Strain Fitness in Methylophilus sp. DMC18 around GFF2297

Experiment: Methanol (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Methanol (C)
15,785	+				+0.8
15,785	+				-0.8
15,785	+				-0.7
15,785	+				-2.3
15,785	+				-0.9
15,786	-				+0.7
15,786	-				-1.8
15,786	-				+1.1
15,786	-				-1.3
15,818	+				-0.9
15,819	-				-0.5
15,895	+		GFF2296	0.15	-1.8
15,895	+		GFF2296	0.15	-0.5
15,895	+		GFF2296	0.15	-1.5
15,895	+		GFF2296	0.15	-0.3
15,896	-		GFF2296	0.16	+0.6
15,990	+		GFF2296	0.29	-1.3
15,991	-		GFF2296	0.29	-0.9
16,000	+		GFF2296	0.30	-0.9
16,000	+		GFF2296	0.30	-1.8
16,000	+		GFF2296	0.30	-1.2
16,001	-		GFF2296	0.30	-0.9
16,001	-		GFF2296	0.30	-1.5
16,147	-		GFF2296	0.51	+0.3
16,205	+		GFF2296	0.60	-1.8
16,206	-		GFF2296	0.60	-1.8
16,216	+		GFF2296	0.61	+0.2
16,217	-		GFF2296	0.61	-0.9
16,217	-		GFF2296	0.61	-1.3
16,347	+		GFF2296	0.80	-1.2
16,347	+		GFF2296	0.80	-0.3
16,348	-		GFF2296	0.80	+0.1
16,348	-		GFF2296	0.80	-0.9
16,348	-		GFF2296	0.80	-2.4
16,389	-		GFF2296	0.86	-1.5
16,412	-		GFF2296	0.89	-0.2
16,509	+				-1.3
16,509	+				+0.1
16,510	-				-0.9
16,510	-				-0.6
16,994	+		GFF2297	0.44	-1.4
17,003	+		GFF2297	0.45	-0.5
17,003	+		GFF2297	0.45	-1.1
17,003	+		GFF2297	0.45	-0.3
17,004	-		GFF2297	0.45	+0.6
17,048	+		GFF2297	0.49	-0.5
17,048	+		GFF2297	0.49	-0.5
17,048	+		GFF2297	0.49	-1.5
17,049	-		GFF2297	0.49	-1.8
17,072	+		GFF2297	0.51	-0.5
17,072	+		GFF2297	0.51	-0.9
17,072	+		GFF2297	0.51	-1.6
17,072	+		GFF2297	0.51	+0.1
17,072	+		GFF2297	0.51	-0.1
17,073	-		GFF2297	0.51	-0.5
17,073	-		GFF2297	0.51	-0.6
17,079	+		GFF2297	0.52	+0.4
17,079	+		GFF2297	0.52	-1.5
17,079	+		GFF2297	0.52	+0.5
17,080	-		GFF2297	0.52	-0.9
17,109	+		GFF2297	0.54	-0.7
17,121	-		GFF2297	0.55	-1.5
17,176	+		GFF2297	0.60	+0.7
17,176	+		GFF2297	0.60	-1.8
17,176	+		GFF2297	0.60	+0.3
17,177	-		GFF2297	0.61	-0.3
17,180	+		GFF2297	0.61	-1.5
17,180	+		GFF2297	0.61	-2.1
17,180	+		GFF2297	0.61	-0.4
17,180	+		GFF2297	0.61	-2.6
17,181	-		GFF2297	0.61	-1.8
17,181	-		GFF2297	0.61	-1.9
17,181	-		GFF2297	0.61	-0.5
17,181	-		GFF2297	0.61	-2.5
17,181	-		GFF2297	0.61	-1.5
17,219	+		GFF2297	0.64	+0.4
17,219	+		GFF2297	0.64	-0.4
17,219	+		GFF2297	0.64	-0.9
17,220	-		GFF2297	0.64	+0.6
17,234	-		GFF2297	0.66	+0.1
17,323	+		GFF2297	0.74	-0.8
17,323	+		GFF2297	0.74	-2.4
17,323	+		GFF2297	0.74	+0.1
17,323	+		GFF2297	0.74	-1.0
17,324	-		GFF2297	0.74	-0.1
17,324	-		GFF2297	0.74	+0.6
17,324	-		GFF2297	0.74	-0.9
17,324	-		GFF2297	0.74	-0.4
17,327	+		GFF2297	0.74	-1.9
17,327	+		GFF2297	0.74	+0.6
17,335	+		GFF2297	0.75	-0.1
17,335	+		GFF2297	0.75	-1.3
17,336	-		GFF2297	0.75	-0.9
17,336	-		GFF2297	0.75	-1.3
17,399	+		GFF2297	0.81	-1.8
17,399	+		GFF2297	0.81	-0.9
17,399	+		GFF2297	0.81	-1.0
17,399	+		GFF2297	0.81	-1.4
17,400	-		GFF2297	0.81	-0.3
17,400	-		GFF2297	0.81	+0.2
17,405	+		GFF2297	0.81	-0.9
17,405	+		GFF2297	0.81	-0.5
17,405	+		GFF2297	0.81	-0.5
17,405	+		GFF2297	0.81	-0.3
17,405	+		GFF2297	0.81	-0.5
17,405	+		GFF2297	0.81	-0.8
17,406	-		GFF2297	0.81	-0.5
17,406	-		GFF2297	0.81	-1.9
17,455	+		GFF2297	0.86	-0.9
17,464	+		GFF2297	0.87	-0.8
17,465	-		GFF2297	0.87	-0.5
17,505	+				-0.9
17,505	+				-0.8
17,506	-				-0.1
17,528	+				-0.5
17,528	+				-1.4
17,528	+				-0.4
17,529	-				-1.1
17,529	-				-1.3
17,615	+				-0.7
17,615	+				-0.3
17,615	+				-0.9
17,615	+				-0.3
17,615	+				-0.3
17,615	+				+0.3
17,615	+				-2.5
17,615	+				+0.3
17,616	-				+0.1
17,616	-				+0.1
17,616	-				-1.1
17,624	+				-0.8
17,624	+				-0.9
17,624	+				-0.6
17,625	-				-1.5
17,629	+				+0.3
17,629	+				-1.5
17,629	+				-1.8
17,629	+				+0.6
17,630	-				-0.2
17,630	-				-0.5
17,630	-				-0.2
17,630	-				+0.2
17,630	-				-1.6
17,630	-				-0.3
17,633	+				+0.1
17,685	+				-0.4
17,819	+		GFF2298	0.13	+0.5
17,820	-		GFF2298	0.13	+1.1
17,820	-		GFF2298	0.13	-0.4
17,893	+		GFF2298	0.19	-0.8
17,893	+		GFF2298	0.19	+0.1
17,894	-		GFF2298	0.19	+0.1
17,898	+		GFF2298	0.20	-0.8
17,898	+		GFF2298	0.20	-2.1
17,898	+		GFF2298	0.20	+0.1
18,051	-		GFF2298	0.32	-1.2
18,051	-		GFF2298	0.32	+1.4
18,157	+		GFF2298	0.40	-1.9
18,157	+		GFF2298	0.40	+0.2
18,157	+		GFF2298	0.40	-0.8
18,158	-		GFF2298	0.40	-1.2
18,178	+		GFF2298	0.41	-0.9
18,184	+		GFF2298	0.42	-0.7
18,184	+		GFF2298	0.42	-0.3
18,185	-		GFF2298	0.42	-1.4
18,185	-		GFF2298	0.42	-0.9
18,199	+		GFF2298	0.43	-1.2
18,199	+		GFF2298	0.43	-1.2
18,199	+		GFF2298	0.43	-0.9
18,200	-		GFF2298	0.43	+0.3
18,207	-		GFF2298	0.44	-0.9
18,265	+		GFF2298	0.48	-0.3
18,298	+		GFF2298	0.51	-0.8
18,314	+		GFF2298	0.52	+0.2
18,315	-		GFF2298	0.52	+0.1
18,355	-		GFF2298	0.55	-0.2
18,355	-		GFF2298	0.55	+1.2
18,420	-		GFF2298	0.60	-1.9
18,451	+		GFF2298	0.63	-2.3
18,451	+		GFF2298	0.63	-0.4
18,451	+		GFF2298	0.63	-1.9
18,452	-		GFF2298	0.63	+0.1
18,483	+		GFF2298	0.65	+1.1
18,509	-		GFF2298	0.67	-0.7
18,509	-		GFF2298	0.67	+0.6
18,580	+		GFF2298	0.73	-2.3
18,581	-		GFF2298	0.73	+0.3
18,588	+		GFF2298	0.74	-1.1