Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01924

Experiment: NL-CCM; ambient oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; ambient oxygen
2,008,445	+		MPMX19_01923	0.80	-0.8
2,008,445	+		MPMX19_01923	0.80	-0.4
2,008,445	+		MPMX19_01923	0.80	+0.5
2,008,445	+		MPMX19_01923	0.80	-0.5
2,008,445	+		MPMX19_01923	0.80	-0.7
2,008,445	+		MPMX19_01923	0.80	-0.7
2,008,445	+		MPMX19_01923	0.80	+0.5
2,008,446	-		MPMX19_01923	0.80	+0.7
2,008,446	-		MPMX19_01923	0.80	+1.1
2,008,446	-		MPMX19_01923	0.80	-1.1
2,008,446	-		MPMX19_01923	0.80	-0.7
2,008,446	-		MPMX19_01923	0.80	-0.4
2,008,446	-		MPMX19_01923	0.80	+0.2
2,008,446	-		MPMX19_01923	0.80	-0.3
2,008,446	-		MPMX19_01923	0.80	+0.6
2,008,446	-		MPMX19_01923	0.80	-1.8
2,008,446	-		MPMX19_01923	0.80	-0.5
2,008,499	+		MPMX19_01923	0.83	-1.7
2,008,499	+		MPMX19_01923	0.83	+0.5
2,008,499	+		MPMX19_01923	0.83	-1.8
2,008,499	+		MPMX19_01923	0.83	+0.4
2,008,499	+		MPMX19_01923	0.83	+0.3
2,008,499	+		MPMX19_01923	0.83	+1.0
2,008,499	+		MPMX19_01923	0.83	+0.8
2,008,499	+		MPMX19_01923	0.83	-1.0
2,008,500	-		MPMX19_01923	0.83	-0.1
2,008,500	-		MPMX19_01923	0.83	-1.1
2,008,500	-		MPMX19_01923	0.83	-0.4
2,008,500	-		MPMX19_01923	0.83	-0.3
2,008,500	-		MPMX19_01923	0.83	-1.2
2,008,500	-		MPMX19_01923	0.83	-1.2
2,008,500	-		MPMX19_01923	0.83	+0.3
2,008,500	-		MPMX19_01923	0.83	-0.8
2,008,500	-		MPMX19_01923	0.83	+0.7
2,008,511	+		MPMX19_01923	0.84	-0.5
2,008,511	+		MPMX19_01923	0.84	-0.7
2,008,511	+		MPMX19_01923	0.84	-1.1
2,008,511	+		MPMX19_01923	0.84	-0.4
2,008,511	+		MPMX19_01923	0.84	-0.2
2,008,511	+		MPMX19_01923	0.84	+0.8
2,008,511	+		MPMX19_01923	0.84	-0.3
2,008,511	+		MPMX19_01923	0.84	+0.5
2,008,511	+		MPMX19_01923	0.84	+0.1
2,008,511	+		MPMX19_01923	0.84	+1.0
2,008,511	+		MPMX19_01923	0.84	+0.1
2,008,511	+		MPMX19_01923	0.84	-0.1
2,008,511	+		MPMX19_01923	0.84	-1.1
2,008,511	+		MPMX19_01923	0.84	-0.1
2,008,512	-		MPMX19_01923	0.84	+0.8
2,008,512	-		MPMX19_01923	0.84	-0.2
2,008,512	-		MPMX19_01923	0.84	-0.5
2,008,512	-		MPMX19_01923	0.84	-0.5
2,008,512	-		MPMX19_01923	0.84	+1.3
2,008,512	-		MPMX19_01923	0.84	-0.5
2,008,512	-		MPMX19_01923	0.84	-0.1
2,008,512	-		MPMX19_01923	0.84	-0.0
2,008,512	-		MPMX19_01923	0.84	-0.3
2,008,512	-		MPMX19_01923	0.84	-0.8
2,008,512	-		MPMX19_01923	0.84	-1.3
2,008,512	-		MPMX19_01923	0.84	-0.4
2,008,512	-		MPMX19_01923	0.84	-0.1
2,008,512	-		MPMX19_01923	0.84	-0.4
2,008,512	-		MPMX19_01923	0.84	+0.5
2,008,512	-		MPMX19_01923	0.84	-0.4
2,008,689	+				+0.0
2,008,689	+				+0.9
2,008,689	+				+0.1
2,008,689	+				+1.1
2,008,689	+				+0.1
2,008,689	+				-0.4
2,008,689	+				+0.7
2,008,689	+				+0.1
2,008,689	+				+0.5
2,008,689	+				-1.2
2,008,689	+				-1.2
2,008,689	+				+0.6
2,008,689	+				+0.2
2,008,689	+				-0.8
2,008,689	+				+0.2
2,008,689	+				+1.1
2,008,689	+				-0.4
2,008,689	+				+0.8
2,008,689	+				-0.2
2,008,689	+				-1.0
2,008,689	+				-1.1
2,008,689	+				+0.1
2,008,690	-				-1.7
2,008,690	-				+0.1
2,008,690	-				-0.1
2,008,690	-				+0.5
2,008,690	-				-0.3
2,008,690	-				+0.8
2,008,690	-				+0.4
2,008,690	-				-1.5
2,008,690	-				+0.2
2,008,690	-				+0.0
2,008,690	-				+0.4
2,008,690	-				-0.8
2,008,690	-				+0.2
2,008,690	-				-2.1
2,008,691	+				+0.2
2,008,691	+				-1.0
2,008,691	+				+0.0
2,008,691	+				-0.4
2,008,691	+				-0.9
2,008,691	+				-0.1
2,008,691	+				-0.4
2,008,691	+				+0.2
2,008,691	+				-1.5
2,008,691	+				+0.2
2,008,691	+				-0.9
2,008,691	+				-0.6
2,008,691	+				-0.8
2,008,692	-				-2.4
2,008,692	-				-1.8
2,008,692	-				+0.4
2,008,692	-				-1.5
2,008,692	-				-1.8
2,008,692	-				+0.3
2,008,692	-				-0.8
2,008,692	-				+0.1
2,008,692	-				-1.1
2,008,692	-				-0.2
2,008,829	+				+1.9
2,008,830	-				-0.8
2,008,850	+				+0.0
2,008,850	+				+0.1
2,008,850	+				-2.0
2,008,850	+				+0.0
2,008,850	+				-0.2
2,008,850	+				-1.0
2,008,850	+				-0.4
2,008,850	+				+0.2
2,008,850	+				+1.3
2,008,850	+				-1.3
2,008,850	+				+0.3
2,008,850	+				-1.4
2,008,850	+				-1.7
2,008,850	+				-1.8
2,008,850	+				-1.7
2,008,850	+				+0.6
2,008,850	+				+0.2
2,008,850	+				+0.7
2,008,850	+				-0.9
2,008,850	+				-0.6
2,008,850	+				-1.0
2,008,850	+				-0.5
2,008,850	+				-2.7
2,008,850	+				-2.0
2,008,850	+				+1.0
2,008,850	+				-0.7
2,008,850	+				-2.1
2,008,850	+				+0.5
2,008,850	+				+0.2
2,008,850	+				+1.2
2,008,850	+				+0.2
2,008,850	+				+1.0
2,008,850	+				-0.1
2,008,850	+				-0.3
2,008,850	+				+0.8
2,008,851	-				-0.8
2,008,851	-				-0.8
2,008,851	-				-0.4
2,008,851	-				-2.6
2,008,851	-				-0.5
2,008,851	-				+1.2
2,008,851	-				-0.6
2,008,851	-				+0.1
2,008,851	-				+1.0
2,008,851	-				-0.3
2,008,851	-				+0.7
2,008,851	-				+1.5
2,008,851	-				-0.1
2,008,851	-				+0.6
2,008,851	-				-0.5
2,008,851	-				-2.6
2,008,851	-				+0.3
2,008,851	-				-0.9
2,008,851	-				+0.0
2,008,851	-				+1.3
2,008,851	-				-0.2
2,008,851	-				-1.3
2,008,851	-				+0.1
2,008,851	-				+0.1
2,008,851	-				-1.0
2,008,852	+				-0.5
2,008,852	+				+1.2
2,008,852	+				+0.2
2,008,852	+				-0.3
2,008,852	+				+0.5
2,008,852	+				-0.1
2,008,852	+				-0.3
2,008,852	+				-0.1
2,008,852	+				+1.3
2,008,852	+				-0.7
2,008,852	+				+0.9
2,008,852	+				+0.1
2,008,852	+				-1.7
2,008,852	+				-1.7
2,008,852	+				-0.2
2,008,853	-				+0.5
2,008,853	-				-0.3
2,008,853	-				-0.3
2,008,853	-				-0.3
2,008,853	-				+0.6
2,008,853	-				-0.5
2,008,853	-				-0.4
2,008,853	-				-0.7
2,008,853	-				-0.2
2,008,853	-				-0.4
2,008,853	-				-2.1
2,008,853	-				-0.1
2,009,323	+				-2.2
2,009,324	-				+0.3
2,009,324	-				-1.9
2,009,324	-				-0.1
2,009,435	+		MPMX19_01925	0.18	-0.7
2,009,435	+		MPMX19_01925	0.18	-0.1
2,009,435	+		MPMX19_01925	0.18	-0.4
2,009,435	+		MPMX19_01925	0.18	+0.3
2,009,435	+		MPMX19_01925	0.18	-0.0
2,009,435	+		MPMX19_01925	0.18	-1.0
2,009,435	+		MPMX19_01925	0.18	-0.8
2,009,435	+		MPMX19_01925	0.18	+0.2
2,009,435	+		MPMX19_01925	0.18	-0.3
2,009,435	+		MPMX19_01925	0.18	+0.6
2,009,435	+		MPMX19_01925	0.18	-0.8
2,009,435	+		MPMX19_01925	0.18	-1.0
2,009,435	+		MPMX19_01925	0.18	-0.3
2,009,435	+		MPMX19_01925	0.18	-0.4
2,009,435	+		MPMX19_01925	0.18	-0.4
2,009,435	+		MPMX19_01925	0.18	+0.9
2,009,435	+		MPMX19_01925	0.18	-0.3
2,009,435	+		MPMX19_01925	0.18	-0.6
2,009,435	+		MPMX19_01925	0.18	+0.5
2,009,435	+		MPMX19_01925	0.18	-0.6
2,009,436	-		MPMX19_01925	0.18	+0.2
2,009,436	-		MPMX19_01925	0.18	-0.3
2,009,436	-		MPMX19_01925	0.18	-0.1
2,009,436	-		MPMX19_01925	0.18	-1.2
2,009,436	-		MPMX19_01925	0.18	+0.8
2,009,436	-		MPMX19_01925	0.18	+0.8
2,009,436	-		MPMX19_01925	0.18	-0.7
2,009,436	-		MPMX19_01925	0.18	-1.3
2,009,436	-		MPMX19_01925	0.18	+0.9
2,009,436	-		MPMX19_01925	0.18	-0.8
2,009,436	-		MPMX19_01925	0.18	+0.0
2,009,436	-		MPMX19_01925	0.18	-1.0
2,009,436	-		MPMX19_01925	0.18	+0.0
2,009,436	-		MPMX19_01925	0.18	-0.2
2,009,436	-		MPMX19_01925	0.18	+1.2
2,009,436	-		MPMX19_01925	0.18	+0.4
2,009,436	-		MPMX19_01925	0.18	-0.8
2,009,436	-		MPMX19_01925	0.18	-0.3
2,009,436	-		MPMX19_01925	0.18	+0.3
2,009,436	-		MPMX19_01925	0.18	-1.6
2,009,436	-		MPMX19_01925	0.18	-2.9
2,009,436	-		MPMX19_01925	0.18	-1.5
2,009,517	+		MPMX19_01925	0.37	-0.0
2,009,517	+		MPMX19_01925	0.37	+0.6
2,009,517	+		MPMX19_01925	0.37	-0.3
2,009,517	+		MPMX19_01925	0.37	+0.9
2,009,517	+		MPMX19_01925	0.37	-1.1
2,009,518	-		MPMX19_01925	0.37	-0.5
2,009,518	-		MPMX19_01925	0.37	-0.8
2,009,648	+		MPMX19_01925	0.67	+0.1
2,009,648	+		MPMX19_01925	0.67	-0.5
2,009,648	+		MPMX19_01925	0.67	-0.6
2,009,648	+		MPMX19_01925	0.67	-0.2
2,009,648	+		MPMX19_01925	0.67	-0.7
2,009,648	+		MPMX19_01925	0.67	-0.5
2,009,648	+		MPMX19_01925	0.67	+1.1
2,009,648	+		MPMX19_01925	0.67	-0.1
2,009,648	+		MPMX19_01925	0.67	-0.1
2,009,649	-		MPMX19_01925	0.68	+1.5
2,009,649	-		MPMX19_01925	0.68	-0.8
2,009,705	+		MPMX19_01925	0.81	+0.1
2,009,705	+		MPMX19_01925	0.81	-0.8
2,009,705	+		MPMX19_01925	0.81	-2.4
2,009,706	-		MPMX19_01925	0.81	-1.0
2,009,706	-		MPMX19_01925	0.81	+0.8
2,009,706	-		MPMX19_01925	0.81	-0.2
2,009,714	+		MPMX19_01925	0.83	+1.3
2,009,714	+		MPMX19_01925	0.83	+0.8
2,009,714	+		MPMX19_01925	0.83	-0.3
2,009,714	+		MPMX19_01925	0.83	+0.0
2,009,714	+		MPMX19_01925	0.83	+0.7
2,009,714	+		MPMX19_01925	0.83	-0.4
2,009,715	-		MPMX19_01925	0.83	+0.4
2,009,715	-		MPMX19_01925	0.83	+1.1
2,009,715	-		MPMX19_01925	0.83	+1.1
2,009,715	-		MPMX19_01925	0.83	+0.7
2,009,715	-		MPMX19_01925	0.83	+0.1
2,009,753	+				+0.7
2,009,753	+				-0.3
2,009,813	+				+0.3
2,009,813	+				-2.2
2,009,813	+				-0.4
2,009,813	+				-1.3
2,009,813	+				-0.1
2,009,813	+				-2.0
2,009,813	+				-0.6
2,009,813	+				+1.3
2,009,813	+				-0.3
2,009,813	+				+0.5
2,009,814	-				-0.8
2,009,814	-				+0.4
2,009,814	-				+0.6
2,009,814	-				-0.8
2,009,814	-				-1.5
2,009,814	-				-0.8
2,009,814	-				+1.3
2,009,822	-				-0.4
2,009,846	+				+0.8
2,009,847	-				+2.2
2,009,847	-				+0.1
2,009,939	+				+0.0
2,009,939	+				-1.9
2,009,939	+				-0.4
2,009,939	+				+0.0
2,009,939	+				-0.3
2,009,939	+				+1.8
2,009,939	+				-0.4
2,009,939	+				+0.9
2,009,939	+				+0.7
2,009,939	+				-0.5
2,009,940	-				-0.4
2,009,940	-				-0.7
2,009,940	-				+0.0
2,009,940	-				+0.2
2,009,940	-				+0.6
2,009,940	-				+0.3
2,010,028	+				+1.7
2,010,029	-				-1.3
2,010,029	-				+0.1
2,010,046	+				-0.1
2,010,046	+				+0.0
2,010,046	+				+1.2
2,010,046	+				-0.2
2,010,046	+				-0.5
2,010,046	+				-0.1
2,010,046	+				+0.9
2,010,046	+				+0.2
2,010,046	+				-0.2
2,010,046	+				-0.7
2,010,047	-				-1.3
2,010,047	-				-1.1
2,010,047	-				-0.6
2,010,047	-				+1.1
2,010,047	-				+1.3
2,010,047	-				+0.8
2,010,047	-				+0.0
2,010,047	-				+0.6
2,010,047	-				-0.1
2,010,047	-				+1.1
2,010,047	-				+0.8
2,010,057	+				+0.3
2,010,057	+				-0.1
2,010,057	+				-0.5
2,010,057	+				+0.8
2,010,057	+				-0.3
2,010,057	+				+0.7
2,010,057	+				+1.3
2,010,057	+				-0.2
2,010,058	-				-0.4
2,010,058	-				+0.6
2,010,058	-				-1.4
2,010,058	-				+0.6
2,010,058	-				+0.3
2,010,058	-				-0.1
2,010,058	-				-0.1
2,010,058	-				+0.4
2,010,058	-				+0.3
2,010,058	-				+0.5
2,010,058	-				+0.4
2,010,058	-				+0.4
2,010,058	-				+1.2
2,010,061	+				+1.5
2,010,061	+				+0.0
2,010,061	+				-0.1
2,010,061	+				-1.3
2,010,061	+				-0.2
2,010,061	+				-1.2
2,010,061	+				-1.1
2,010,061	+				-0.3
2,010,061	+				+0.5
2,010,061	+				+0.2
2,010,061	+				+0.6
2,010,061	+				-1.5
2,010,061	+				+0.5
2,010,061	+				-0.1
2,010,062	-				-0.4
2,010,062	-				-0.1
2,010,062	-				+0.7
2,010,062	-				-0.5
2,010,062	-				-0.6
2,010,062	-				+0.3
2,010,062	-				-0.2
2,010,062	-				-0.2
2,010,062	-				+0.5
2,010,062	-				+0.1
2,010,062	-				+0.7
2,010,062	-				+0.3
2,010,155	-		MPMX19_01926	0.21	+0.2
2,010,155	-		MPMX19_01926	0.21	+0.2
2,010,155	-		MPMX19_01926	0.21	+0.1
2,010,155	-		MPMX19_01926	0.21	+0.2
2,010,155	-		MPMX19_01926	0.21	+0.1
2,010,163	+		MPMX19_01926	0.23	-1.5
2,010,163	+		MPMX19_01926	0.23	-0.4
2,010,163	+		MPMX19_01926	0.23	-0.1
2,010,163	+		MPMX19_01926	0.23	-0.3
2,010,164	-		MPMX19_01926	0.23	-0.6
2,010,164	-		MPMX19_01926	0.23	+1.0
2,010,164	-		MPMX19_01926	0.23	+1.7
2,010,164	-		MPMX19_01926	0.23	+0.2
2,010,164	-		MPMX19_01926	0.23	-0.0
2,010,164	-		MPMX19_01926	0.23	-0.7
2,010,164	-		MPMX19_01926	0.23	+0.1