
2,037,700	+				-0.2
2,037,700	+				+0.1
2,037,700	+				-1.1
2,037,701	-				+1.7
2,037,721	+				-1.3
2,037,721	+				-0.7
2,037,721	+				-0.8
2,037,721	+				-0.7
2,037,721	+				+0.2
2,037,721	+				+0.5
2,037,721	+				-0.7
2,037,721	+				-2.0
2,037,721	+				-1.0
2,037,721	+				+0.5
2,037,721	+				-0.7
2,037,721	+				+0.3
2,037,721	+				+0.1
2,037,721	+				-0.0
2,037,722	-				-0.4
2,037,722	-				-0.6
2,037,722	-				+0.5
2,037,722	-				+0.4
2,037,722	-				-1.3
2,037,722	-				+0.5
2,037,722	-				-1.3
2,037,754	-				+0.6
2,037,754	-				-0.3
2,037,754	-				-0.3
2,037,754	-				-0.0
2,037,754	-				+0.5
2,037,754	-				-0.1
2,037,754	-				+0.2
2,037,754	-				+0.1
2,037,754	-				-0.7
2,037,760	+				-0.1
2,037,761	-				-0.8
2,037,761	-				-0.1
2,037,836	+		MPMX19_01955	0.27	+0.8
2,037,836	+		MPMX19_01955	0.27	-1.4
2,037,837	-		MPMX19_01955	0.27	+0.3
2,037,837	-		MPMX19_01955	0.27	+0.4
2,038,395	+		MPMX19_01956	0.42	+0.1
2,038,395	+		MPMX19_01956	0.42	+1.3
2,038,395	+		MPMX19_01956	0.42	+0.9
2,038,395	+		MPMX19_01956	0.42	-0.8
2,038,395	+		MPMX19_01956	0.42	+0.5
2,038,395	+		MPMX19_01956	0.42	+0.9
2,038,395	+		MPMX19_01956	0.42	-1.3
2,038,396	-		MPMX19_01956	0.42	-1.0
2,038,396	-		MPMX19_01956	0.42	-1.4
2,038,396	-		MPMX19_01956	0.42	-0.3
2,038,396	-		MPMX19_01956	0.42	-0.1
2,038,396	-		MPMX19_01956	0.42	-0.3