Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_04153

Experiment: lib only

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOHPLBJKB_04152 and OHPLBJKB_04153 overlap by 1 nucleotidesOHPLBJKB_04153 and OHPLBJKB_04154 are separated by 49 nucleotides OHPLBJKB_04152: OHPLBJKB_04152 - Putative aminopeptidase YsdC, at 4,366,881 to 4,367,951 _04152 OHPLBJKB_04153: OHPLBJKB_04153 - hypothetical protein, at 4,367,951 to 4,369,705 _04153 OHPLBJKB_04154: OHPLBJKB_04154 - hypothetical protein, at 4,369,755 to 4,370,810 _04154 Position (kb) 4367 4368 4369 4370Strain fitness (log2 ratio) -2 -1 0 1 2at 4367.025 kb on - strand, within OHPLBJKB_04152at 4367.033 kb on + strand, within OHPLBJKB_04152at 4367.063 kb on + strand, within OHPLBJKB_04152at 4367.063 kb on + strand, within OHPLBJKB_04152at 4367.063 kb on + strand, within OHPLBJKB_04152at 4367.063 kb on + strand, within OHPLBJKB_04152at 4367.063 kb on + strand, within OHPLBJKB_04152at 4367.064 kb on - strand, within OHPLBJKB_04152at 4367.064 kb on - strand, within OHPLBJKB_04152at 4367.064 kb on - strand, within OHPLBJKB_04152at 4367.064 kb on - strand, within OHPLBJKB_04152at 4367.064 kb on - strand, within OHPLBJKB_04152at 4367.064 kb on - strand, within OHPLBJKB_04152at 4367.064 kb on - strand, within OHPLBJKB_04152at 4367.082 kb on - strand, within OHPLBJKB_04152at 4367.120 kb on + strand, within OHPLBJKB_04152at 4367.121 kb on - strand, within OHPLBJKB_04152at 4367.121 kb on - strand, within OHPLBJKB_04152at 4367.174 kb on - strand, within OHPLBJKB_04152at 4367.465 kb on + strand, within OHPLBJKB_04152at 4367.465 kb on + strand, within OHPLBJKB_04152at 4367.466 kb on - strand, within OHPLBJKB_04152at 4367.537 kb on + strand, within OHPLBJKB_04152at 4367.537 kb on + strand, within OHPLBJKB_04152at 4367.597 kb on + strand, within OHPLBJKB_04152at 4367.598 kb on - strand, within OHPLBJKB_04152at 4367.603 kb on + strand, within OHPLBJKB_04152at 4367.603 kb on + strand, within OHPLBJKB_04152at 4367.603 kb on + strand, within OHPLBJKB_04152at 4367.603 kb on + strand, within OHPLBJKB_04152at 4367.603 kb on + strand, within OHPLBJKB_04152at 4367.603 kb on + strand, within OHPLBJKB_04152at 4367.604 kb on - strand, within OHPLBJKB_04152at 4367.604 kb on - strand, within OHPLBJKB_04152at 4367.604 kb on - strand, within OHPLBJKB_04152at 4367.658 kb on + strand, within OHPLBJKB_04152at 4367.658 kb on + strand, within OHPLBJKB_04152at 4367.680 kb on + strand, within OHPLBJKB_04152at 4367.708 kb on + strand, within OHPLBJKB_04152at 4367.708 kb on + strand, within OHPLBJKB_04152at 4367.709 kb on - strand, within OHPLBJKB_04152at 4367.767 kb on - strand, within OHPLBJKB_04152at 4367.821 kb on - strand, within OHPLBJKB_04152at 4367.860 kb on - strandat 4367.902 kb on + strandat 4367.903 kb on - strandat 4367.903 kb on - strandat 4367.956 kb on - strandat 4367.971 kb on - strandat 4368.062 kb on - strandat 4368.062 kb on - strandat 4368.068 kb on + strandat 4368.069 kb on - strandat 4368.069 kb on - strandat 4368.182 kb on - strand, within OHPLBJKB_04153at 4368.208 kb on - strand, within OHPLBJKB_04153at 4368.211 kb on - strand, within OHPLBJKB_04153at 4368.217 kb on + strand, within OHPLBJKB_04153at 4368.217 kb on + strand, within OHPLBJKB_04153at 4368.218 kb on - strand, within OHPLBJKB_04153at 4368.273 kb on + strand, within OHPLBJKB_04153at 4368.305 kb on + strand, within OHPLBJKB_04153at 4368.305 kb on + strand, within OHPLBJKB_04153at 4368.435 kb on + strand, within OHPLBJKB_04153at 4368.459 kb on + strand, within OHPLBJKB_04153at 4368.459 kb on + strand, within OHPLBJKB_04153at 4368.509 kb on + strand, within OHPLBJKB_04153at 4368.509 kb on + strand, within OHPLBJKB_04153at 4368.509 kb on + strand, within OHPLBJKB_04153at 4368.510 kb on - strand, within OHPLBJKB_04153at 4368.510 kb on - strand, within OHPLBJKB_04153at 4368.536 kb on + strand, within OHPLBJKB_04153at 4368.547 kb on + strand, within OHPLBJKB_04153at 4368.591 kb on + strand, within OHPLBJKB_04153at 4368.592 kb on - strand, within OHPLBJKB_04153at 4368.639 kb on + strand, within OHPLBJKB_04153at 4368.639 kb on + strand, within OHPLBJKB_04153at 4368.640 kb on - strand, within OHPLBJKB_04153at 4368.640 kb on - strand, within OHPLBJKB_04153at 4368.687 kb on + strand, within OHPLBJKB_04153at 4368.687 kb on + strand, within OHPLBJKB_04153at 4368.688 kb on - strand, within OHPLBJKB_04153at 4368.688 kb on - strand, within OHPLBJKB_04153at 4368.688 kb on - strand, within OHPLBJKB_04153at 4368.749 kb on - strand, within OHPLBJKB_04153at 4368.749 kb on - strand, within OHPLBJKB_04153at 4368.790 kb on - strand, within OHPLBJKB_04153at 4368.790 kb on - strand, within OHPLBJKB_04153at 4368.790 kb on - strand, within OHPLBJKB_04153at 4368.792 kb on + strand, within OHPLBJKB_04153at 4368.792 kb on + strand, within OHPLBJKB_04153at 4368.792 kb on + strand, within OHPLBJKB_04153at 4368.895 kb on + strand, within OHPLBJKB_04153at 4368.898 kb on + strand, within OHPLBJKB_04153at 4368.899 kb on - strand, within OHPLBJKB_04153at 4368.903 kb on + strand, within OHPLBJKB_04153at 4368.903 kb on + strand, within OHPLBJKB_04153at 4369.094 kb on - strand, within OHPLBJKB_04153at 4369.094 kb on - strand, within OHPLBJKB_04153at 4369.161 kb on - strand, within OHPLBJKB_04153at 4369.183 kb on + strand, within OHPLBJKB_04153at 4369.318 kb on - strand, within OHPLBJKB_04153at 4369.339 kb on + strand, within OHPLBJKB_04153at 4369.339 kb on + strand, within OHPLBJKB_04153at 4369.381 kb on + strand, within OHPLBJKB_04153at 4369.381 kb on + strand, within OHPLBJKB_04153at 4369.382 kb on - strand, within OHPLBJKB_04153at 4369.605 kb on + strandat 4369.610 kb on - strandat 4369.614 kb on - strandat 4369.626 kb on + strandat 4369.626 kb on + strandat 4369.626 kb on + strandat 4369.627 kb on - strandat 4369.627 kb on - strandat 4369.627 kb on - strandat 4369.627 kb on - strandat 4369.681 kb on + strandat 4369.682 kb on - strandat 4369.682 kb on - strandat 4369.682 kb on - strandat 4369.689 kb on + strandat 4369.689 kb on + strandat 4369.740 kb on + strandat 4369.741 kb on - strandat 4369.767 kb on - strandat 4369.769 kb on + strandat 4369.769 kb on + strandat 4369.769 kb on + strandat 4369.770 kb on - strandat 4369.770 kb on - strandat 4369.771 kb on + strandat 4369.771 kb on + strandat 4369.771 kb on + strandat 4369.771 kb on + strandat 4369.771 kb on + strandat 4369.771 kb on + strandat 4369.771 kb on + strandat 4369.771 kb on + strandat 4369.771 kb on + strandat 4369.772 kb on - strandat 4369.772 kb on - strandat 4369.772 kb on - strandat 4369.772 kb on - strandat 4369.772 kb on - strandat 4369.793 kb on - strandat 4369.801 kb on - strandat 4370.102 kb on - strand, within OHPLBJKB_04154at 4370.276 kb on + strand, within OHPLBJKB_04154at 4370.296 kb on + strand, within OHPLBJKB_04154at 4370.318 kb on + strand, within OHPLBJKB_04154at 4370.345 kb on + strand, within OHPLBJKB_04154at 4370.346 kb on - strand, within OHPLBJKB_04154at 4370.346 kb on - strand, within OHPLBJKB_04154at 4370.347 kb on + strand, within OHPLBJKB_04154at 4370.347 kb on + strand, within OHPLBJKB_04154at 4370.347 kb on + strand, within OHPLBJKB_04154at 4370.348 kb on - strand, within OHPLBJKB_04154at 4370.348 kb on - strand, within OHPLBJKB_04154at 4370.348 kb on - strand, within OHPLBJKB_04154at 4370.449 kb on + strand, within OHPLBJKB_04154at 4370.450 kb on - strand, within OHPLBJKB_04154at 4370.465 kb on + strand, within OHPLBJKB_04154at 4370.480 kb on + strand, within OHPLBJKB_04154at 4370.547 kb on + strand, within OHPLBJKB_04154at 4370.557 kb on + strand, within OHPLBJKB_04154at 4370.567 kb on + strand, within OHPLBJKB_04154at 4370.569 kb on + strand, within OHPLBJKB_04154at 4370.570 kb on - strand, within OHPLBJKB_04154at 4370.570 kb on - strand, within OHPLBJKB_04154at 4370.570 kb on - strand, within OHPLBJKB_04154at 4370.636 kb on + strand, within OHPLBJKB_04154at 4370.637 kb on - strand, within OHPLBJKB_04154at 4370.637 kb on - strand, within OHPLBJKB_04154at 4370.637 kb on - strand, within OHPLBJKB_04154at 4370.666 kb on + strand, within OHPLBJKB_04154at 4370.667 kb on - strand, within OHPLBJKB_04154

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Per-strain Table

Position Strand Gene LocusTag Fraction lib only
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4,367,025 - OHPLBJKB_04152 0.13 +0.1
4,367,033 + OHPLBJKB_04152 0.14 +0.0
4,367,063 + OHPLBJKB_04152 0.17 -1.1
4,367,063 + OHPLBJKB_04152 0.17 -0.1
4,367,063 + OHPLBJKB_04152 0.17 -0.4
4,367,063 + OHPLBJKB_04152 0.17 +0.1
4,367,063 + OHPLBJKB_04152 0.17 +0.3
4,367,064 - OHPLBJKB_04152 0.17 +0.5
4,367,064 - OHPLBJKB_04152 0.17 +0.4
4,367,064 - OHPLBJKB_04152 0.17 -0.5
4,367,064 - OHPLBJKB_04152 0.17 +0.5
4,367,064 - OHPLBJKB_04152 0.17 -0.2
4,367,064 - OHPLBJKB_04152 0.17 +2.1
4,367,064 - OHPLBJKB_04152 0.17 +0.5
4,367,082 - OHPLBJKB_04152 0.19 -0.5
4,367,120 + OHPLBJKB_04152 0.22 -1.0
4,367,121 - OHPLBJKB_04152 0.22 +0.8
4,367,121 - OHPLBJKB_04152 0.22 -0.6
4,367,174 - OHPLBJKB_04152 0.27 +0.1
4,367,465 + OHPLBJKB_04152 0.55 +0.0
4,367,465 + OHPLBJKB_04152 0.55 -1.7
4,367,466 - OHPLBJKB_04152 0.55 +0.4
4,367,537 + OHPLBJKB_04152 0.61 -0.3
4,367,537 + OHPLBJKB_04152 0.61 +0.6
4,367,597 + OHPLBJKB_04152 0.67 -0.4
4,367,598 - OHPLBJKB_04152 0.67 -0.8
4,367,603 + OHPLBJKB_04152 0.67 -0.1
4,367,603 + OHPLBJKB_04152 0.67 -0.5
4,367,603 + OHPLBJKB_04152 0.67 -0.2
4,367,603 + OHPLBJKB_04152 0.67 -2.3
4,367,603 + OHPLBJKB_04152 0.67 -0.6
4,367,603 + OHPLBJKB_04152 0.67 -0.5
4,367,604 - OHPLBJKB_04152 0.68 -0.2
4,367,604 - OHPLBJKB_04152 0.68 +0.9
4,367,604 - OHPLBJKB_04152 0.68 -0.3
4,367,658 + OHPLBJKB_04152 0.73 -0.4
4,367,658 + OHPLBJKB_04152 0.73 +1.5
4,367,680 + OHPLBJKB_04152 0.75 -1.1
4,367,708 + OHPLBJKB_04152 0.77 -0.2
4,367,708 + OHPLBJKB_04152 0.77 -0.9
4,367,709 - OHPLBJKB_04152 0.77 -0.5
4,367,767 - OHPLBJKB_04152 0.83 -0.1
4,367,821 - OHPLBJKB_04152 0.88 +0.5
4,367,860 - +0.0
4,367,902 + -1.0
4,367,903 - +0.4
4,367,903 - +0.6
4,367,956 - -1.1
4,367,971 - +1.0
4,368,062 - -0.3
4,368,062 - +0.2
4,368,068 + -0.2
4,368,069 - -0.1
4,368,069 - +0.1
4,368,182 - OHPLBJKB_04153 0.13 +0.5
4,368,208 - OHPLBJKB_04153 0.15 -0.5
4,368,211 - OHPLBJKB_04153 0.15 +0.2
4,368,217 + OHPLBJKB_04153 0.15 -1.1
4,368,217 + OHPLBJKB_04153 0.15 +0.1
4,368,218 - OHPLBJKB_04153 0.15 +0.3
4,368,273 + OHPLBJKB_04153 0.18 -0.5
4,368,305 + OHPLBJKB_04153 0.20 +0.3
4,368,305 + OHPLBJKB_04153 0.20 +0.2
4,368,435 + OHPLBJKB_04153 0.28 -1.3
4,368,459 + OHPLBJKB_04153 0.29 -0.7
4,368,459 + OHPLBJKB_04153 0.29 +0.5
4,368,509 + OHPLBJKB_04153 0.32 -1.0
4,368,509 + OHPLBJKB_04153 0.32 -0.6
4,368,509 + OHPLBJKB_04153 0.32 -0.1
4,368,510 - OHPLBJKB_04153 0.32 -0.4
4,368,510 - OHPLBJKB_04153 0.32 +0.0
4,368,536 + OHPLBJKB_04153 0.33 +0.4
4,368,547 + OHPLBJKB_04153 0.34 -0.3
4,368,591 + OHPLBJKB_04153 0.36 -0.2
4,368,592 - OHPLBJKB_04153 0.37 -0.5
4,368,639 + OHPLBJKB_04153 0.39 +0.4
4,368,639 + OHPLBJKB_04153 0.39 +0.4
4,368,640 - OHPLBJKB_04153 0.39 -0.3
4,368,640 - OHPLBJKB_04153 0.39 +0.8
4,368,687 + OHPLBJKB_04153 0.42 +0.4
4,368,687 + OHPLBJKB_04153 0.42 -0.5
4,368,688 - OHPLBJKB_04153 0.42 -0.8
4,368,688 - OHPLBJKB_04153 0.42 -0.5
4,368,688 - OHPLBJKB_04153 0.42 +0.0
4,368,749 - OHPLBJKB_04153 0.45 -0.9
4,368,749 - OHPLBJKB_04153 0.45 -0.5
4,368,790 - OHPLBJKB_04153 0.48 +0.1
4,368,790 - OHPLBJKB_04153 0.48 -0.4
4,368,790 - OHPLBJKB_04153 0.48 -0.2
4,368,792 + OHPLBJKB_04153 0.48 +0.4
4,368,792 + OHPLBJKB_04153 0.48 +0.2
4,368,792 + OHPLBJKB_04153 0.48 -1.1
4,368,895 + OHPLBJKB_04153 0.54 -0.3
4,368,898 + OHPLBJKB_04153 0.54 -0.1
4,368,899 - OHPLBJKB_04153 0.54 +0.7
4,368,903 + OHPLBJKB_04153 0.54 -0.2
4,368,903 + OHPLBJKB_04153 0.54 -0.5
4,369,094 - OHPLBJKB_04153 0.65 -0.8
4,369,094 - OHPLBJKB_04153 0.65 -0.3
4,369,161 - OHPLBJKB_04153 0.69 -1.2
4,369,183 + OHPLBJKB_04153 0.70 -0.5
4,369,318 - OHPLBJKB_04153 0.78 +0.4
4,369,339 + OHPLBJKB_04153 0.79 +0.2
4,369,339 + OHPLBJKB_04153 0.79 -0.7
4,369,381 + OHPLBJKB_04153 0.81 -0.0
4,369,381 + OHPLBJKB_04153 0.81 +0.1
4,369,382 - OHPLBJKB_04153 0.82 -0.3
4,369,605 + -0.7
4,369,610 - +0.6
4,369,614 - -0.1
4,369,626 + -0.0
4,369,626 + -0.2
4,369,626 + -0.3
4,369,627 - -0.6
4,369,627 - -2.1
4,369,627 - -1.3
4,369,627 - -0.5
4,369,681 + -0.7
4,369,682 - +1.0
4,369,682 - +0.1
4,369,682 - -0.3
4,369,689 + +0.5
4,369,689 + -1.0
4,369,740 + -0.1
4,369,741 - +0.3
4,369,767 - +0.2
4,369,769 + +0.7
4,369,769 + -1.9
4,369,769 + -0.3
4,369,770 - -0.2
4,369,770 - +0.9
4,369,771 + +0.9
4,369,771 + -0.4
4,369,771 + +0.8
4,369,771 + -0.6
4,369,771 + +1.1
4,369,771 + -0.3
4,369,771 + -0.2
4,369,771 + +0.4
4,369,771 + -0.6
4,369,772 - -0.1
4,369,772 - -0.5
4,369,772 - +0.4
4,369,772 - -0.5
4,369,772 - -0.0
4,369,793 - +0.3
4,369,801 - -0.7
4,370,102 - OHPLBJKB_04154 0.33 +0.4
4,370,276 + OHPLBJKB_04154 0.49 -0.1
4,370,296 + OHPLBJKB_04154 0.51 -1.2
4,370,318 + OHPLBJKB_04154 0.53 +0.1
4,370,345 + OHPLBJKB_04154 0.56 -0.1
4,370,346 - OHPLBJKB_04154 0.56 -0.4
4,370,346 - OHPLBJKB_04154 0.56 -0.2
4,370,347 + OHPLBJKB_04154 0.56 -0.6
4,370,347 + OHPLBJKB_04154 0.56 -0.4
4,370,347 + OHPLBJKB_04154 0.56 -1.0
4,370,348 - OHPLBJKB_04154 0.56 -0.2
4,370,348 - OHPLBJKB_04154 0.56 +0.1
4,370,348 - OHPLBJKB_04154 0.56 +1.1
4,370,449 + OHPLBJKB_04154 0.66 +0.1
4,370,450 - OHPLBJKB_04154 0.66 +0.4
4,370,465 + OHPLBJKB_04154 0.67 -0.4
4,370,480 + OHPLBJKB_04154 0.69 +0.3
4,370,547 + OHPLBJKB_04154 0.75 -0.1
4,370,557 + OHPLBJKB_04154 0.76 -0.4
4,370,567 + OHPLBJKB_04154 0.77 +0.2
4,370,569 + OHPLBJKB_04154 0.77 +0.7
4,370,570 - OHPLBJKB_04154 0.77 -0.6
4,370,570 - OHPLBJKB_04154 0.77 +0.1
4,370,570 - OHPLBJKB_04154 0.77 +1.1
4,370,636 + OHPLBJKB_04154 0.83 -0.3
4,370,637 - OHPLBJKB_04154 0.84 +1.3
4,370,637 - OHPLBJKB_04154 0.84 -0.0
4,370,637 - OHPLBJKB_04154 0.84 -2.1
4,370,666 + OHPLBJKB_04154 0.86 -0.8
4,370,667 - OHPLBJKB_04154 0.86 -0.1

Or see this region's nucleotide sequence