Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01848

Experiment: NL-CCM; ambient oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; ambient oxygen
1,926,696	-				-1.5
1,926,696	-				-0.4
1,926,696	-				-3.0
1,926,869	+		MPMX19_01846	0.43	+1.2
1,926,869	+		MPMX19_01846	0.43	-0.9
1,926,869	+		MPMX19_01846	0.43	+0.6
1,926,869	+		MPMX19_01846	0.43	-1.4
1,926,869	+		MPMX19_01846	0.43	-1.0
1,926,870	-		MPMX19_01846	0.43	+0.6
1,926,870	-		MPMX19_01846	0.43	-0.9
1,926,920	+		MPMX19_01846	0.59	-0.6
1,926,920	+		MPMX19_01846	0.59	-0.7
1,926,920	+		MPMX19_01846	0.59	-2.2
1,926,920	+		MPMX19_01846	0.59	-0.6
1,926,920	+		MPMX19_01846	0.59	-1.9
1,926,920	+		MPMX19_01846	0.59	-0.6
1,926,921	-		MPMX19_01846	0.59	-1.4
1,926,921	-		MPMX19_01846	0.59	-0.8
1,926,921	-		MPMX19_01846	0.59	-0.0
1,926,921	-		MPMX19_01846	0.59	-0.6
1,926,941	+		MPMX19_01846	0.65	-0.4
1,926,941	+		MPMX19_01846	0.65	-0.3
1,926,941	+		MPMX19_01846	0.65	+0.1
1,926,941	+		MPMX19_01846	0.65	+0.5
1,926,941	+		MPMX19_01846	0.65	-1.1
1,926,942	-		MPMX19_01846	0.65	+0.2
1,926,942	-		MPMX19_01846	0.65	-1.9
1,926,942	-		MPMX19_01846	0.65	-1.4
1,926,942	-		MPMX19_01846	0.65	-0.3
1,926,942	-		MPMX19_01846	0.65	+0.3
1,926,942	-		MPMX19_01846	0.65	-0.3
1,926,953	+		MPMX19_01846	0.69	-0.0
1,926,953	+		MPMX19_01846	0.69	+1.1
1,926,953	+		MPMX19_01846	0.69	+0.0
1,926,953	+		MPMX19_01846	0.69	-0.6
1,926,957	-		MPMX19_01846	0.70	-1.3
1,926,962	+		MPMX19_01846	0.72	-1.5
1,926,963	-		MPMX19_01846	0.72	-0.1
1,927,099	+				-0.6
1,927,170	+		MPMX19_01847	0.19	-0.1
1,927,170	+		MPMX19_01847	0.19	+1.7
1,927,170	+		MPMX19_01847	0.19	+0.3
1,927,170	+		MPMX19_01847	0.19	-1.3
1,927,172	-		MPMX19_01847	0.19	-0.1
1,927,252	+		MPMX19_01847	0.45	-1.0
1,927,252	+		MPMX19_01847	0.45	-1.4
1,927,252	+		MPMX19_01847	0.45	-1.0
1,927,253	-		MPMX19_01847	0.46	-0.9
1,927,253	-		MPMX19_01847	0.46	+0.5
1,927,320	+		MPMX19_01847	0.68	-0.1
1,927,320	+		MPMX19_01847	0.68	+1.1
1,927,320	+		MPMX19_01847	0.68	-1.2
1,927,320	+		MPMX19_01847	0.68	+0.1
1,927,320	+		MPMX19_01847	0.68	-0.5
1,927,320	+		MPMX19_01847	0.68	-0.1
1,927,320	+		MPMX19_01847	0.68	-1.4
1,927,320	+		MPMX19_01847	0.68	+0.6
1,927,321	-		MPMX19_01847	0.68	+0.1
1,927,321	-		MPMX19_01847	0.68	+0.7
1,927,321	-		MPMX19_01847	0.68	-1.1
1,927,321	-		MPMX19_01847	0.68	-1.6
1,927,321	-		MPMX19_01847	0.68	-0.5
1,927,321	-		MPMX19_01847	0.68	-1.4
1,927,457	+				-1.4
1,927,457	+				-1.3
1,927,457	+				+0.1
1,927,457	+				-0.0
1,927,457	+				+0.5
1,927,457	+				-2.1
1,927,457	+				-0.5
1,927,457	+				-1.2
1,927,457	+				-0.4
1,927,457	+				-0.5
1,927,457	+				+0.1
1,927,457	+				+1.2
1,927,457	+				+0.3
1,927,457	+				-0.9
1,927,457	+				-0.7
1,927,457	+				-0.4
1,927,458	-				-1.0
1,927,458	-				-1.3
1,927,458	-				+0.2
1,927,458	-				-1.5
1,927,458	-				+0.1
1,927,458	-				-0.0
1,927,458	-				+0.1
1,927,458	-				-1.9
1,927,512	+				+0.5
1,927,512	+				-1.7
1,927,512	+				+0.1
1,927,512	+				-0.4
1,927,512	+				-1.1
1,927,513	-				-0.4
1,927,513	-				-1.4
1,927,513	-				+0.1
1,927,513	-				-0.0
1,927,513	-				+0.1
1,927,513	-				-3.4
1,927,735	+		MPMX19_01848	0.25	+0.6
1,927,736	-		MPMX19_01848	0.25	-1.2
1,928,030	+		MPMX19_01848	0.51	-1.2
1,928,030	+		MPMX19_01848	0.51	-2.0
1,928,030	+		MPMX19_01848	0.51	+0.7
1,928,030	+		MPMX19_01848	0.51	-0.4
1,928,030	+		MPMX19_01848	0.51	-1.2
1,928,030	+		MPMX19_01848	0.51	+0.4
1,928,030	+		MPMX19_01848	0.51	-1.0
1,928,030	+		MPMX19_01848	0.51	+1.1
1,928,030	+		MPMX19_01848	0.51	+0.4
1,928,030	+		MPMX19_01848	0.51	-1.3
1,928,030	+		MPMX19_01848	0.51	-0.6
1,928,031	-		MPMX19_01848	0.51	-0.1
1,928,031	-		MPMX19_01848	0.51	-1.1
1,928,031	-		MPMX19_01848	0.51	-2.1
1,928,031	-		MPMX19_01848	0.51	-0.7
1,928,031	-		MPMX19_01848	0.51	-0.1
1,928,031	-		MPMX19_01848	0.51	-0.3
1,928,031	-		MPMX19_01848	0.51	-2.0
1,928,031	-		MPMX19_01848	0.51	+0.7
1,928,031	-		MPMX19_01848	0.51	-0.3
1,928,031	-		MPMX19_01848	0.51	-1.3
1,928,031	-		MPMX19_01848	0.51	-0.3
1,928,031	-		MPMX19_01848	0.51	-2.0
1,928,031	-		MPMX19_01848	0.51	-0.3
1,928,031	-		MPMX19_01848	0.51	-0.2
1,928,031	-		MPMX19_01848	0.51	-0.4
1,928,031	-		MPMX19_01848	0.51	-0.7
1,928,031	-		MPMX19_01848	0.51	+0.1
1,928,031	-		MPMX19_01848	0.51	-1.1
1,928,031	-		MPMX19_01848	0.51	-0.9
1,928,084	+		MPMX19_01848	0.55	-1.0
1,928,084	+		MPMX19_01848	0.55	-2.4
1,928,084	+		MPMX19_01848	0.55	+2.1
1,928,084	+		MPMX19_01848	0.55	-1.2
1,928,084	+		MPMX19_01848	0.55	-2.4
1,928,084	+		MPMX19_01848	0.55	+0.4
1,928,084	+		MPMX19_01848	0.55	-1.5
1,928,084	+		MPMX19_01848	0.55	-0.9
1,928,084	+		MPMX19_01848	0.55	+0.7
1,928,084	+		MPMX19_01848	0.55	+0.2
1,928,084	+		MPMX19_01848	0.55	-0.6
1,928,084	+		MPMX19_01848	0.55	-1.3
1,928,084	+		MPMX19_01848	0.55	-0.1
1,928,084	+		MPMX19_01848	0.55	-0.0
1,928,084	+		MPMX19_01848	0.55	-1.4
1,928,084	+		MPMX19_01848	0.55	+0.7
1,928,084	+		MPMX19_01848	0.55	+0.7
1,928,084	+		MPMX19_01848	0.55	+1.4
1,928,084	+		MPMX19_01848	0.55	-0.1
1,928,084	+		MPMX19_01848	0.55	+0.1
1,928,084	+		MPMX19_01848	0.55	-1.0
1,928,084	+		MPMX19_01848	0.55	-0.1
1,928,084	+		MPMX19_01848	0.55	-1.1
1,928,084	+		MPMX19_01848	0.55	-1.2
1,928,084	+		MPMX19_01848	0.55	-1.4
1,928,084	+		MPMX19_01848	0.55	-0.1
1,928,084	+		MPMX19_01848	0.55	-1.1
1,928,085	-		MPMX19_01848	0.55	-2.2
1,928,085	-		MPMX19_01848	0.55	+0.1
1,928,085	-		MPMX19_01848	0.55	+0.1
1,928,085	-		MPMX19_01848	0.55	-1.7
1,928,085	-		MPMX19_01848	0.55	-0.6
1,928,085	-		MPMX19_01848	0.55	-1.4
1,928,085	-		MPMX19_01848	0.55	-0.4
1,928,085	-		MPMX19_01848	0.55	-1.1
1,928,085	-		MPMX19_01848	0.55	+0.7
1,928,085	-		MPMX19_01848	0.55	-0.6
1,928,085	-		MPMX19_01848	0.55	-1.8
1,928,085	-		MPMX19_01848	0.55	-0.6
1,928,085	-		MPMX19_01848	0.55	+0.7
1,928,085	-		MPMX19_01848	0.55	+0.1
1,928,085	-		MPMX19_01848	0.55	-0.3
1,928,085	-		MPMX19_01848	0.55	-1.3
1,928,085	-		MPMX19_01848	0.55	-0.8
1,928,085	-		MPMX19_01848	0.55	-1.1
1,928,085	-		MPMX19_01848	0.55	-0.1
1,928,085	-		MPMX19_01848	0.55	-0.9
1,928,085	-		MPMX19_01848	0.55	+0.4
1,928,085	-		MPMX19_01848	0.55	-1.9
1,928,085	-		MPMX19_01848	0.55	-0.3
1,928,085	-		MPMX19_01848	0.55	+1.0
1,928,085	-		MPMX19_01848	0.55	+0.7
1,928,085	-		MPMX19_01848	0.55	+0.6
1,928,085	-		MPMX19_01848	0.55	-1.3
1,928,085	-		MPMX19_01848	0.55	+0.1
1,928,085	-		MPMX19_01848	0.55	-0.9
1,928,085	-		MPMX19_01848	0.55	+0.7
1,928,085	-		MPMX19_01848	0.55	-1.7
1,928,085	-		MPMX19_01848	0.55	-0.7
1,928,085	-		MPMX19_01848	0.55	-2.4
1,928,085	-		MPMX19_01848	0.55	+0.5
1,928,525	+				-0.4
1,928,525	+				-1.4
1,928,526	-				+0.2
1,928,526	-				+1.5
1,928,673	+		MPMX19_01849	0.16	+0.6
1,928,673	+		MPMX19_01849	0.16	-1.3
1,928,673	+		MPMX19_01849	0.16	-0.0
1,928,674	-		MPMX19_01849	0.16	-1.3
1,928,674	-		MPMX19_01849	0.16	-0.4
1,928,674	-		MPMX19_01849	0.16	-0.6
1,928,682	+		MPMX19_01849	0.20	-0.1
1,928,682	+		MPMX19_01849	0.20	-0.5
1,928,682	+		MPMX19_01849	0.20	+0.2
1,928,682	+		MPMX19_01849	0.20	-0.5
1,928,682	+		MPMX19_01849	0.20	-1.1
1,928,682	+		MPMX19_01849	0.20	+0.2
1,928,682	+		MPMX19_01849	0.20	-0.3
1,928,682	+		MPMX19_01849	0.20	-1.2
1,928,682	+		MPMX19_01849	0.20	+0.2
1,928,682	+		MPMX19_01849	0.20	+0.4
1,928,682	+		MPMX19_01849	0.20	-0.6
1,928,682	+		MPMX19_01849	0.20	+0.4
1,928,682	+		MPMX19_01849	0.20	-1.1
1,928,682	+		MPMX19_01849	0.20	-0.6
1,928,682	+		MPMX19_01849	0.20	+0.2
1,928,682	+		MPMX19_01849	0.20	-0.1
1,928,682	+		MPMX19_01849	0.20	+0.0
1,928,682	+		MPMX19_01849	0.20	+0.4
1,928,682	+		MPMX19_01849	0.20	-0.1
1,928,682	+		MPMX19_01849	0.20	-0.8
1,928,682	+		MPMX19_01849	0.20	-0.3
1,928,682	+		MPMX19_01849	0.20	-0.6
1,928,683	-		MPMX19_01849	0.20	-1.0
1,928,683	-		MPMX19_01849	0.20	-0.8
1,928,683	-		MPMX19_01849	0.20	+1.1
1,928,683	-		MPMX19_01849	0.20	+0.2
1,928,683	-		MPMX19_01849	0.20	+0.5
1,928,683	-		MPMX19_01849	0.20	-1.3
1,928,683	-		MPMX19_01849	0.20	+0.4
1,928,683	-		MPMX19_01849	0.20	-0.4
1,928,683	-		MPMX19_01849	0.20	-0.2
1,928,683	-		MPMX19_01849	0.20	+0.1
1,928,683	-		MPMX19_01849	0.20	-1.4
1,928,683	-		MPMX19_01849	0.20	-1.2
1,928,683	-		MPMX19_01849	0.20	-1.0
1,928,683	-		MPMX19_01849	0.20	-0.4
1,928,683	-		MPMX19_01849	0.20	-0.8
1,928,683	-		MPMX19_01849	0.20	-1.1
1,928,821	+		MPMX19_01849	0.86	-2.0
1,928,821	+		MPMX19_01849	0.86	-0.1
1,928,821	+		MPMX19_01849	0.86	-0.3
1,928,821	+		MPMX19_01849	0.86	-0.3
1,928,821	+		MPMX19_01849	0.86	+0.7
1,928,821	+		MPMX19_01849	0.86	+1.6
1,928,821	+		MPMX19_01849	0.86	-0.6
1,928,821	+		MPMX19_01849	0.86	+0.5
1,928,821	+		MPMX19_01849	0.86	-0.6
1,928,821	+		MPMX19_01849	0.86	-1.4
1,928,821	+		MPMX19_01849	0.86	-1.4
1,928,821	+		MPMX19_01849	0.86	-0.8
1,928,821	+		MPMX19_01849	0.86	+1.4
1,928,821	+		MPMX19_01849	0.86	-2.3
1,928,821	+		MPMX19_01849	0.86	+0.5
1,928,821	+		MPMX19_01849	0.86	-0.1
1,928,822	-		MPMX19_01849	0.87	-0.2
1,928,822	-		MPMX19_01849	0.87	-1.3
1,928,822	-		MPMX19_01849	0.87	+0.3
1,928,822	-		MPMX19_01849	0.87	-1.8
1,928,822	-		MPMX19_01849	0.87	-0.1
1,928,822	-		MPMX19_01849	0.87	-0.3
1,928,822	-		MPMX19_01849	0.87	-1.6
1,928,822	-		MPMX19_01849	0.87	-0.8
1,928,822	-		MPMX19_01849	0.87	+0.2
1,928,822	-		MPMX19_01849	0.87	-0.5
1,928,822	-		MPMX19_01849	0.87	-0.4
1,928,822	-		MPMX19_01849	0.87	+0.5
1,928,822	-		MPMX19_01849	0.87	+0.4
1,928,822	-		MPMX19_01849	0.87	-0.3
1,928,822	-		MPMX19_01849	0.87	-0.4
1,928,822	-		MPMX19_01849	0.87	-0.3
1,928,822	-		MPMX19_01849	0.87	-0.2
1,928,822	-		MPMX19_01849	0.87	-0.8
1,928,822	-		MPMX19_01849	0.87	-0.6
1,928,822	-		MPMX19_01849	0.87	-1.1
1,928,847	+				-0.4
1,928,847	+				-0.4
1,928,848	-				-0.3
1,929,200	+				-0.3
1,929,200	+				-0.1
1,929,200	+				+0.0
1,929,200	+				+1.3
1,929,200	+				-1.4
1,929,200	+				-0.8
1,929,200	+				-0.9
1,929,200	+				-0.1
1,929,200	+				+0.2
1,929,200	+				-0.7
1,929,200	+				+0.2
1,929,200	+				-0.5
1,929,200	+				+0.7
1,929,200	+				-0.5
1,929,200	+				+0.5
1,929,200	+				-0.6
1,929,200	+				-1.3
1,929,200	+				-2.0
1,929,200	+				+0.1
1,929,200	+				-1.1
1,929,200	+				+0.1
1,929,200	+				-1.8
1,929,200	+				+0.2
1,929,200	+				-0.8
1,929,200	+				-0.3
1,929,200	+				-0.6
1,929,200	+				+0.5
1,929,200	+				-1.4
1,929,200	+				-0.3
1,929,200	+				-1.7
1,929,200	+				-0.8
1,929,200	+				-0.5
1,929,200	+				-1.3
1,929,200	+				-0.3
1,929,200	+				-0.7
1,929,200	+				-1.0
1,929,200	+				+1.3
1,929,201	-				-0.4
1,929,201	-				-1.3
1,929,201	-				-1.0
1,929,201	-				+1.4
1,929,201	-				-1.0
1,929,201	-				-1.7
1,929,201	-				-0.1
1,929,201	-				-0.3
1,929,201	-				-0.8
1,929,201	-				+0.7
1,929,201	-				-1.0
1,929,201	-				-1.7
1,929,201	-				+0.6
1,929,201	-				-1.3
1,929,201	-				+0.5
1,929,201	-				-0.4
1,929,201	-				-0.7
1,929,201	-				-0.3
1,929,201	-				-2.0
1,929,201	-				-0.8
1,929,201	-				+1.0
1,929,201	-				+1.3
1,929,201	-				-0.6
1,929,201	-				-0.1
1,929,201	-				+1.3
1,929,201	-				-1.3
1,929,201	-				+1.9
1,929,201	-				-1.1
1,929,201	-				-0.7
1,929,201	-				-1.0
1,929,201	-				-0.8
1,929,201	-				-0.8
1,929,201	-				+0.2
1,929,201	-				-0.3
1,929,202	+				-1.3
1,929,202	+				-0.9
1,929,202	+				+1.3
1,929,202	+				-0.7
1,929,202	+				-0.3
1,929,202	+				+0.2
1,929,202	+				+0.6
1,929,202	+				-0.3
1,929,202	+				-1.0
1,929,202	+				+0.6
1,929,203	-				-0.3
1,929,203	-				-0.4
1,929,203	-				+0.1
1,929,203	-				-0.6
1,929,203	-				-0.7
1,929,323	+		MPMX19_01851	0.15	-1.1
1,929,323	+		MPMX19_01851	0.15	+0.2
1,929,323	+		MPMX19_01851	0.15	-1.4
1,929,323	+		MPMX19_01851	0.15	+0.2
1,929,323	+		MPMX19_01851	0.15	-1.7
1,929,323	+		MPMX19_01851	0.15	-0.4
1,929,323	+		MPMX19_01851	0.15	-0.3
1,929,323	+		MPMX19_01851	0.15	+0.2
1,929,323	+		MPMX19_01851	0.15	-0.1
1,929,323	+		MPMX19_01851	0.15	-0.3
1,929,323	+		MPMX19_01851	0.15	+1.5
1,929,323	+		MPMX19_01851	0.15	-0.6
1,929,323	+		MPMX19_01851	0.15	-0.6
1,929,323	+		MPMX19_01851	0.15	+0.2
1,929,323	+		MPMX19_01851	0.15	-1.4
1,929,324	-		MPMX19_01851	0.15	-0.7
1,929,324	-		MPMX19_01851	0.15	-2.3
1,929,324	-		MPMX19_01851	0.15	+0.2
1,929,324	-		MPMX19_01851	0.15	-0.8
1,929,324	-		MPMX19_01851	0.15	-1.0
1,929,324	-		MPMX19_01851	0.15	-1.3
1,929,324	-		MPMX19_01851	0.15	-0.2
1,929,324	-		MPMX19_01851	0.15	+1.5
1,929,324	-		MPMX19_01851	0.15	-0.2
1,929,500	+		MPMX19_01851	0.30	-0.7
1,929,500	+		MPMX19_01851	0.30	-1.2
1,929,500	+		MPMX19_01851	0.30	-0.5
1,929,501	-		MPMX19_01851	0.30	+1.7
1,929,501	-		MPMX19_01851	0.30	-0.8
1,929,501	-		MPMX19_01851	0.30	-1.3
1,929,501	-		MPMX19_01851	0.30	+1.2
1,929,543	+		MPMX19_01851	0.33	-0.6