Experiment: NL-CCM; ambient oxygen
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_04189 and MPMX19_04190 are separated by 3 nucleotides MPMX19_04190 and MPMX19_04191 are separated by 422 nucleotides
MPMX19_04189: MPMX19_04189 - hypothetical protein, at 519,960 to 522,302
_04189
MPMX19_04190: MPMX19_04190 - N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase, at 522,306 to 523,130
_04190
MPMX19_04191: MPMX19_04191 - hypothetical protein, at 523,553 to 525,835
_04191
Position (kb) 522
523
524 Strain fitness (log2 ratio) -2
-1
0
1
2 at 521.566 kb on + strand, within MPMX19_04189 at 521.566 kb on + strand, within MPMX19_04189 at 521.566 kb on + strand, within MPMX19_04189 at 521.566 kb on + strand, within MPMX19_04189 at 521.567 kb on - strand, within MPMX19_04189 at 521.567 kb on - strand, within MPMX19_04189 at 521.623 kb on + strand, within MPMX19_04189 at 521.624 kb on - strand, within MPMX19_04189 at 521.884 kb on + strand, within MPMX19_04189 at 521.884 kb on + strand, within MPMX19_04189 at 521.884 kb on + strand, within MPMX19_04189 at 521.884 kb on + strand, within MPMX19_04189 at 521.884 kb on + strand, within MPMX19_04189 at 521.884 kb on + strand, within MPMX19_04189 at 521.884 kb on + strand, within MPMX19_04189 at 521.884 kb on + strand, within MPMX19_04189 at 521.884 kb on + strand, within MPMX19_04189 at 521.884 kb on + strand, within MPMX19_04189 at 521.884 kb on + strand, within MPMX19_04189 at 521.884 kb on + strand, within MPMX19_04189 at 521.884 kb on + strand, within MPMX19_04189 at 521.884 kb on + strand, within MPMX19_04189 at 521.884 kb on + strand, within MPMX19_04189 at 521.884 kb on + strand, within MPMX19_04189 at 521.885 kb on - strand, within MPMX19_04189 at 521.885 kb on - strand, within MPMX19_04189 at 521.885 kb on - strand, within MPMX19_04189 at 521.885 kb on - strand, within MPMX19_04189 at 521.885 kb on - strand, within MPMX19_04189 at 521.885 kb on - strand, within MPMX19_04189 at 521.885 kb on - strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.068 kb on - strand at 522.068 kb on - strand at 522.068 kb on - strand at 522.068 kb on - strand at 522.068 kb on - strand at 522.068 kb on - strand at 522.068 kb on - strand at 522.068 kb on - strand at 522.068 kb on - strand at 522.068 kb on - strand at 522.068 kb on - strand at 522.068 kb on - strand at 522.068 kb on - strand at 522.068 kb on - strand at 522.068 kb on - strand at 522.068 kb on - strand at 522.068 kb on - strand at 522.068 kb on - strand at 522.068 kb on - strand at 522.068 kb on - strand at 522.068 kb on - strand at 522.068 kb on - strand at 522.068 kb on - strand at 522.068 kb on - strand at 522.068 kb on - strand at 522.068 kb on - strand at 522.068 kb on - strand at 522.068 kb on - strand at 522.068 kb on - strand at 522.068 kb on - strand at 522.068 kb on - strand at 522.457 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.739 kb on + strand, within MPMX19_04190 at 522.739 kb on + strand, within MPMX19_04190 at 522.805 kb on + strand, within MPMX19_04190 at 522.805 kb on + strand, within MPMX19_04190 at 522.805 kb on + strand, within MPMX19_04190 at 522.805 kb on + strand, within MPMX19_04190 at 522.805 kb on + strand, within MPMX19_04190 at 522.806 kb on - strand, within MPMX19_04190 at 522.806 kb on - strand, within MPMX19_04190 at 523.280 kb on + strand at 523.280 kb on + strand at 523.280 kb on + strand at 523.280 kb on + strand at 523.280 kb on + strand at 523.280 kb on + strand at 523.280 kb on + strand at 523.280 kb on + strand at 523.280 kb on + strand at 523.280 kb on + strand at 523.280 kb on + strand at 523.280 kb on + strand at 523.280 kb on + strand at 523.280 kb on + strand at 523.280 kb on + strand at 523.280 kb on + strand at 523.280 kb on + strand at 523.280 kb on + strand at 523.280 kb on + strand at 523.280 kb on + strand at 523.281 kb on - strand at 523.281 kb on - strand at 523.281 kb on - strand at 523.281 kb on - strand at 523.281 kb on - strand at 523.281 kb on - strand at 523.281 kb on - strand at 523.281 kb on - strand at 523.281 kb on - strand at 523.281 kb on - strand at 523.281 kb on - strand at 523.281 kb on - strand at 523.281 kb on - strand at 523.281 kb on - strand at 523.281 kb on - strand at 523.281 kb on - strand at 523.281 kb on - strand at 523.281 kb on - strand at 523.281 kb on - strand at 523.281 kb on - strand at 523.281 kb on - strand at 523.281 kb on - strand at 523.281 kb on - strand at 523.281 kb on - strand at 523.345 kb on - strand at 523.345 kb on - strand at 523.402 kb on + strand at 523.402 kb on + strand at 523.402 kb on + strand at 523.402 kb on + strand at 523.402 kb on + strand at 523.403 kb on - strand at 523.403 kb on - strand at 523.403 kb on - strand at 523.403 kb on - strand at 523.422 kb on - strand at 523.422 kb on - strand at 523.442 kb on + strand at 523.442 kb on + strand at 523.442 kb on + strand at 523.442 kb on + strand at 523.442 kb on + strand at 523.442 kb on + strand at 523.442 kb on + strand at 523.442 kb on + strand at 523.442 kb on + strand at 523.442 kb on + strand at 523.443 kb on - strand at 523.443 kb on - strand at 523.443 kb on - strand at 523.443 kb on - strand at 523.443 kb on - strand at 523.500 kb on + strand at 523.501 kb on - strand at 523.591 kb on + strand at 523.592 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM; ambient oxygen remove 521,566 + MPMX19_04189 0.69 +1.5 521,566 + MPMX19_04189 0.69 -0.4 521,566 + MPMX19_04189 0.69 +0.9 521,566 + MPMX19_04189 0.69 -1.3 521,567 - MPMX19_04189 0.69 +0.2 521,567 - MPMX19_04189 0.69 -0.4 521,623 + MPMX19_04189 0.71 +0.5 521,624 - MPMX19_04189 0.71 +0.1 521,884 + MPMX19_04189 0.82 +0.2 521,884 + MPMX19_04189 0.82 +0.5 521,884 + MPMX19_04189 0.82 -0.1 521,884 + MPMX19_04189 0.82 +0.8 521,884 + MPMX19_04189 0.82 +0.4 521,884 + MPMX19_04189 0.82 -0.9 521,884 + MPMX19_04189 0.82 +0.2 521,884 + MPMX19_04189 0.82 -0.5 521,884 + MPMX19_04189 0.82 -0.6 521,884 + MPMX19_04189 0.82 -0.2 521,884 + MPMX19_04189 0.82 -0.1 521,884 + MPMX19_04189 0.82 -0.1 521,884 + MPMX19_04189 0.82 -0.1 521,884 + MPMX19_04189 0.82 +0.2 521,884 + MPMX19_04189 0.82 -1.9 521,884 + MPMX19_04189 0.82 +0.1 521,885 - MPMX19_04189 0.82 -0.2 521,885 - MPMX19_04189 0.82 -2.2 521,885 - MPMX19_04189 0.82 +0.2 521,885 - MPMX19_04189 0.82 -1.7 521,885 - MPMX19_04189 0.82 -1.9 521,885 - MPMX19_04189 0.82 +0.8 521,885 - MPMX19_04189 0.82 -1.4 522,067 + MPMX19_04189 0.90 -2.3 522,067 + MPMX19_04189 0.90 +0.6 522,067 + MPMX19_04189 0.90 +0.3 522,067 + MPMX19_04189 0.90 -2.7 522,067 + MPMX19_04189 0.90 +1.3 522,067 + MPMX19_04189 0.90 -0.6 522,067 + MPMX19_04189 0.90 +0.2 522,067 + MPMX19_04189 0.90 +0.3 522,067 + MPMX19_04189 0.90 -0.7 522,067 + MPMX19_04189 0.90 -1.2 522,067 + MPMX19_04189 0.90 -0.7 522,067 + MPMX19_04189 0.90 +0.3 522,067 + MPMX19_04189 0.90 -0.9 522,067 + MPMX19_04189 0.90 +0.6 522,067 + MPMX19_04189 0.90 -1.5 522,067 + MPMX19_04189 0.90 -1.1 522,067 + MPMX19_04189 0.90 +1.3 522,067 + MPMX19_04189 0.90 -1.9 522,067 + MPMX19_04189 0.90 +0.1 522,067 + MPMX19_04189 0.90 -0.1 522,067 + MPMX19_04189 0.90 +0.1 522,067 + MPMX19_04189 0.90 -0.1 522,067 + MPMX19_04189 0.90 -0.1 522,067 + MPMX19_04189 0.90 -0.5 522,067 + MPMX19_04189 0.90 +0.5 522,067 + MPMX19_04189 0.90 +0.0 522,067 + MPMX19_04189 0.90 -1.1 522,067 + MPMX19_04189 0.90 -0.9 522,067 + MPMX19_04189 0.90 -1.2 522,067 + MPMX19_04189 0.90 -0.1 522,067 + MPMX19_04189 0.90 +0.2 522,067 + MPMX19_04189 0.90 +0.0 522,067 + MPMX19_04189 0.90 -1.4 522,067 + MPMX19_04189 0.90 -0.4 522,068 - +0.8 522,068 - +0.8 522,068 - -0.8 522,068 - -0.1 522,068 - -0.1 522,068 - +0.6 522,068 - +0.3 522,068 - -1.9 522,068 - -0.2 522,068 - -1.7 522,068 - +0.5 522,068 - -0.4 522,068 - -0.8 522,068 - +0.6 522,068 - +0.5 522,068 - +0.1 522,068 - -1.1 522,068 - +2.7 522,068 - +0.9 522,068 - -0.3 522,068 - -1.6 522,068 - -0.4 522,068 - -0.7 522,068 - -0.6 522,068 - +0.6 522,068 - +0.3 522,068 - -0.5 522,068 - -0.9 522,068 - -0.9 522,068 - +0.4 522,068 - -1.8 522,457 + MPMX19_04190 0.18 +0.8 522,700 + MPMX19_04190 0.48 -1.1 522,700 + MPMX19_04190 0.48 +0.8 522,700 + MPMX19_04190 0.48 -0.4 522,700 + MPMX19_04190 0.48 -0.1 522,700 + MPMX19_04190 0.48 +0.5 522,700 + MPMX19_04190 0.48 +0.9 522,700 + MPMX19_04190 0.48 +0.0 522,700 + MPMX19_04190 0.48 +1.1 522,700 + MPMX19_04190 0.48 -2.1 522,700 + MPMX19_04190 0.48 +1.4 522,700 + MPMX19_04190 0.48 -0.5 522,700 + MPMX19_04190 0.48 +0.3 522,700 + MPMX19_04190 0.48 +0.1 522,700 + MPMX19_04190 0.48 -0.2 522,700 + MPMX19_04190 0.48 +1.5 522,700 + MPMX19_04190 0.48 -0.5 522,700 + MPMX19_04190 0.48 -0.7 522,700 + MPMX19_04190 0.48 -1.5 522,700 + MPMX19_04190 0.48 -1.2 522,700 + MPMX19_04190 0.48 +0.6 522,700 + MPMX19_04190 0.48 +0.7 522,700 + MPMX19_04190 0.48 -1.8 522,700 + MPMX19_04190 0.48 -0.3 522,700 + MPMX19_04190 0.48 -1.1 522,700 + MPMX19_04190 0.48 +1.8 522,700 + MPMX19_04190 0.48 -1.1 522,700 + MPMX19_04190 0.48 +0.5 522,700 + MPMX19_04190 0.48 -0.2 522,700 + MPMX19_04190 0.48 +0.5 522,700 + MPMX19_04190 0.48 -0.4 522,700 + MPMX19_04190 0.48 +0.1 522,700 + MPMX19_04190 0.48 +0.2 522,700 + MPMX19_04190 0.48 -1.7 522,700 + MPMX19_04190 0.48 -0.1 522,700 + MPMX19_04190 0.48 -0.1 522,700 + MPMX19_04190 0.48 -0.2 522,700 + MPMX19_04190 0.48 -0.2 522,700 + MPMX19_04190 0.48 -0.1 522,700 + MPMX19_04190 0.48 +0.5 522,700 + MPMX19_04190 0.48 -0.1 522,700 + MPMX19_04190 0.48 -0.4 522,700 + MPMX19_04190 0.48 -0.1 522,701 - MPMX19_04190 0.48 -0.1 522,701 - MPMX19_04190 0.48 +0.1 522,701 - MPMX19_04190 0.48 +0.5 522,701 - MPMX19_04190 0.48 -0.5 522,701 - MPMX19_04190 0.48 -0.2 522,701 - MPMX19_04190 0.48 -0.5 522,701 - MPMX19_04190 0.48 +0.7 522,701 - MPMX19_04190 0.48 +1.6 522,701 - MPMX19_04190 0.48 -1.9 522,701 - MPMX19_04190 0.48 +1.3 522,701 - MPMX19_04190 0.48 -0.8 522,701 - MPMX19_04190 0.48 +0.1 522,701 - MPMX19_04190 0.48 +0.5 522,701 - MPMX19_04190 0.48 +1.9 522,701 - MPMX19_04190 0.48 +0.2 522,701 - MPMX19_04190 0.48 -1.8 522,701 - MPMX19_04190 0.48 +0.2 522,701 - MPMX19_04190 0.48 -0.4 522,701 - MPMX19_04190 0.48 +0.5 522,701 - MPMX19_04190 0.48 -0.7 522,701 - MPMX19_04190 0.48 -0.7 522,701 - MPMX19_04190 0.48 -0.3 522,701 - MPMX19_04190 0.48 +1.3 522,701 - MPMX19_04190 0.48 -0.3 522,701 - MPMX19_04190 0.48 -1.3 522,701 - MPMX19_04190 0.48 +0.3 522,701 - MPMX19_04190 0.48 +0.5 522,701 - MPMX19_04190 0.48 +0.1 522,701 - MPMX19_04190 0.48 +0.1 522,701 - MPMX19_04190 0.48 -0.9 522,701 - MPMX19_04190 0.48 +2.0 522,739 + MPMX19_04190 0.52 -0.8 522,739 + MPMX19_04190 0.52 +0.3 522,805 + MPMX19_04190 0.60 -0.3 522,805 + MPMX19_04190 0.60 -0.9 522,805 + MPMX19_04190 0.60 +0.6 522,805 + MPMX19_04190 0.60 +0.3 522,805 + MPMX19_04190 0.60 -0.5 522,806 - MPMX19_04190 0.61 -0.1 522,806 - MPMX19_04190 0.61 -0.3 523,280 + +1.0 523,280 + +1.0 523,280 + +2.5 523,280 + -1.1 523,280 + +0.2 523,280 + -0.3 523,280 + -0.7 523,280 + -0.9 523,280 + +0.5 523,280 + -2.0 523,280 + +0.4 523,280 + +0.5 523,280 + +0.7 523,280 + -0.5 523,280 + -0.2 523,280 + -1.1 523,280 + +0.1 523,280 + -0.5 523,280 + -1.6 523,280 + -1.4 523,281 - -0.8 523,281 - -0.9 523,281 - -0.9 523,281 - -1.8 523,281 - -0.2 523,281 - -0.3 523,281 - -0.7 523,281 - +0.3 523,281 - -1.3 523,281 - -1.3 523,281 - -0.3 523,281 - +0.7 523,281 - -0.7 523,281 - -1.1 523,281 - -2.2 523,281 - +0.3 523,281 - -1.7 523,281 - +0.5 523,281 - -0.1 523,281 - +1.2 523,281 - -0.4 523,281 - -1.7 523,281 - -0.8 523,281 - +0.1 523,345 - -0.7 523,345 - -0.5 523,402 + +0.9 523,402 + +1.2 523,402 + +0.4 523,402 + -0.1 523,402 + +0.3 523,403 - -0.6 523,403 - -0.3 523,403 - -0.4 523,403 - -0.7 523,422 - -0.7 523,422 - -0.2 523,442 + -1.2 523,442 + -0.5 523,442 + -0.6 523,442 + -0.6 523,442 + +0.5 523,442 + +1.9 523,442 + -0.9 523,442 + -0.1 523,442 + -0.9 523,442 + -0.6 523,443 - -0.5 523,443 - -1.3 523,443 - -0.4 523,443 - -2.2 523,443 - -0.9 523,500 + -1.1 523,501 - +0.0 523,591 + +0.1 523,592 - -0.5
Or see this region's nucleotide sequence