Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_03890

Experiment: lib only

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	lib only
4,080,763	-		OHPLBJKB_03887	0.78	+0.6
4,080,791	+		OHPLBJKB_03887	0.82	+0.7
4,080,801	+		OHPLBJKB_03887	0.84	-0.3
4,080,801	+		OHPLBJKB_03887	0.84	+0.0
4,080,802	-		OHPLBJKB_03887	0.84	+0.4
4,080,947	-				-0.8
4,080,953	+				-0.2
4,080,953	+				+0.5
4,080,953	+				+0.4
4,080,953	+				+0.0
4,080,953	+				-0.6
4,080,953	+				-0.5
4,080,954	-				+0.9
4,080,954	-				+0.3
4,080,954	-				+1.1
4,080,954	-				+0.5
4,080,958	-				+0.6
4,080,958	-				+1.0
4,081,007	+		OHPLBJKB_03888	0.19	-0.3
4,081,007	+		OHPLBJKB_03888	0.19	-1.7
4,081,007	+		OHPLBJKB_03888	0.19	+0.6
4,081,008	-		OHPLBJKB_03888	0.19	-1.1
4,081,008	-		OHPLBJKB_03888	0.19	+0.3
4,081,008	-		OHPLBJKB_03888	0.19	+0.2
4,081,227	+		OHPLBJKB_03888	0.74	+0.6
4,081,227	+		OHPLBJKB_03888	0.74	-0.8
4,081,227	+		OHPLBJKB_03888	0.74	-0.2
4,081,259	-		OHPLBJKB_03888	0.83	-0.1
4,081,300	-				-0.1
4,081,300	-				+1.5
4,081,300	-				+0.5
4,081,300	-				-0.2
4,081,319	+				-1.1
4,081,326	-				-0.5
4,081,404	-		OHPLBJKB_03889	0.18	+0.6
4,081,404	-		OHPLBJKB_03889	0.18	+0.9
4,081,404	-		OHPLBJKB_03889	0.18	+0.0
4,081,419	-		OHPLBJKB_03889	0.23	-0.7
4,081,419	-		OHPLBJKB_03889	0.23	+0.6
4,081,448	+		OHPLBJKB_03889	0.31	-1.3
4,081,449	-		OHPLBJKB_03889	0.31	-0.7
4,081,491	+		OHPLBJKB_03889	0.42	+1.3
4,081,577	-		OHPLBJKB_03889	0.66	-0.0
4,081,641	+		OHPLBJKB_03889	0.84	+0.6
4,081,695	+				+0.2
4,081,695	+				-0.2
4,081,700	+				+0.1
4,081,700	+				-0.1
4,081,711	+				-1.7
4,081,712	-				-1.0
4,081,712	-				-0.7
4,081,759	+				-0.2
4,081,759	+				-0.3
4,081,759	+				-0.8
4,081,759	+				-0.4
4,081,759	+				+0.3
4,081,759	+				-0.4
4,081,759	+				-0.9
4,081,760	-				-0.4
4,081,760	-				-0.3
4,081,760	-				-0.4
4,081,788	+				-0.1
4,081,838	-				-0.2
4,081,856	-				-0.3
4,081,856	-				+0.1
4,081,866	+				+0.3
4,081,866	+				-0.1
4,081,866	+				-0.2
4,081,866	+				+0.6
4,081,867	-				-0.2
4,081,867	-				+0.3
4,081,867	-				+0.1
4,081,867	-				+0.2
4,081,867	-				-0.1
4,081,925	+		OHPLBJKB_03890	0.15	-0.1
4,081,925	+		OHPLBJKB_03890	0.15	+0.3
4,081,925	+		OHPLBJKB_03890	0.15	-0.1
4,081,926	-		OHPLBJKB_03890	0.15	+0.5
4,081,926	-		OHPLBJKB_03890	0.15	-0.0
4,081,940	+		OHPLBJKB_03890	0.16	-1.3
4,081,992	+		OHPLBJKB_03890	0.20	+0.9
4,081,992	+		OHPLBJKB_03890	0.20	+0.1
4,081,993	-		OHPLBJKB_03890	0.21	+0.5
4,082,014	+		OHPLBJKB_03890	0.22	-0.3
4,082,062	-		OHPLBJKB_03890	0.27	-1.6
4,082,082	-		OHPLBJKB_03890	0.28	-0.2
4,082,124	+		OHPLBJKB_03890	0.32	-1.1
4,082,124	+		OHPLBJKB_03890	0.32	+0.1
4,082,124	+		OHPLBJKB_03890	0.32	-1.3
4,082,124	+		OHPLBJKB_03890	0.32	+0.6
4,082,124	+		OHPLBJKB_03890	0.32	+0.3
4,082,125	-		OHPLBJKB_03890	0.32	+1.3
4,082,125	-		OHPLBJKB_03890	0.32	-0.4
4,082,125	-		OHPLBJKB_03890	0.32	+0.1
4,082,125	-		OHPLBJKB_03890	0.32	+1.1
4,082,125	-		OHPLBJKB_03890	0.32	-0.8
4,082,127	+		OHPLBJKB_03890	0.32	+0.9
4,082,127	+		OHPLBJKB_03890	0.32	+0.0
4,082,127	+		OHPLBJKB_03890	0.32	-1.3
4,082,127	+		OHPLBJKB_03890	0.32	-1.8
4,082,127	+		OHPLBJKB_03890	0.32	-0.2
4,082,127	+		OHPLBJKB_03890	0.32	+1.6
4,082,127	+		OHPLBJKB_03890	0.32	-1.1
4,082,127	+		OHPLBJKB_03890	0.32	+0.7
4,082,127	+		OHPLBJKB_03890	0.32	+0.3
4,082,127	+		OHPLBJKB_03890	0.32	+0.3
4,082,127	+		OHPLBJKB_03890	0.32	+0.1
4,082,127	+		OHPLBJKB_03890	0.32	-0.2
4,082,128	-		OHPLBJKB_03890	0.32	-0.4
4,082,128	-		OHPLBJKB_03890	0.32	+0.0
4,082,128	-		OHPLBJKB_03890	0.32	-1.6
4,082,128	-		OHPLBJKB_03890	0.32	-0.2
4,082,128	-		OHPLBJKB_03890	0.32	+0.4
4,082,128	-		OHPLBJKB_03890	0.32	-0.5
4,082,141	+		OHPLBJKB_03890	0.34	+0.6
4,082,141	+		OHPLBJKB_03890	0.34	+0.0
4,082,256	-		OHPLBJKB_03890	0.44	+0.5
4,082,365	+		OHPLBJKB_03890	0.53	-0.7
4,082,365	+		OHPLBJKB_03890	0.53	-0.8
4,082,365	+		OHPLBJKB_03890	0.53	+0.4
4,082,366	-		OHPLBJKB_03890	0.53	-0.7
4,082,366	-		OHPLBJKB_03890	0.53	-0.5
4,082,374	+		OHPLBJKB_03890	0.54	+0.0
4,082,379	+		OHPLBJKB_03890	0.55	-0.3
4,082,379	+		OHPLBJKB_03890	0.55	+1.3
4,082,380	-		OHPLBJKB_03890	0.55	-0.3
4,082,402	+		OHPLBJKB_03890	0.57	+0.3
4,082,403	-		OHPLBJKB_03890	0.57	-0.7
4,082,403	-		OHPLBJKB_03890	0.57	+0.1
4,082,468	+		OHPLBJKB_03890	0.62	+0.4
4,082,469	-		OHPLBJKB_03890	0.63	+0.6
4,082,519	-		OHPLBJKB_03890	0.67	+0.6
4,082,600	-		OHPLBJKB_03890	0.74	-0.3
4,082,600	-		OHPLBJKB_03890	0.74	-0.0
4,082,600	-		OHPLBJKB_03890	0.74	-1.5
4,082,603	+		OHPLBJKB_03890	0.74	-0.4
4,082,603	+		OHPLBJKB_03890	0.74	+0.3
4,082,604	-		OHPLBJKB_03890	0.74	-0.5
4,082,604	-		OHPLBJKB_03890	0.74	+0.9
4,082,604	-		OHPLBJKB_03890	0.74	-0.6
4,082,604	-		OHPLBJKB_03890	0.74	+0.6
4,082,604	-		OHPLBJKB_03890	0.74	-0.5
4,082,604	-		OHPLBJKB_03890	0.74	-0.5
4,082,730	+		OHPLBJKB_03890	0.86	-0.2
4,082,731	-		OHPLBJKB_03890	0.86	+0.3
4,082,731	-		OHPLBJKB_03890	0.86	+1.1
4,082,745	+		OHPLBJKB_03890	0.87	+0.2
4,082,749	+		OHPLBJKB_03890	0.87	+0.4
4,082,749	+		OHPLBJKB_03890	0.87	-1.0
4,082,750	-		OHPLBJKB_03890	0.87	-0.9
4,082,750	-		OHPLBJKB_03890	0.87	+0.2
4,082,750	-		OHPLBJKB_03890	0.87	-0.0
4,082,750	-		OHPLBJKB_03890	0.87	+0.5
4,082,777	-		OHPLBJKB_03890	0.90	-0.8
4,082,780	+				+0.5
4,082,780	+				-1.7
4,082,780	+				+1.1
4,082,780	+				+0.4
4,082,780	+				+0.0
4,082,780	+				-0.1
4,082,780	+				-0.6
4,082,780	+				+0.0
4,082,781	-				+0.4
4,082,781	-				-0.8
4,082,781	-				-1.3
4,082,781	-				+0.3
4,082,781	-				+0.2
4,082,813	-				-0.3
4,082,814	+				-2.1
4,082,814	+				+0.3
4,082,814	+				+0.9
4,082,814	+				-1.7
4,082,814	+				-0.3
4,082,837	+				-0.9
4,082,887	-				-1.3
4,082,981	+				-0.6
4,082,982	-				-0.4
4,083,078	-		OHPLBJKB_03891	0.18	+0.4
4,083,078	-		OHPLBJKB_03891	0.18	+1.1
4,083,111	+		OHPLBJKB_03891	0.24	+0.6
4,083,171	+		OHPLBJKB_03891	0.35	-0.3
4,083,171	+		OHPLBJKB_03891	0.35	-0.1
4,083,171	+		OHPLBJKB_03891	0.35	+0.7
4,083,171	+		OHPLBJKB_03891	0.35	+0.5
4,083,171	+		OHPLBJKB_03891	0.35	+0.9
4,083,171	+		OHPLBJKB_03891	0.35	+0.6
4,083,172	-		OHPLBJKB_03891	0.36	+1.0
4,083,172	-		OHPLBJKB_03891	0.36	-0.2
4,083,173	-		OHPLBJKB_03891	0.36	+0.4
4,083,209	+		OHPLBJKB_03891	0.43	-0.1
4,083,216	+		OHPLBJKB_03891	0.44	-0.9
4,083,216	+		OHPLBJKB_03891	0.44	-1.1
4,083,217	-		OHPLBJKB_03891	0.44	+1.1
4,083,217	-		OHPLBJKB_03891	0.44	+0.4
4,083,217	-		OHPLBJKB_03891	0.44	-0.1
4,083,261	+		OHPLBJKB_03891	0.52	-0.2
4,083,261	+		OHPLBJKB_03891	0.52	-0.9
4,083,262	-		OHPLBJKB_03891	0.52	-0.3
4,083,262	-		OHPLBJKB_03891	0.52	-0.0
4,083,262	-		OHPLBJKB_03891	0.52	+0.2
4,083,318	+		OHPLBJKB_03891	0.63	+0.7
4,083,319	-		OHPLBJKB_03891	0.63	+0.2
4,083,328	-		OHPLBJKB_03891	0.65	+1.1
4,083,330	-		OHPLBJKB_03891	0.65	-0.4
4,083,330	-		OHPLBJKB_03891	0.65	+0.1
4,083,335	+		OHPLBJKB_03891	0.66	-0.5
4,083,354	+		OHPLBJKB_03891	0.70	-0.4
4,083,401	-		OHPLBJKB_03891	0.78	-0.3
4,083,488	+				+0.3
4,083,489	-				-0.6
4,083,513	+				-0.6
4,083,548	+		OHPLBJKB_03892	0.11	+0.7
4,083,654	+		OHPLBJKB_03892	0.45	+0.1
4,083,695	+		OHPLBJKB_03892	0.58	+0.1
4,083,711	-		OHPLBJKB_03892	0.63	+0.8
4,083,728	-		OHPLBJKB_03892	0.68	-2.0
4,083,728	-		OHPLBJKB_03892	0.68	-1.0
4,083,730	+		OHPLBJKB_03892	0.69	-0.7
4,083,730	+		OHPLBJKB_03892	0.69	-0.9
4,083,764	-		OHPLBJKB_03892	0.79	+0.2
4,083,765	+		OHPLBJKB_03892	0.80	-0.8
4,083,765	+		OHPLBJKB_03892	0.80	+0.4
4,083,766	-		OHPLBJKB_03892	0.80	-0.6
4,083,766	-		OHPLBJKB_03892	0.80	-0.3
4,083,766	-		OHPLBJKB_03892	0.80	-0.9
4,083,766	-		OHPLBJKB_03892	0.80	+0.5
4,083,766	-		OHPLBJKB_03892	0.80	-0.4
4,083,808	+				-0.1
4,083,808	+				+0.3
4,083,812	+				-0.1
4,083,812	+				+0.7
4,083,812	+				-0.3
4,083,812	+				-0.2
4,083,812	+				-1.4
4,083,813	-				-1.1
4,083,813	-				-0.4
4,083,813	-				+0.0
4,083,817	+				+1.0
4,083,818	-				+0.1
4,083,830	-				-0.9