Strain Fitness in Azospirillum sp. SherDot2

Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01528

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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Per-strain Table

Position	Strand	LocusTag	Fraction	NL-CCM; ambient oxygen
				remove
1,600,349	+	MPMX19_01526	0.38	+0.5
1,600,349	+	MPMX19_01526	0.38	+0.1
1,600,349	+	MPMX19_01526	0.38	-0.3
1,600,349	+	MPMX19_01526	0.38	-1.2
1,600,349	+	MPMX19_01526	0.38	-0.6
1,600,349	+	MPMX19_01526	0.38	+1.1
1,600,349	+	MPMX19_01526	0.38	-0.8
1,600,349	+	MPMX19_01526	0.38	-0.3
1,600,349	+	MPMX19_01526	0.38	+0.7
1,600,349	+	MPMX19_01526	0.38	+0.6
1,600,349	+	MPMX19_01526	0.38	-0.4
1,600,349	+	MPMX19_01526	0.38	+0.5
1,600,349	+	MPMX19_01526	0.38	-1.0
1,600,349	+	MPMX19_01526	0.38	+0.7
1,600,349	+	MPMX19_01526	0.38	-0.4
1,600,349	+	MPMX19_01526	0.38	-1.3
1,600,350	-	MPMX19_01526	0.38	+0.9
1,600,350	-	MPMX19_01526	0.38	+0.3
1,600,350	-	MPMX19_01526	0.38	+0.5
1,600,350	-	MPMX19_01526	0.38	+0.0
1,600,350	-	MPMX19_01526	0.38	-1.1
1,600,760	+	MPMX19_01526	0.86	+0.2
1,600,760	+	MPMX19_01526	0.86	+0.6
1,600,760	+	MPMX19_01526	0.86	+1.4
1,600,760	+	MPMX19_01526	0.86	+1.5
1,600,760	+	MPMX19_01526	0.86	-0.1
1,600,761	-	MPMX19_01526	0.86	-1.3
1,600,761	-	MPMX19_01526	0.86	-0.4
1,600,761	-	MPMX19_01526	0.86	+1.2
1,600,817	+			+0.0
1,600,817	+			-0.1
1,600,817	+			-1.0
1,600,817	+			+0.5
1,600,818	-			+0.0
1,600,818	-			+0.5
1,600,883	+			-0.5
1,600,883	+			+0.2
1,600,884	-			+2.5
1,600,884	-			+0.0
1,600,884	-			-0.5
1,600,974	+			+0.9
1,600,974	+			-0.4
1,600,974	+			-0.5
1,600,974	+			-1.1
1,600,974	+			-0.5
1,600,974	+			-0.1
1,600,975	-			-0.4
1,600,975	-			+0.5
1,600,975	-			+0.0
1,600,975	-			-1.0
1,601,271	+			-0.1
1,601,271	+			-0.6
1,601,271	+			-0.6
1,601,272	-			-0.7
1,601,323	+			-2.5
1,601,323	+			+0.3
1,601,323	+			+0.1
1,601,323	+			-1.1
1,601,324	-			-1.3
1,601,348	+			+0.5
1,601,348	+			+2.0
1,601,348	+			-0.4
1,601,349	-			+1.5
1,601,349	-			+0.7
1,601,349	-			-1.3
1,601,349	-			+0.3
1,601,349	-			+1.2
1,601,384	+			-1.3
1,601,384	+			-2.7
1,601,384	+			-1.9
1,601,384	+			+1.5
1,601,384	+			+1.5
1,601,384	+			-0.5
1,601,384	+			-0.5
1,601,384	+			-1.7
1,601,384	+			+1.3
1,601,385	-			-1.2
1,601,385	-			+0.3
1,601,385	-			+0.7
1,601,385	-			-1.1
1,601,435	+			+0.5
1,601,435	+			-0.5
1,601,435	+			-1.1
1,601,435	+			+1.2
1,601,435	+			-0.3
1,601,435	+			+2.0
1,601,435	+			+0.6
1,601,435	+			-0.9
1,601,435	+			+0.1
1,601,435	+			-0.3
1,601,435	+			+1.0
1,601,435	+			-0.1
1,601,435	+			-1.3
1,601,435	+			+0.5
1,601,435	+			-0.3
1,601,436	-			-0.1
1,601,436	-			-0.9
1,601,436	-			+0.0
1,601,436	-			-0.6
1,601,436	-			-0.3
1,601,436	-			+0.2
1,601,436	-			-1.3
1,601,436	-			-0.4
1,601,436	-			+0.2
1,601,436	-			-0.7
1,601,436	-			-1.1
1,601,468	+			+0.1
1,601,468	+			-0.3
1,601,468	+			-0.3
1,601,469	-			+0.7
1,601,469	-			-0.3
1,601,469	-			+0.1
1,601,469	-			+0.1
1,601,469	-			-0.8
1,601,469	-			-0.5
1,601,469	-			+0.2
1,601,507	+	MPMX19_01528	0.12	+0.7
1,601,508	-	MPMX19_01528	0.12	-0.5
1,601,508	-	MPMX19_01528	0.12	+0.3
1,601,508	-	MPMX19_01528	0.12	-1.6
1,601,508	-	MPMX19_01528	0.12	+0.6
1,601,513	+	MPMX19_01528	0.13	-0.5
1,601,513	+	MPMX19_01528	0.13	-0.0
1,601,514	-	MPMX19_01528	0.13	-0.7
1,601,514	-	MPMX19_01528	0.13	-1.7
1,601,514	-	MPMX19_01528	0.13	+0.6
1,601,514	-	MPMX19_01528	0.13	+0.3
1,601,514	-	MPMX19_01528	0.13	+0.2
1,601,514	-	MPMX19_01528	0.13	-0.2
1,601,514	-	MPMX19_01528	0.13	-0.4
1,601,514	-	MPMX19_01528	0.13	+0.1
1,601,565	+	MPMX19_01528	0.17	-0.2
1,601,566	-	MPMX19_01528	0.17	-1.0
1,601,566	-	MPMX19_01528	0.17	+0.3
1,601,566	-	MPMX19_01528	0.17	+0.4
1,601,566	-	MPMX19_01528	0.17	-0.9
1,601,566	-	MPMX19_01528	0.17	-1.0
1,601,621	+	MPMX19_01528	0.21	+0.0
1,601,621	+	MPMX19_01528	0.21	+0.2
1,601,621	+	MPMX19_01528	0.21	-0.3
1,601,621	+	MPMX19_01528	0.21	-2.3
1,601,621	+	MPMX19_01528	0.21	-1.9
1,601,622	-	MPMX19_01528	0.21	-0.1
1,601,622	-	MPMX19_01528	0.21	-1.6
1,601,622	-	MPMX19_01528	0.21	+0.5
1,601,628	+	MPMX19_01528	0.21	+1.1
1,601,628	+	MPMX19_01528	0.21	-1.0
1,601,629	-	MPMX19_01528	0.21	-0.2
1,601,629	-	MPMX19_01528	0.21	-1.5
1,601,630	+	MPMX19_01528	0.21	-0.8
1,601,630	+	MPMX19_01528	0.21	+1.5
1,601,630	+	MPMX19_01528	0.21	-1.5
1,601,630	+	MPMX19_01528	0.21	-0.3
1,601,630	+	MPMX19_01528	0.21	-0.4
1,601,630	+	MPMX19_01528	0.21	+1.0
1,601,631	-	MPMX19_01528	0.22	-1.1
1,601,631	-	MPMX19_01528	0.22	-0.5
1,601,631	-	MPMX19_01528	0.22	-1.8
1,601,663	+	MPMX19_01528	0.24	-0.5
1,601,663	+	MPMX19_01528	0.24	-1.1
1,601,663	+	MPMX19_01528	0.24	-0.0
1,601,663	+	MPMX19_01528	0.24	+0.1
1,601,663	+	MPMX19_01528	0.24	-1.7
1,601,663	+	MPMX19_01528	0.24	+0.1
1,601,663	+	MPMX19_01528	0.24	-0.4
1,601,663	+	MPMX19_01528	0.24	+0.5
1,601,663	+	MPMX19_01528	0.24	-0.1
1,601,663	+	MPMX19_01528	0.24	-0.8
1,601,664	-	MPMX19_01528	0.24	+0.9
1,601,664	-	MPMX19_01528	0.24	+0.6
1,601,664	-	MPMX19_01528	0.24	+0.7
1,601,664	-	MPMX19_01528	0.24	-0.8
1,601,664	-	MPMX19_01528	0.24	+0.5
1,601,664	-	MPMX19_01528	0.24	-0.2
1,601,664	-	MPMX19_01528	0.24	-1.3
1,601,664	-	MPMX19_01528	0.24	-0.6
1,601,664	-	MPMX19_01528	0.24	+0.1
1,601,664	-	MPMX19_01528	0.24	-1.3
1,601,664	-	MPMX19_01528	0.24	-0.7
1,601,664	-	MPMX19_01528	0.24	-1.4
1,601,664	-	MPMX19_01528	0.24	-0.2
1,601,664	-	MPMX19_01528	0.24	-0.6
1,601,717	+	MPMX19_01528	0.28	-2.0
1,601,717	+	MPMX19_01528	0.28	-0.1
1,601,717	+	MPMX19_01528	0.28	+0.1
1,601,717	+	MPMX19_01528	0.28	+0.7
1,601,717	+	MPMX19_01528	0.28	+1.1
1,601,717	+	MPMX19_01528	0.28	-1.1
1,601,717	+	MPMX19_01528	0.28	+0.1
1,601,717	+	MPMX19_01528	0.28	+0.2
1,601,717	+	MPMX19_01528	0.28	-0.9
1,601,717	+	MPMX19_01528	0.28	+0.2
1,601,717	+	MPMX19_01528	0.28	-0.6
1,601,717	+	MPMX19_01528	0.28	+0.3
1,601,717	+	MPMX19_01528	0.28	+0.0
1,601,717	+	MPMX19_01528	0.28	+0.8
1,601,718	-	MPMX19_01528	0.28	-0.1
1,601,718	-	MPMX19_01528	0.28	-0.5
1,601,718	-	MPMX19_01528	0.28	+1.5
1,601,718	-	MPMX19_01528	0.28	-1.1
1,601,718	-	MPMX19_01528	0.28	+0.1
1,601,718	-	MPMX19_01528	0.28	-0.3
1,601,718	-	MPMX19_01528	0.28	-0.1
1,601,718	-	MPMX19_01528	0.28	+0.3
1,601,718	-	MPMX19_01528	0.28	+0.3
1,601,718	-	MPMX19_01528	0.28	+1.5
1,601,718	-	MPMX19_01528	0.28	+0.5
1,601,718	-	MPMX19_01528	0.28	+0.3
1,601,718	-	MPMX19_01528	0.28	-1.7
1,601,810	+	MPMX19_01528	0.35	+0.1
1,601,810	+	MPMX19_01528	0.35	+1.0
1,601,810	+	MPMX19_01528	0.35	+0.1
1,601,810	+	MPMX19_01528	0.35	-0.9
1,601,811	-	MPMX19_01528	0.35	-0.3
1,601,811	-	MPMX19_01528	0.35	-1.3
1,601,811	-	MPMX19_01528	0.35	-2.0
1,601,811	-	MPMX19_01528	0.35	+1.0
1,601,811	-	MPMX19_01528	0.35	-1.3
1,601,846	+	MPMX19_01528	0.38	-1.1
1,601,846	+	MPMX19_01528	0.38	+0.5
1,601,846	+	MPMX19_01528	0.38	-2.1
1,601,846	+	MPMX19_01528	0.38	-2.3
1,601,847	-	MPMX19_01528	0.38	+0.2
1,601,847	-	MPMX19_01528	0.38	-1.1
1,601,847	-	MPMX19_01528	0.38	+0.0
1,601,847	-	MPMX19_01528	0.38	-0.4
1,601,847	-	MPMX19_01528	0.38	+0.3
1,601,847	-	MPMX19_01528	0.38	+0.7
1,601,847	-	MPMX19_01528	0.38	-1.5
1,601,847	-	MPMX19_01528	0.38	-0.8
1,601,852	+	MPMX19_01528	0.38	-0.4
1,601,852	+	MPMX19_01528	0.38	-1.1
1,601,852	+	MPMX19_01528	0.38	-1.3
1,601,852	+	MPMX19_01528	0.38	-0.5
1,601,852	+	MPMX19_01528	0.38	-1.0
1,601,852	+	MPMX19_01528	0.38	+0.6
1,601,852	+	MPMX19_01528	0.38	-0.3
1,601,852	+	MPMX19_01528	0.38	+1.0
1,601,853	-	MPMX19_01528	0.38	-1.4
1,601,853	-	MPMX19_01528	0.38	-0.4
1,601,853	-	MPMX19_01528	0.38	+0.4
1,601,912	+	MPMX19_01528	0.43	-2.2
1,601,912	+	MPMX19_01528	0.43	-0.6
1,601,912	+	MPMX19_01528	0.43	-0.4
1,601,912	+	MPMX19_01528	0.43	+1.0
1,601,912	+	MPMX19_01528	0.43	-0.1
1,601,912	+	MPMX19_01528	0.43	+0.5
1,601,912	+	MPMX19_01528	0.43	-0.9
1,601,912	+	MPMX19_01528	0.43	-0.5
1,601,912	+	MPMX19_01528	0.43	+0.3
1,601,912	+	MPMX19_01528	0.43	-1.0
1,601,912	+	MPMX19_01528	0.43	-0.2
1,601,912	+	MPMX19_01528	0.43	-1.3
1,601,912	+	MPMX19_01528	0.43	+0.1
1,601,912	+	MPMX19_01528	0.43	-1.0
1,601,912	+	MPMX19_01528	0.43	-0.7
1,601,912	+	MPMX19_01528	0.43	-1.3
1,601,912	+	MPMX19_01528	0.43	+0.9
1,601,912	+	MPMX19_01528	0.43	-0.4
1,601,912	+	MPMX19_01528	0.43	-0.1
1,601,912	+	MPMX19_01528	0.43	+0.5
1,601,912	+	MPMX19_01528	0.43	+0.2
1,601,912	+	MPMX19_01528	0.43	-1.5
1,601,912	+	MPMX19_01528	0.43	-1.7
1,601,912	+	MPMX19_01528	0.43	+0.2
1,601,912	+	MPMX19_01528	0.43	-0.3
1,601,912	+	MPMX19_01528	0.43	+0.7
1,601,912	+	MPMX19_01528	0.43	-2.0
1,601,912	+	MPMX19_01528	0.43	+0.5
1,601,912	+	MPMX19_01528	0.43	+1.0
1,601,913	-	MPMX19_01528	0.43	+0.9
1,601,913	-	MPMX19_01528	0.43	+0.1
1,601,913	-	MPMX19_01528	0.43	-0.3
1,601,913	-	MPMX19_01528	0.43	+0.9
1,601,913	-	MPMX19_01528	0.43	-0.1
1,601,913	-	MPMX19_01528	0.43	+0.1
1,601,913	-	MPMX19_01528	0.43	-0.3
1,601,913	-	MPMX19_01528	0.43	-0.1
1,601,913	-	MPMX19_01528	0.43	-0.9
1,601,913	-	MPMX19_01528	0.43	-1.2
1,601,913	-	MPMX19_01528	0.43	+0.2
1,601,913	-	MPMX19_01528	0.43	+0.2
1,601,913	-	MPMX19_01528	0.43	-0.7
1,601,913	-	MPMX19_01528	0.43	-0.3
1,601,913	-	MPMX19_01528	0.43	+0.3
1,601,913	-	MPMX19_01528	0.43	-0.3
1,601,913	-	MPMX19_01528	0.43	-0.4
1,601,913	-	MPMX19_01528	0.43	-0.8
1,601,913	-	MPMX19_01528	0.43	+0.2
1,601,913	-	MPMX19_01528	0.43	+1.0
1,601,913	-	MPMX19_01528	0.43	+0.8
1,601,913	-	MPMX19_01528	0.43	-1.8
1,601,913	-	MPMX19_01528	0.43	+0.1
1,601,913	-	MPMX19_01528	0.43	+0.1
1,601,913	-	MPMX19_01528	0.43	+1.0
1,601,936	+	MPMX19_01528	0.45	+0.0
1,601,936	+	MPMX19_01528	0.45	-0.9
1,601,936	+	MPMX19_01528	0.45	+0.7
1,601,937	-	MPMX19_01528	0.45	-1.0
1,601,937	-	MPMX19_01528	0.45	-0.4
1,602,406	+	MPMX19_01528	0.80	+0.3
1,602,666	+			-1.9
1,602,666	+			-0.3
1,602,702	+			-1.3
1,602,702	+			+0.3
1,602,702	+			-2.0
1,602,702	+			+1.1
1,602,702	+			-0.1
1,602,703	-			-2.2
1,602,703	-			+0.5
1,602,703	-			+1.1
1,602,703	-			-0.9
1,602,721	-	MPMX19_01529	0.12	-1.1
1,603,036	+			+0.4
1,603,036	+			+0.6
1,603,036	+			+0.8
1,603,036	+			+0.6
1,603,036	+			-0.9
1,603,036	+			-0.4
1,603,036	+			-0.3
1,603,036	+			-1.2
1,603,036	+			+1.5
1,603,036	+			-0.0
1,603,036	+			-2.5
1,603,036	+			+0.7
1,603,036	+			-0.8
1,603,036	+			+0.4
1,603,036	+			+1.1
1,603,037	-			-1.3
1,603,037	-			-0.9
1,603,037	-			+0.6
1,603,037	-			-0.1
1,603,037	-			+0.9
1,603,037	-			+0.6
1,603,037	-			+1.5
1,603,037	-			+0.3
1,603,052	+			+0.5
1,603,052	+			-0.5
1,603,052	+			+1.0
1,603,052	+			-0.9
1,603,052	+			+0.3
1,603,052	+			-0.0
1,603,052	+			-1.2
1,603,052	+			-1.1
1,603,052	+			-0.1
1,603,052	+			+0.5
1,603,052	+			-1.5
1,603,052	+			-2.6
1,603,053	-			-0.3
1,603,053	-			+0.1
1,603,053	-			-0.9
1,603,053	-			+0.2
1,603,053	-			+0.7
1,603,053	-			-0.7
1,603,053	-			-0.4
1,603,053	-			-1.5
1,603,053	-			+0.9
1,603,053	-			-0.9
1,603,053	-			+0.5
1,603,053	-			-2.1
1,603,053	-			-0.3
1,603,053	-			-1.4
1,603,053	-			-1.2
1,603,131	+	MPMX19_01530	0.13	-0.2
1,603,131	+	MPMX19_01530	0.13	+0.5
1,603,131	+	MPMX19_01530	0.13	+0.2
1,603,131	+	MPMX19_01530	0.13	-2.4
1,603,132	-	MPMX19_01530	0.14	+0.1
1,603,132	-	MPMX19_01530	0.14	-0.3
1,603,132	-	MPMX19_01530	0.14	-0.2
1,603,132	-	MPMX19_01530	0.14	-1.2
1,603,132	-	MPMX19_01530	0.14	-1.2
1,603,132	-	MPMX19_01530	0.14	-1.1
1,603,132	-	MPMX19_01530	0.14	-0.0
1,603,145	+	MPMX19_01530	0.17	-1.7
1,603,145	+	MPMX19_01530	0.17	-0.5
1,603,145	+	MPMX19_01530	0.17	-0.5
1,603,145	+	MPMX19_01530	0.17	+0.2
1,603,145	+	MPMX19_01530	0.17	-0.0
1,603,146	-	MPMX19_01530	0.18	-1.7
1,603,146	-	MPMX19_01530	0.18	+0.0
1,603,146	-	MPMX19_01530	0.18	-2.0
1,603,146	-	MPMX19_01530	0.18	-2.2
1,603,146	-	MPMX19_01530	0.18	-0.3
1,603,146	-	MPMX19_01530	0.18	+1.5
1,603,146	-	MPMX19_01530	0.18	-0.7
1,603,441	+			+0.5
1,603,441	+			+1.0
1,603,442	-			-0.5
1,603,442	-			+0.3
1,603,442	-			+0.9
1,603,442	-			+1.0
1,603,442	-			-0.2
1,603,442	-			+1.1
1,603,610	+	MPMX19_01531	0.18	-0.1
1,603,610	+	MPMX19_01531	0.18	-0.5
1,603,610	+	MPMX19_01531	0.18	-1.1
1,603,611	-	MPMX19_01531	0.18	-1.4
1,603,611	-	MPMX19_01531	0.18	-0.1
1,603,611	-	MPMX19_01531	0.18	-0.5
1,603,611	-	MPMX19_01531	0.18	+1.2
1,603,637	+	MPMX19_01531	0.22	+0.6
1,603,637	+	MPMX19_01531	0.22	-0.0
1,603,637	+	MPMX19_01531	0.22	+0.0
1,603,637	+	MPMX19_01531	0.22	+0.1
1,603,637	+	MPMX19_01531	0.22	-0.2
1,603,637	+	MPMX19_01531	0.22	-0.6
1,603,637	+	MPMX19_01531	0.22	+0.3
1,603,637	+	MPMX19_01531	0.22	-0.8
1,603,637	+	MPMX19_01531	0.22	-0.7
1,603,637	+	MPMX19_01531	0.22	-1.0
1,603,637	+	MPMX19_01531	0.22	-0.8
1,603,637	+	MPMX19_01531	0.22	-1.3
1,603,637	+	MPMX19_01531	0.22	+0.3
1,603,637	+	MPMX19_01531	0.22	-0.3
1,603,637	+	MPMX19_01531	0.22	+0.4
1,603,637	+	MPMX19_01531	0.22	+0.3
1,603,637	+	MPMX19_01531	0.22	+0.8
1,603,637	+	MPMX19_01531	0.22	-1.2
1,603,637	+	MPMX19_01531	0.22	-1.2
1,603,637	+	MPMX19_01531	0.22	-0.3
1,603,637	+	MPMX19_01531	0.22	+0.5
1,603,637	+	MPMX19_01531	0.22	-0.0
1,603,638	-	MPMX19_01531	0.23	-1.6
1,603,638	-	MPMX19_01531	0.23	+0.6
1,603,638	-	MPMX19_01531	0.23	-2.0
1,603,638	-	MPMX19_01531	0.23	-0.3
1,603,638	-	MPMX19_01531	0.23	+1.1
1,603,638	-	MPMX19_01531	0.23	-1.5
1,603,638	-	MPMX19_01531	0.23	-0.6
1,603,638	-	MPMX19_01531	0.23	+1.2
1,603,638	-	MPMX19_01531	0.23	-0.1
1,603,638	-	MPMX19_01531	0.23	-0.5
1,603,638	-	MPMX19_01531	0.23	+0.3
1,603,638	-	MPMX19_01531	0.23	+0.1
1,603,638	-	MPMX19_01531	0.23	+0.0
1,603,638	-	MPMX19_01531	0.23	-1.7
1,603,638	-	MPMX19_01531	0.23	-0.5

Or see this region's nucleotide sequence