Strain Fitness in Methylophilus sp. DMC18 around GFF906

Experiment: Methanol (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Methanol (C)
142,600	-		GFF905	0.12	-0.7
142,600	-		GFF905	0.12	-0.1
142,665	+		GFF905	0.18	-0.3
142,665	+		GFF905	0.18	-2.2
142,666	-		GFF905	0.18	-0.1
142,700	+		GFF905	0.21	-1.2
142,701	-		GFF905	0.22	-0.5
142,701	-		GFF905	0.22	-0.3
142,715	+		GFF905	0.23	-0.6
142,715	+		GFF905	0.23	+1.1
142,715	+		GFF905	0.23	+0.3
142,716	-		GFF905	0.23	-0.6
142,716	-		GFF905	0.23	+0.1
142,716	-		GFF905	0.23	+1.1
142,716	-		GFF905	0.23	+0.0
142,716	-		GFF905	0.23	+0.2
142,716	-		GFF905	0.23	-0.7
142,716	-		GFF905	0.23	-1.5
142,797	+		GFF905	0.30	-2.1
142,797	+		GFF905	0.30	-0.1
142,827	+		GFF905	0.33	+0.4
142,827	+		GFF905	0.33	-2.1
142,827	+		GFF905	0.33	-1.7
142,828	-		GFF905	0.33	-0.4
142,924	+		GFF905	0.42	-0.7
142,999	+		GFF905	0.49	-0.1
143,000	-		GFF905	0.49	+0.0
143,003	+		GFF905	0.49	-0.9
143,003	+		GFF905	0.49	-0.9
143,003	+		GFF905	0.49	+1.1
143,003	+		GFF905	0.49	-1.2
143,003	+		GFF905	0.49	-0.9
143,003	+		GFF905	0.49	-1.0
143,004	-		GFF905	0.49	-0.3
143,004	-		GFF905	0.49	-0.1
143,004	-		GFF905	0.49	-0.1
143,004	-		GFF905	0.49	-0.2
143,004	-		GFF905	0.49	+0.5
143,012	+		GFF905	0.50	-0.6
143,016	+		GFF905	0.50	-0.5
143,052	+		GFF905	0.54	-0.7
143,052	+		GFF905	0.54	-2.1
143,052	+		GFF905	0.54	+0.8
143,052	+		GFF905	0.54	-0.5
143,052	+		GFF905	0.54	-0.7
143,052	+		GFF905	0.54	-0.2
143,053	-		GFF905	0.54	-0.6
143,053	-		GFF905	0.54	-0.6
143,053	-		GFF905	0.54	-0.6
143,054	+		GFF905	0.54	-0.9
143,054	+		GFF905	0.54	-0.4
143,054	+		GFF905	0.54	+0.1
143,055	-		GFF905	0.54	-0.6
143,055	-		GFF905	0.54	-2.5
143,055	-		GFF905	0.54	-1.2
143,155	+		GFF905	0.63	+0.3
143,157	-		GFF905	0.63	-0.7
143,198	+		GFF905	0.67	+0.4
143,198	+		GFF905	0.67	-0.8
143,198	+		GFF905	0.67	+1.0
143,198	+		GFF905	0.67	-2.6
143,199	-		GFF905	0.67	-0.9
143,199	-		GFF905	0.67	-1.7
143,199	-		GFF905	0.67	-0.4
143,199	-		GFF905	0.67	-1.9
143,199	-		GFF905	0.67	-0.3
143,273	-		GFF905	0.74	-1.2
143,341	-		GFF905	0.80	-1.2
143,411	-		GFF905	0.86	-1.8
143,411	-		GFF905	0.86	-0.1
143,411	-		GFF905	0.86	+0.3
143,454	+				-1.2
143,455	-				+0.6
143,455	-				-0.9
143,455	-				-1.2
143,455	-				+0.1
143,455	-				-0.1
143,503	-				-0.9
143,539	+				-1.1
143,540	-				-0.9
143,544	+				-1.2
143,544	+				-0.7
143,544	+				-0.9
143,545	-				-1.2
143,545	-				-1.1
143,545	-				-0.6
143,559	+				-0.1
143,560	-				-0.2
143,564	-				-0.2
143,564	-				-1.2
143,564	-				+0.1
143,592	+				-0.9
143,592	+				+0.1
143,599	+				-0.9
143,600	-				+0.1
143,650	+				-0.7
143,650	+				-1.2
143,651	-				-1.2
143,651	-				+0.1
143,651	-				+0.1
143,652	+				-0.2
143,652	+				-1.4
143,652	+				+0.1
143,652	+				-1.2
143,652	+				-0.7
143,652	+				-1.7
143,652	+				-2.8
143,653	-				-2.8
143,653	-				-0.2
143,653	-				-1.2
143,653	-				-0.9
143,653	-				-1.5
143,653	-				-0.2
143,764	-		GFF906	0.14	-0.9
143,824	+		GFF906	0.19	-2.2
143,825	-		GFF906	0.20	-1.1
143,825	-		GFF906	0.20	+0.3
143,825	-		GFF906	0.20	-1.7
143,825	-		GFF906	0.20	-0.7
143,825	-		GFF906	0.20	+0.1
143,876	+		GFF906	0.24	+0.4
143,906	+		GFF906	0.27	+0.1
143,907	-		GFF906	0.27	-0.9
143,955	-		GFF906	0.31	-0.5
143,964	+		GFF906	0.32	+0.3
143,964	+		GFF906	0.32	-0.1
143,965	-		GFF906	0.32	-0.3
143,965	-		GFF906	0.32	-0.7
143,965	-		GFF906	0.32	-0.1
143,965	-		GFF906	0.32	-1.3
143,965	-		GFF906	0.32	-1.2
143,965	-		GFF906	0.32	-0.9
143,965	-		GFF906	0.32	-0.5
143,966	+		GFF906	0.32	+0.2
143,966	+		GFF906	0.32	-0.4
143,966	+		GFF906	0.32	-0.2
143,966	+		GFF906	0.32	-1.5
143,966	+		GFF906	0.32	-0.1
143,966	+		GFF906	0.32	-0.2
143,966	+		GFF906	0.32	-1.2
143,966	+		GFF906	0.32	+0.7
143,966	+		GFF906	0.32	-1.2
143,967	-		GFF906	0.32	+0.1
143,967	-		GFF906	0.32	+0.1
143,967	-		GFF906	0.32	-0.9
143,967	-		GFF906	0.32	+0.4
143,967	-		GFF906	0.32	-0.9
143,967	-		GFF906	0.32	-0.5
143,970	+		GFF906	0.32	-1.2
143,971	-		GFF906	0.32	+0.3
144,064	-		GFF906	0.40	-0.1
144,090	+		GFF906	0.42	-1.7
144,220	+		GFF906	0.54	-0.7
144,253	+		GFF906	0.56	-1.2
144,253	+		GFF906	0.56	-0.1
144,254	-		GFF906	0.57	-0.2
144,273	-		GFF906	0.58	-1.2
144,286	+		GFF906	0.59	-0.9
144,286	+		GFF906	0.59	-0.9
144,286	+		GFF906	0.59	+0.1
144,287	-		GFF906	0.59	-0.5
144,309	+		GFF906	0.61	-0.7
144,309	+		GFF906	0.61	+1.4
144,309	+		GFF906	0.61	+0.1
144,310	-		GFF906	0.61	+1.1
144,398	+		GFF906	0.69	-1.2
144,399	-		GFF906	0.69	+0.3
144,399	-		GFF906	0.69	-0.5
144,409	-		GFF906	0.70	-0.8
144,445	+		GFF906	0.73	-0.1
144,532	-		GFF906	0.80	+0.7
144,532	-		GFF906	0.80	-0.9
144,614	+		GFF906	0.88	-0.3
144,615	-		GFF906	0.88	-0.5
144,615	-		GFF906	0.88	-1.4
144,639	-		GFF906	0.90	-0.4
144,639	-		GFF906	0.90	-0.1
144,667	+				-0.2
144,740	+				+0.1
144,768	+				-1.3
144,768	+				-0.9
144,769	-				-0.7
144,775	+				-0.5
144,776	-				-2.1
144,776	-				-0.5
144,776	-				-1.9
144,802	-				+0.3
144,802	-				-0.9
144,802	-				-0.1
144,805	+				+0.3
144,805	+				-0.2
144,831	+				+0.9
144,831	+				-1.2
144,831	+				-0.1
144,831	+				-0.0
144,831	+				-0.4
144,832	-				+0.1
144,832	-				-1.2
144,832	-				-0.5
144,832	-				-0.7
144,832	-				-1.9
144,832	-				-1.2
144,836	+				+0.1
144,837	-				-1.7
144,853	+				+0.1
144,854	-				-1.3
144,854	-				-2.2
144,854	-				-0.3
144,854	-				-0.7
144,855	+				+0.2
144,855	+				-0.5
144,855	+				-0.4
144,855	+				-2.2
144,855	+				+0.1
144,855	+				-1.5
144,855	+				-0.6
144,855	+				-0.9
144,856	-				-1.7
144,856	-				-0.7
144,858	+				+0.1
144,858	+				-1.1
144,878	+				-1.2
144,878	+				-0.9
144,878	+				-0.2
144,879	-				-0.9