Experiment: lib only
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_04148 and OHPLBJKB_04149 are separated by 9 nucleotides OHPLBJKB_04149 and OHPLBJKB_04150 are separated by 300 nucleotides OHPLBJKB_04150 and OHPLBJKB_04151 are separated by 10 nucleotides
OHPLBJKB_04148: OHPLBJKB_04148 - Rhamnulose-1-phosphate aldolase, at 4,363,534 to 4,364,358
_04148
OHPLBJKB_04149: OHPLBJKB_04149 - L-rhamnose mutarotase, at 4,364,368 to 4,364,682
_04149
OHPLBJKB_04150: OHPLBJKB_04150 - PTS system fructose-specific EIIABC component, at 4,364,983 to 4,365,429
_04150
OHPLBJKB_04151: OHPLBJKB_04151 - PTS system mannose-specific EIIBCA component, at 4,365,440 to 4,366,891
_04151
Position (kb) 4364
4365 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4363.409 kb on + strand at 4363.409 kb on + strand at 4363.409 kb on + strand at 4363.410 kb on - strand at 4363.410 kb on - strand at 4363.416 kb on - strand at 4363.416 kb on - strand at 4363.425 kb on - strand at 4363.425 kb on - strand at 4363.519 kb on - strand at 4363.698 kb on + strand, within OHPLBJKB_04148 at 4363.744 kb on - strand, within OHPLBJKB_04148 at 4363.802 kb on + strand, within OHPLBJKB_04148 at 4363.802 kb on + strand, within OHPLBJKB_04148 at 4363.803 kb on - strand, within OHPLBJKB_04148 at 4363.812 kb on - strand, within OHPLBJKB_04148 at 4363.987 kb on + strand, within OHPLBJKB_04148 at 4363.987 kb on + strand, within OHPLBJKB_04148 at 4363.987 kb on + strand, within OHPLBJKB_04148 at 4363.987 kb on + strand, within OHPLBJKB_04148 at 4363.987 kb on + strand, within OHPLBJKB_04148 at 4363.987 kb on + strand, within OHPLBJKB_04148 at 4363.987 kb on + strand, within OHPLBJKB_04148 at 4363.987 kb on + strand, within OHPLBJKB_04148 at 4363.987 kb on + strand, within OHPLBJKB_04148 at 4363.987 kb on + strand, within OHPLBJKB_04148 at 4363.987 kb on + strand, within OHPLBJKB_04148 at 4363.987 kb on + strand, within OHPLBJKB_04148 at 4363.987 kb on + strand, within OHPLBJKB_04148 at 4363.987 kb on + strand, within OHPLBJKB_04148 at 4363.988 kb on - strand, within OHPLBJKB_04148 at 4363.988 kb on - strand, within OHPLBJKB_04148 at 4363.988 kb on - strand, within OHPLBJKB_04148 at 4363.988 kb on - strand, within OHPLBJKB_04148 at 4363.988 kb on - strand, within OHPLBJKB_04148 at 4363.988 kb on - strand, within OHPLBJKB_04148 at 4363.988 kb on - strand, within OHPLBJKB_04148 at 4363.988 kb on - strand, within OHPLBJKB_04148 at 4363.991 kb on + strand, within OHPLBJKB_04148 at 4363.991 kb on + strand, within OHPLBJKB_04148 at 4363.992 kb on - strand, within OHPLBJKB_04148 at 4363.992 kb on - strand, within OHPLBJKB_04148 at 4363.992 kb on - strand, within OHPLBJKB_04148 at 4363.992 kb on - strand, within OHPLBJKB_04148 at 4364.057 kb on + strand, within OHPLBJKB_04148 at 4364.243 kb on + strand, within OHPLBJKB_04148 at 4364.243 kb on + strand, within OHPLBJKB_04148 at 4364.244 kb on - strand, within OHPLBJKB_04148 at 4364.244 kb on - strand, within OHPLBJKB_04148 at 4364.244 kb on - strand, within OHPLBJKB_04148 at 4364.244 kb on - strand, within OHPLBJKB_04148 at 4364.244 kb on - strand, within OHPLBJKB_04148 at 4364.356 kb on + strand at 4364.420 kb on - strand, within OHPLBJKB_04149 at 4364.420 kb on - strand, within OHPLBJKB_04149 at 4364.484 kb on + strand, within OHPLBJKB_04149 at 4364.484 kb on + strand, within OHPLBJKB_04149 at 4364.485 kb on - strand, within OHPLBJKB_04149 at 4364.485 kb on - strand, within OHPLBJKB_04149 at 4364.488 kb on + strand, within OHPLBJKB_04149 at 4364.488 kb on + strand, within OHPLBJKB_04149 at 4364.489 kb on - strand, within OHPLBJKB_04149 at 4364.497 kb on + strand, within OHPLBJKB_04149 at 4364.497 kb on + strand, within OHPLBJKB_04149 at 4364.602 kb on + strand, within OHPLBJKB_04149 at 4364.602 kb on + strand, within OHPLBJKB_04149 at 4364.602 kb on + strand, within OHPLBJKB_04149 at 4364.603 kb on - strand, within OHPLBJKB_04149 at 4364.603 kb on - strand, within OHPLBJKB_04149 at 4364.603 kb on - strand, within OHPLBJKB_04149 at 4364.603 kb on - strand, within OHPLBJKB_04149 at 4364.603 kb on - strand, within OHPLBJKB_04149 at 4364.604 kb on + strand, within OHPLBJKB_04149 at 4364.604 kb on + strand, within OHPLBJKB_04149 at 4364.605 kb on - strand, within OHPLBJKB_04149 at 4364.747 kb on + strand at 4364.748 kb on - strand at 4364.770 kb on - strand at 4364.792 kb on - strand at 4364.836 kb on + strand at 4364.836 kb on + strand at 4364.841 kb on - strand at 4364.851 kb on + strand at 4364.914 kb on + strand at 4364.995 kb on - strand at 4365.085 kb on - strand, within OHPLBJKB_04150 at 4365.206 kb on + strand, within OHPLBJKB_04150 at 4365.232 kb on - strand, within OHPLBJKB_04150 at 4365.407 kb on + strand at 4365.408 kb on - strand at 4365.408 kb on - strand at 4365.408 kb on - strand at 4365.453 kb on + strand at 4365.454 kb on - strand at 4365.454 kb on - strand at 4365.457 kb on + strand at 4365.457 kb on + strand at 4365.457 kb on + strand at 4365.457 kb on + strand at 4365.458 kb on - strand at 4365.458 kb on - strand at 4365.458 kb on - strand at 4365.458 kb on - strand at 4365.458 kb on - strand at 4365.458 kb on - strand at 4365.458 kb on - strand at 4365.458 kb on - strand at 4365.458 kb on - strand at 4365.458 kb on - strand at 4365.500 kb on + strand at 4365.500 kb on + strand at 4365.500 kb on + strand at 4365.501 kb on - strand at 4365.501 kb on - strand at 4365.501 kb on - strand at 4365.501 kb on - strand at 4365.501 kb on - strand at 4365.501 kb on - strand at 4365.501 kb on - strand at 4365.501 kb on - strand at 4365.501 kb on - strand at 4365.501 kb on - strand at 4365.547 kb on + strand at 4365.552 kb on + strand at 4365.552 kb on + strand at 4365.552 kb on + strand at 4365.552 kb on + strand at 4365.623 kb on + strand, within OHPLBJKB_04151 at 4365.623 kb on + strand, within OHPLBJKB_04151
Per-strain Table
Position Strand Gene LocusTag Fraction lib only remove 4,363,409 + +1.0 4,363,409 + -0.0 4,363,409 + -0.5 4,363,410 - +0.4 4,363,410 - +0.3 4,363,416 - -0.3 4,363,416 - +0.6 4,363,425 - -2.0 4,363,425 - -2.2 4,363,519 - -0.1 4,363,698 + OHPLBJKB_04148 0.20 -1.3 4,363,744 - OHPLBJKB_04148 0.25 +0.6 4,363,802 + OHPLBJKB_04148 0.32 -0.8 4,363,802 + OHPLBJKB_04148 0.32 -0.5 4,363,803 - OHPLBJKB_04148 0.33 +0.5 4,363,812 - OHPLBJKB_04148 0.34 -0.7 4,363,987 + OHPLBJKB_04148 0.55 -0.3 4,363,987 + OHPLBJKB_04148 0.55 -0.6 4,363,987 + OHPLBJKB_04148 0.55 -0.1 4,363,987 + OHPLBJKB_04148 0.55 -0.2 4,363,987 + OHPLBJKB_04148 0.55 -0.5 4,363,987 + OHPLBJKB_04148 0.55 -0.0 4,363,987 + OHPLBJKB_04148 0.55 -0.0 4,363,987 + OHPLBJKB_04148 0.55 -0.1 4,363,987 + OHPLBJKB_04148 0.55 +0.4 4,363,987 + OHPLBJKB_04148 0.55 +0.8 4,363,987 + OHPLBJKB_04148 0.55 -0.7 4,363,987 + OHPLBJKB_04148 0.55 +0.1 4,363,987 + OHPLBJKB_04148 0.55 -0.4 4,363,987 + OHPLBJKB_04148 0.55 -0.6 4,363,988 - OHPLBJKB_04148 0.55 +0.1 4,363,988 - OHPLBJKB_04148 0.55 -1.5 4,363,988 - OHPLBJKB_04148 0.55 +0.5 4,363,988 - OHPLBJKB_04148 0.55 -0.7 4,363,988 - OHPLBJKB_04148 0.55 +0.4 4,363,988 - OHPLBJKB_04148 0.55 +2.5 4,363,988 - OHPLBJKB_04148 0.55 -0.1 4,363,988 - OHPLBJKB_04148 0.55 -0.3 4,363,991 + OHPLBJKB_04148 0.55 +0.1 4,363,991 + OHPLBJKB_04148 0.55 -0.2 4,363,992 - OHPLBJKB_04148 0.56 -0.6 4,363,992 - OHPLBJKB_04148 0.56 +0.6 4,363,992 - OHPLBJKB_04148 0.56 +0.6 4,363,992 - OHPLBJKB_04148 0.56 +0.9 4,364,057 + OHPLBJKB_04148 0.63 -1.4 4,364,243 + OHPLBJKB_04148 0.86 -0.2 4,364,243 + OHPLBJKB_04148 0.86 +0.2 4,364,244 - OHPLBJKB_04148 0.86 +0.5 4,364,244 - OHPLBJKB_04148 0.86 +0.6 4,364,244 - OHPLBJKB_04148 0.86 -0.9 4,364,244 - OHPLBJKB_04148 0.86 +0.1 4,364,244 - OHPLBJKB_04148 0.86 -0.2 4,364,356 + +0.6 4,364,420 - OHPLBJKB_04149 0.17 -0.8 4,364,420 - OHPLBJKB_04149 0.17 +0.0 4,364,484 + OHPLBJKB_04149 0.37 +0.1 4,364,484 + OHPLBJKB_04149 0.37 -1.0 4,364,485 - OHPLBJKB_04149 0.37 +0.4 4,364,485 - OHPLBJKB_04149 0.37 -1.5 4,364,488 + OHPLBJKB_04149 0.38 +0.0 4,364,488 + OHPLBJKB_04149 0.38 -0.6 4,364,489 - OHPLBJKB_04149 0.38 +0.4 4,364,497 + OHPLBJKB_04149 0.41 +0.0 4,364,497 + OHPLBJKB_04149 0.41 +0.6 4,364,602 + OHPLBJKB_04149 0.74 +0.2 4,364,602 + OHPLBJKB_04149 0.74 +0.5 4,364,602 + OHPLBJKB_04149 0.74 -0.4 4,364,603 - OHPLBJKB_04149 0.75 -1.5 4,364,603 - OHPLBJKB_04149 0.75 +0.6 4,364,603 - OHPLBJKB_04149 0.75 +0.1 4,364,603 - OHPLBJKB_04149 0.75 -0.5 4,364,603 - OHPLBJKB_04149 0.75 +0.1 4,364,604 + OHPLBJKB_04149 0.75 -1.9 4,364,604 + OHPLBJKB_04149 0.75 -0.1 4,364,605 - OHPLBJKB_04149 0.75 -0.1 4,364,747 + -0.1 4,364,748 - +0.9 4,364,770 - +0.9 4,364,792 - +0.5 4,364,836 + -0.6 4,364,836 + -0.4 4,364,841 - -0.5 4,364,851 + -0.4 4,364,914 + +0.3 4,364,995 - -1.4 4,365,085 - OHPLBJKB_04150 0.23 -0.1 4,365,206 + OHPLBJKB_04150 0.50 +0.5 4,365,232 - OHPLBJKB_04150 0.56 +0.4 4,365,407 + +0.0 4,365,408 - -0.3 4,365,408 - -0.3 4,365,408 - -0.8 4,365,453 + -0.8 4,365,454 - -0.5 4,365,454 - +0.6 4,365,457 + -0.4 4,365,457 + -0.1 4,365,457 + -0.3 4,365,457 + +1.1 4,365,458 - -0.1 4,365,458 - -0.6 4,365,458 - +0.7 4,365,458 - -0.5 4,365,458 - +0.1 4,365,458 - -1.0 4,365,458 - +1.0 4,365,458 - +0.4 4,365,458 - -1.0 4,365,458 - -0.1 4,365,500 + +0.0 4,365,500 + -1.0 4,365,500 + +0.3 4,365,501 - +0.3 4,365,501 - -0.9 4,365,501 - -0.5 4,365,501 - -1.0 4,365,501 - -1.3 4,365,501 - -0.4 4,365,501 - -0.2 4,365,501 - +0.9 4,365,501 - -0.5 4,365,501 - -0.3 4,365,547 + +0.5 4,365,552 + -0.3 4,365,552 + -1.3 4,365,552 + -0.5 4,365,552 + -0.8 4,365,623 + OHPLBJKB_04151 0.13 +0.4 4,365,623 + OHPLBJKB_04151 0.13 -0.6
Or see this region's nucleotide sequence