Strain Fitness in Azospirillum sp. SherDot2

Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01613

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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Per-strain Table

Position	Strand	LocusTag	Fraction	NL-CCM; ambient oxygen
				remove
1,691,760	+			+0.3
1,691,760	+			+0.2
1,691,761	-			-1.7
1,691,761	-			-0.7
1,691,929	+			+0.3
1,691,929	+			-0.3
1,691,929	+			-1.4
1,691,929	+			-2.3
1,691,929	+			+0.3
1,691,929	+			-0.9
1,691,929	+			-0.3
1,691,929	+			-0.4
1,691,929	+			-0.6
1,691,929	+			+0.1
1,691,929	+			+0.3
1,691,929	+			-0.7
1,691,930	-			-0.2
1,691,930	-			-0.7
1,691,930	-			-0.2
1,691,930	-			+1.0
1,691,930	-			-0.6
1,691,930	-			-0.9
1,691,930	-			-0.3
1,691,930	-			+0.2
1,691,930	-			-1.9
1,691,930	-			-1.0
1,691,930	-			+1.3
1,691,930	-			-0.5
1,691,930	-			-0.6
1,691,943	+			-0.1
1,691,943	+			+1.5
1,691,943	+			-1.6
1,691,944	-			-0.4
1,691,944	-			+0.1
1,691,944	-			-2.1
1,691,960	+			-0.6
1,691,960	+			-0.6
1,691,960	+			+0.5
1,691,960	+			-1.4
1,691,960	+			-0.5
1,691,960	+			+0.9
1,691,961	-			-0.9
1,691,961	-			+0.1
1,691,961	-			-1.8
1,691,961	-			-0.6
1,691,961	-			-0.6
1,691,961	-			-0.2
1,691,961	-			-1.3
1,691,983	+			+0.5
1,691,983	+			-2.0
1,691,983	+			+0.1
1,691,983	+			+0.0
1,691,983	+			+0.7
1,691,983	+			+1.2
1,691,983	+			-0.9
1,691,983	+			+2.0
1,691,983	+			+0.0
1,691,983	+			-0.7
1,691,983	+			+0.5
1,691,983	+			-0.5
1,691,983	+			-0.8
1,691,983	+			-0.5
1,691,983	+			+0.1
1,691,983	+			-0.1
1,691,983	+			-0.4
1,691,983	+			-1.3
1,691,983	+			-0.6
1,691,983	+			+0.2
1,691,983	+			+0.0
1,691,983	+			-1.7
1,691,983	+			-0.9
1,691,983	+			+0.7
1,691,983	+			-0.4
1,691,983	+			+1.1
1,691,983	+			-1.1
1,691,983	+			-2.2
1,691,983	+			-0.9
1,691,983	+			-2.0
1,691,983	+			-1.1
1,691,983	+			-1.4
1,691,983	+			-0.5
1,691,984	-			-1.4
1,691,984	-			-0.5
1,691,984	-			-1.4
1,691,984	-			+0.9
1,691,984	-			+0.5
1,691,984	-			+0.5
1,691,984	-			+0.6
1,691,984	-			-1.6
1,691,984	-			-0.4
1,691,984	-			-0.9
1,691,984	-			+0.1
1,691,984	-			+0.1
1,691,984	-			-0.8
1,691,984	-			+0.7
1,691,984	-			-1.1
1,691,984	-			-1.9
1,691,984	-			+0.3
1,691,984	-			-0.0
1,691,984	-			+0.7
1,691,984	-			+0.6
1,691,984	-			+0.7
1,691,984	-			-1.7
1,691,984	-			+0.9
1,691,984	-			-0.9
1,691,984	-			-0.2
1,691,984	-			-0.1
1,691,984	-			-0.1
1,691,984	-			-0.1
1,691,984	-			+0.0
1,691,984	-			-1.2
1,691,984	-			-1.4
1,691,984	-			-0.5
1,691,984	-			-0.3
1,691,984	-			-1.0
1,691,984	-			-0.8
1,691,984	-			-1.5
1,691,984	-			+0.3
1,691,984	-			-1.8
1,691,984	-			+0.7
1,691,984	-			-1.7
1,691,984	-			-0.1
1,691,984	-			-0.9
1,692,153	+	MPMX19_01612	0.15	+0.7
1,692,153	+	MPMX19_01612	0.15	-1.4
1,692,153	+	MPMX19_01612	0.15	-0.3
1,692,153	+	MPMX19_01612	0.15	-0.9
1,692,153	+	MPMX19_01612	0.15	-0.6
1,692,153	+	MPMX19_01612	0.15	-0.4
1,692,153	+	MPMX19_01612	0.15	-0.6
1,692,153	+	MPMX19_01612	0.15	+1.2
1,692,153	+	MPMX19_01612	0.15	-0.3
1,692,153	+	MPMX19_01612	0.15	-0.2
1,692,153	+	MPMX19_01612	0.15	-0.6
1,692,153	+	MPMX19_01612	0.15	+0.8
1,692,154	-	MPMX19_01612	0.15	+0.1
1,692,154	-	MPMX19_01612	0.15	+0.7
1,692,154	-	MPMX19_01612	0.15	-1.9
1,692,154	-	MPMX19_01612	0.15	-2.2
1,692,154	-	MPMX19_01612	0.15	-1.2
1,692,154	-	MPMX19_01612	0.15	-0.2
1,692,154	-	MPMX19_01612	0.15	-0.7
1,692,154	-	MPMX19_01612	0.15	+0.5
1,692,154	-	MPMX19_01612	0.15	+0.6
1,692,154	-	MPMX19_01612	0.15	-2.2
1,692,154	-	MPMX19_01612	0.15	+0.1
1,692,351	+	MPMX19_01612	0.45	-0.6
1,692,351	+	MPMX19_01612	0.45	-0.1
1,692,351	+	MPMX19_01612	0.45	+0.7
1,692,351	+	MPMX19_01612	0.45	-0.6
1,692,351	+	MPMX19_01612	0.45	-0.5
1,692,351	+	MPMX19_01612	0.45	+1.0
1,692,352	-	MPMX19_01612	0.45	+0.6
1,692,352	-	MPMX19_01612	0.45	-0.1
1,692,352	-	MPMX19_01612	0.45	+0.4
1,692,352	-	MPMX19_01612	0.45	-2.4
1,692,352	-	MPMX19_01612	0.45	-1.5
1,692,353	+	MPMX19_01612	0.45	+0.4
1,692,354	-	MPMX19_01612	0.45	+0.7
1,692,354	-	MPMX19_01612	0.45	+0.1
1,692,354	-	MPMX19_01612	0.45	-0.7
1,692,354	-	MPMX19_01612	0.45	+0.4
1,692,354	-	MPMX19_01612	0.45	-0.4
1,692,354	-	MPMX19_01612	0.45	+0.1
1,692,420	+	MPMX19_01612	0.55	-0.6
1,692,420	+	MPMX19_01612	0.55	-1.6
1,692,420	+	MPMX19_01612	0.55	-0.7
1,692,420	+	MPMX19_01612	0.55	-1.9
1,692,420	+	MPMX19_01612	0.55	-1.1
1,692,420	+	MPMX19_01612	0.55	+0.2
1,692,420	+	MPMX19_01612	0.55	-0.2
1,692,420	+	MPMX19_01612	0.55	-0.3
1,692,420	+	MPMX19_01612	0.55	-0.7
1,692,420	+	MPMX19_01612	0.55	-0.0
1,692,421	-	MPMX19_01612	0.55	+0.3
1,692,421	-	MPMX19_01612	0.55	-1.5
1,692,421	-	MPMX19_01612	0.55	-1.1
1,692,421	-	MPMX19_01612	0.55	-2.1
1,692,720	+			-0.3
1,692,720	+			+0.4
1,692,720	+			-1.4
1,692,720	+			-0.1
1,692,721	-			+1.1
1,692,721	-			+0.2
1,692,721	-			+0.6
1,692,733	+			-0.1
1,692,751	-			-1.3
1,692,751	-			-1.1
1,692,881	+	MPMX19_01613	0.21	+1.5
1,692,881	+	MPMX19_01613	0.21	-0.6
1,692,881	+	MPMX19_01613	0.21	-1.3
1,692,881	+	MPMX19_01613	0.21	-1.2
1,692,881	+	MPMX19_01613	0.21	-1.0
1,692,881	+	MPMX19_01613	0.21	-1.3
1,692,881	+	MPMX19_01613	0.21	-1.3
1,692,881	+	MPMX19_01613	0.21	+0.5
1,692,881	+	MPMX19_01613	0.21	-0.5
1,692,882	-	MPMX19_01613	0.21	-0.7
1,692,882	-	MPMX19_01613	0.21	-1.0
1,692,882	-	MPMX19_01613	0.21	-0.5
1,692,882	-	MPMX19_01613	0.21	-1.3
1,692,882	-	MPMX19_01613	0.21	-0.3
1,693,497	-			-1.3
1,693,497	-			-1.5
1,693,528	+			+0.1
1,693,528	+			-0.5
1,693,529	-			+0.1
1,693,529	-			+0.4
1,693,529	-			-0.2
1,693,529	-			-0.2
1,693,529	-			-0.4
1,694,070	+	MPMX19_01614	0.63	-1.5
1,694,070	+	MPMX19_01614	0.63	-1.0
1,694,070	+	MPMX19_01614	0.63	-0.3
1,694,070	+	MPMX19_01614	0.63	-0.0
1,694,071	-	MPMX19_01614	0.63	-2.7
1,694,071	-	MPMX19_01614	0.63	-0.0
1,694,071	-	MPMX19_01614	0.63	+0.0
1,694,071	-	MPMX19_01614	0.63	-0.4
1,694,071	-	MPMX19_01614	0.63	-0.3
1,694,379	+			-0.4
1,694,379	+			+0.1

Or see this region's nucleotide sequence