Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01511

Experiment: NL-CCM; ambient oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; ambient oxygen
1,582,888	+				-0.1
1,582,888	+				+0.5
1,582,888	+				-1.4
1,582,888	+				-1.7
1,582,889	-				-0.3
1,582,889	-				-1.0
1,583,261	+		MPMX19_01510	0.55	-0.8
1,583,261	+		MPMX19_01510	0.55	+0.1
1,583,261	+		MPMX19_01510	0.55	+0.7
1,583,261	+		MPMX19_01510	0.55	-0.3
1,583,261	+		MPMX19_01510	0.55	+0.4
1,583,261	+		MPMX19_01510	0.55	-0.0
1,583,261	+		MPMX19_01510	0.55	-0.1
1,583,261	+		MPMX19_01510	0.55	-0.1
1,583,261	+		MPMX19_01510	0.55	-1.7
1,583,261	+		MPMX19_01510	0.55	-0.6
1,583,262	-		MPMX19_01510	0.55	-0.5
1,583,262	-		MPMX19_01510	0.55	+0.3
1,583,262	-		MPMX19_01510	0.55	+1.1
1,583,262	-		MPMX19_01510	0.55	-0.1
1,583,262	-		MPMX19_01510	0.55	-0.1
1,583,262	-		MPMX19_01510	0.55	-0.7
1,583,567	+				-2.2
1,583,567	+				-0.0
1,583,568	-				+0.5
1,583,568	-				-0.1
1,583,600	+				-0.7
1,583,600	+				-0.1
1,583,600	+				+0.7
1,583,600	+				-1.5
1,583,600	+				+0.3
1,583,600	+				-0.6
1,583,600	+				-0.1
1,583,600	+				-2.1
1,583,600	+				+0.5
1,583,600	+				-1.0
1,583,601	-				+1.5
1,583,601	-				-1.1
1,583,601	-				+0.6
1,583,601	-				-0.1
1,583,601	-				-0.7
1,583,601	-				-0.1
1,583,601	-				-1.1
1,583,601	-				-0.6
1,583,601	-				-0.8
1,583,601	-				-1.3
1,583,601	-				-0.6
1,583,601	-				-1.1
1,583,610	+				+1.5
1,583,610	+				-0.5
1,583,610	+				+0.1
1,583,611	-				+0.3
1,583,611	-				-0.7
1,583,611	-				-0.2
1,583,611	-				-0.1
1,583,611	-				+0.3
1,583,611	-				+0.1
1,583,676	+				-0.4
1,583,676	+				+0.5
1,583,676	+				-0.5
1,583,677	-				-0.3
1,583,677	-				-0.5
1,583,677	-				-1.1
1,583,677	-				+0.5
1,583,706	+				+0.2
1,583,819	+		MPMX19_01511	0.15	-0.1
1,583,819	+		MPMX19_01511	0.15	-0.1
1,583,819	+		MPMX19_01511	0.15	-1.6
1,583,819	+		MPMX19_01511	0.15	+0.2
1,583,819	+		MPMX19_01511	0.15	+0.2
1,583,819	+		MPMX19_01511	0.15	-0.5
1,583,819	+		MPMX19_01511	0.15	+2.5
1,583,819	+		MPMX19_01511	0.15	-0.0
1,583,819	+		MPMX19_01511	0.15	+0.5
1,583,819	+		MPMX19_01511	0.15	-0.5
1,583,819	+		MPMX19_01511	0.15	-1.0
1,583,819	+		MPMX19_01511	0.15	-0.1
1,583,819	+		MPMX19_01511	0.15	-0.7
1,583,819	+		MPMX19_01511	0.15	+0.0
1,583,819	+		MPMX19_01511	0.15	-0.4
1,583,819	+		MPMX19_01511	0.15	+0.2
1,583,820	-		MPMX19_01511	0.15	-0.5
1,583,820	-		MPMX19_01511	0.15	+0.1
1,583,820	-		MPMX19_01511	0.15	-2.1
1,583,820	-		MPMX19_01511	0.15	+0.8
1,583,820	-		MPMX19_01511	0.15	-1.1
1,583,820	-		MPMX19_01511	0.15	+0.2
1,583,820	-		MPMX19_01511	0.15	-0.5
1,583,820	-		MPMX19_01511	0.15	-1.2
1,583,820	-		MPMX19_01511	0.15	-0.1
1,583,820	-		MPMX19_01511	0.15	-2.0
1,583,843	+		MPMX19_01511	0.17	-0.5
1,583,843	+		MPMX19_01511	0.17	+1.2
1,583,843	+		MPMX19_01511	0.17	-0.7
1,583,843	+		MPMX19_01511	0.17	-0.5
1,583,843	+		MPMX19_01511	0.17	+0.3
1,583,843	+		MPMX19_01511	0.17	+0.5
1,583,843	+		MPMX19_01511	0.17	-0.0
1,583,843	+		MPMX19_01511	0.17	-2.0
1,583,843	+		MPMX19_01511	0.17	-0.1
1,583,843	+		MPMX19_01511	0.17	+1.0
1,583,843	+		MPMX19_01511	0.17	-0.7
1,583,843	+		MPMX19_01511	0.17	+0.2
1,583,843	+		MPMX19_01511	0.17	+0.5
1,583,843	+		MPMX19_01511	0.17	+0.5
1,583,843	+		MPMX19_01511	0.17	-0.5
1,583,843	+		MPMX19_01511	0.17	-0.4
1,583,843	+		MPMX19_01511	0.17	-0.6
1,583,843	+		MPMX19_01511	0.17	+0.2
1,583,843	+		MPMX19_01511	0.17	+0.6
1,583,843	+		MPMX19_01511	0.17	-3.4
1,583,843	+		MPMX19_01511	0.17	-0.4
1,583,843	+		MPMX19_01511	0.17	-0.1
1,583,843	+		MPMX19_01511	0.17	+0.6
1,583,843	+		MPMX19_01511	0.17	-1.4
1,583,843	+		MPMX19_01511	0.17	+1.5
1,583,843	+		MPMX19_01511	0.17	-1.7
1,583,843	+		MPMX19_01511	0.17	-0.2
1,583,843	+		MPMX19_01511	0.17	-0.5
1,583,843	+		MPMX19_01511	0.17	+0.6
1,583,843	+		MPMX19_01511	0.17	-0.4
1,583,843	+		MPMX19_01511	0.17	-0.1
1,583,843	+		MPMX19_01511	0.17	-1.1
1,583,843	+		MPMX19_01511	0.17	-1.4
1,583,843	+		MPMX19_01511	0.17	-0.3
1,583,843	+		MPMX19_01511	0.17	+0.9
1,583,843	+		MPMX19_01511	0.17	+0.5
1,583,843	+		MPMX19_01511	0.17	-0.9
1,583,843	+		MPMX19_01511	0.17	-0.8
1,583,843	+		MPMX19_01511	0.17	+0.3
1,583,844	-		MPMX19_01511	0.18	+0.3
1,583,844	-		MPMX19_01511	0.18	-0.5
1,583,844	-		MPMX19_01511	0.18	-0.9
1,583,844	-		MPMX19_01511	0.18	+1.1
1,583,844	-		MPMX19_01511	0.18	+0.8
1,583,844	-		MPMX19_01511	0.18	+0.5
1,583,844	-		MPMX19_01511	0.18	+0.3
1,583,844	-		MPMX19_01511	0.18	+0.5
1,583,844	-		MPMX19_01511	0.18	-0.0
1,583,844	-		MPMX19_01511	0.18	+0.1
1,583,844	-		MPMX19_01511	0.18	-0.4
1,583,844	-		MPMX19_01511	0.18	+0.0
1,583,844	-		MPMX19_01511	0.18	-0.1
1,583,844	-		MPMX19_01511	0.18	-0.5
1,583,844	-		MPMX19_01511	0.18	-0.3
1,583,844	-		MPMX19_01511	0.18	-2.0
1,583,844	-		MPMX19_01511	0.18	+0.9
1,583,844	-		MPMX19_01511	0.18	-0.4
1,583,844	-		MPMX19_01511	0.18	+0.0
1,583,844	-		MPMX19_01511	0.18	-0.0
1,583,844	-		MPMX19_01511	0.18	+0.1
1,583,844	-		MPMX19_01511	0.18	-0.5
1,583,844	-		MPMX19_01511	0.18	+0.9
1,583,844	-		MPMX19_01511	0.18	-1.5
1,583,844	-		MPMX19_01511	0.18	-0.2
1,583,844	-		MPMX19_01511	0.18	+0.1
1,583,844	-		MPMX19_01511	0.18	+0.1
1,583,844	-		MPMX19_01511	0.18	+0.0
1,583,844	-		MPMX19_01511	0.18	+0.6
1,583,844	-		MPMX19_01511	0.18	-0.5
1,583,844	-		MPMX19_01511	0.18	+0.3
1,583,844	-		MPMX19_01511	0.18	-0.2
1,583,844	-		MPMX19_01511	0.18	+0.3
1,583,844	-		MPMX19_01511	0.18	-0.1
1,583,844	-		MPMX19_01511	0.18	-0.7
1,583,844	-		MPMX19_01511	0.18	-0.3
1,583,844	-		MPMX19_01511	0.18	+0.6
1,583,844	-		MPMX19_01511	0.18	-0.4
1,583,879	+		MPMX19_01511	0.21	-1.1
1,583,879	+		MPMX19_01511	0.21	-0.4
1,583,879	+		MPMX19_01511	0.21	-0.8
1,583,879	+		MPMX19_01511	0.21	-0.5
1,583,975	+		MPMX19_01511	0.32	+0.1
1,583,975	+		MPMX19_01511	0.32	+0.3
1,583,975	+		MPMX19_01511	0.32	+1.3
1,583,975	+		MPMX19_01511	0.32	-0.1
1,583,975	+		MPMX19_01511	0.32	-1.1
1,583,976	-		MPMX19_01511	0.32	+0.5
1,583,976	-		MPMX19_01511	0.32	-0.3
1,583,976	-		MPMX19_01511	0.32	-1.0
1,583,976	-		MPMX19_01511	0.32	+1.3
1,583,976	-		MPMX19_01511	0.32	-0.1
1,583,976	-		MPMX19_01511	0.32	+0.0
1,583,976	-		MPMX19_01511	0.32	-1.6
1,583,976	-		MPMX19_01511	0.32	-0.7
1,583,981	+		MPMX19_01511	0.33	+1.6
1,583,981	+		MPMX19_01511	0.33	+0.5
1,583,981	+		MPMX19_01511	0.33	+1.0
1,583,982	-		MPMX19_01511	0.33	+0.3
1,583,982	-		MPMX19_01511	0.33	-0.2
1,583,993	+		MPMX19_01511	0.34	-0.5
1,583,993	+		MPMX19_01511	0.34	-0.9
1,583,993	+		MPMX19_01511	0.34	-0.0
1,583,993	+		MPMX19_01511	0.34	+0.0
1,583,993	+		MPMX19_01511	0.34	-0.3
1,583,993	+		MPMX19_01511	0.34	+1.1
1,583,993	+		MPMX19_01511	0.34	-0.1
1,583,993	+		MPMX19_01511	0.34	-1.5
1,583,993	+		MPMX19_01511	0.34	-0.8
1,583,993	+		MPMX19_01511	0.34	+0.8
1,583,993	+		MPMX19_01511	0.34	-0.0
1,583,993	+		MPMX19_01511	0.34	+1.0
1,583,994	-		MPMX19_01511	0.34	-2.5
1,583,994	-		MPMX19_01511	0.34	+0.3
1,583,994	-		MPMX19_01511	0.34	+0.5
1,583,994	-		MPMX19_01511	0.34	+0.3
1,583,994	-		MPMX19_01511	0.34	-1.9
1,583,994	-		MPMX19_01511	0.34	+1.2
1,583,994	-		MPMX19_01511	0.34	-1.7
1,583,994	-		MPMX19_01511	0.34	-0.9
1,583,994	-		MPMX19_01511	0.34	+0.7
1,583,994	-		MPMX19_01511	0.34	+0.5
1,583,994	-		MPMX19_01511	0.34	+0.8
1,583,994	-		MPMX19_01511	0.34	+0.4
1,584,266	+		MPMX19_01511	0.65	+0.6
1,584,266	+		MPMX19_01511	0.65	-1.1
1,584,266	+		MPMX19_01511	0.65	+0.0
1,584,266	+		MPMX19_01511	0.65	+0.0
1,584,266	+		MPMX19_01511	0.65	-1.4
1,584,267	-		MPMX19_01511	0.65	-1.8
1,584,267	-		MPMX19_01511	0.65	+0.2
1,584,267	-		MPMX19_01511	0.65	+0.5
1,584,267	-		MPMX19_01511	0.65	-1.8
1,584,267	-		MPMX19_01511	0.65	-0.5
1,584,267	-		MPMX19_01511	0.65	-1.1
1,584,386	+		MPMX19_01511	0.78	-0.3
1,584,386	+		MPMX19_01511	0.78	-0.2
1,584,386	+		MPMX19_01511	0.78	-2.2
1,584,387	-		MPMX19_01511	0.78	-0.5
1,584,387	-		MPMX19_01511	0.78	-0.5
1,584,581	+				-1.0
1,584,582	-				-0.9
1,584,582	-				+0.7
1,584,582	-				-1.0
1,584,582	-				+0.5
1,584,672	+				+0.1
1,584,672	+				-1.1
1,584,672	+				+0.3
1,584,672	+				-0.1
1,584,672	+				+0.3
1,584,672	+				+0.9
1,584,672	+				+0.0
1,584,672	+				+1.5
1,584,672	+				-0.3
1,584,672	+				+0.5
1,584,672	+				-0.5
1,584,672	+				+0.6
1,584,672	+				+1.9
1,584,672	+				-1.9
1,584,673	-				+1.0
1,584,673	-				-1.4
1,584,673	-				-0.6
1,584,673	-				-0.5
1,584,673	-				+0.5
1,584,673	-				-1.4
1,584,673	-				+0.2
1,584,673	-				+0.5
1,584,673	-				-1.5
1,584,673	-				+0.1
1,584,673	-				-0.8
1,584,822	+		MPMX19_01512	0.30	-1.5
1,585,012	+		MPMX19_01512	0.56	-0.4
1,585,012	+		MPMX19_01512	0.56	-0.1
1,585,013	-		MPMX19_01512	0.56	-1.4
1,585,013	-		MPMX19_01512	0.56	-0.3
1,585,013	-		MPMX19_01512	0.56	+0.0
1,585,013	-		MPMX19_01512	0.56	-0.8
1,585,018	+		MPMX19_01512	0.57	-0.5
1,585,018	+		MPMX19_01512	0.57	+2.2
1,585,018	+		MPMX19_01512	0.57	-0.3
1,585,019	-		MPMX19_01512	0.57	-0.5
1,585,039	+		MPMX19_01512	0.60	+0.6
1,585,039	+		MPMX19_01512	0.60	-0.9
1,585,039	+		MPMX19_01512	0.60	+0.6
1,585,039	+		MPMX19_01512	0.60	-0.7
1,585,039	+		MPMX19_01512	0.60	+0.2
1,585,039	+		MPMX19_01512	0.60	-1.5
1,585,039	+		MPMX19_01512	0.60	-0.5
1,585,040	-		MPMX19_01512	0.60	-0.5
1,585,040	-		MPMX19_01512	0.60	+0.7
1,585,040	-		MPMX19_01512	0.60	-0.5
1,585,040	-		MPMX19_01512	0.60	+0.5
1,585,040	-		MPMX19_01512	0.60	+0.1
1,585,040	-		MPMX19_01512	0.60	+1.5
1,585,040	-		MPMX19_01512	0.60	-0.1
1,585,040	-		MPMX19_01512	0.60	-0.9
1,585,040	-		MPMX19_01512	0.60	+0.2
1,585,040	-		MPMX19_01512	0.60	-0.0
1,585,040	-		MPMX19_01512	0.60	-0.1
1,585,040	-		MPMX19_01512	0.60	-0.5
1,585,128	+		MPMX19_01512	0.72	-0.1
1,585,128	+		MPMX19_01512	0.72	+0.2
1,585,128	+		MPMX19_01512	0.72	+0.0
1,585,128	+		MPMX19_01512	0.72	-2.5
1,585,128	+		MPMX19_01512	0.72	+0.2
1,585,129	-		MPMX19_01512	0.72	-0.2
1,585,129	-		MPMX19_01512	0.72	-0.9