Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_02776

Experiment: lib only

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOHPLBJKB_02775 and OHPLBJKB_02776 are separated by 90 nucleotidesOHPLBJKB_02776 and OHPLBJKB_02777 are separated by 10 nucleotidesOHPLBJKB_02777 and OHPLBJKB_02778 are separated by 154 nucleotides OHPLBJKB_02775: OHPLBJKB_02775 - Serine--tRNA ligase, at 2,901,575 to 2,902,867 _02775 OHPLBJKB_02776: OHPLBJKB_02776 - Replication-associated recombination protein A, at 2,902,958 to 2,904,301 _02776 OHPLBJKB_02777: OHPLBJKB_02777 - Outer-membrane lipoprotein carrier protein, at 2,904,312 to 2,904,923 _02777 OHPLBJKB_02778: OHPLBJKB_02778 - DNA translocase FtsK, at 2,905,078 to 2,909,067 _02778 Position (kb) 2902 2903 2904 2905Strain fitness (log2 ratio) -2 -1 0 1at 2902.929 kb on - strandat 2902.982 kb on - strandat 2903.055 kb on + strandat 2903.072 kb on + strandat 2903.089 kb on - strandat 2903.089 kb on - strandat 2903.106 kb on + strand, within OHPLBJKB_02776at 2903.106 kb on + strand, within OHPLBJKB_02776at 2903.165 kb on + strand, within OHPLBJKB_02776at 2903.253 kb on + strand, within OHPLBJKB_02776at 2903.254 kb on - strand, within OHPLBJKB_02776at 2903.254 kb on - strand, within OHPLBJKB_02776at 2903.254 kb on - strand, within OHPLBJKB_02776at 2903.433 kb on + strand, within OHPLBJKB_02776at 2903.435 kb on + strand, within OHPLBJKB_02776at 2903.435 kb on + strand, within OHPLBJKB_02776at 2903.476 kb on - strand, within OHPLBJKB_02776at 2903.512 kb on + strand, within OHPLBJKB_02776at 2903.513 kb on - strand, within OHPLBJKB_02776at 2903.569 kb on + strand, within OHPLBJKB_02776at 2903.594 kb on + strand, within OHPLBJKB_02776at 2903.595 kb on - strand, within OHPLBJKB_02776at 2903.624 kb on - strand, within OHPLBJKB_02776at 2903.666 kb on + strand, within OHPLBJKB_02776at 2903.734 kb on + strand, within OHPLBJKB_02776at 2903.749 kb on - strand, within OHPLBJKB_02776at 2903.780 kb on + strand, within OHPLBJKB_02776at 2903.780 kb on + strand, within OHPLBJKB_02776at 2903.781 kb on - strand, within OHPLBJKB_02776at 2903.781 kb on - strand, within OHPLBJKB_02776at 2903.784 kb on - strand, within OHPLBJKB_02776at 2903.784 kb on - strand, within OHPLBJKB_02776at 2903.804 kb on - strand, within OHPLBJKB_02776at 2903.823 kb on + strand, within OHPLBJKB_02776at 2903.914 kb on + strand, within OHPLBJKB_02776at 2903.914 kb on + strand, within OHPLBJKB_02776at 2903.914 kb on + strand, within OHPLBJKB_02776at 2903.915 kb on - strand, within OHPLBJKB_02776at 2903.915 kb on - strand, within OHPLBJKB_02776at 2903.915 kb on - strand, within OHPLBJKB_02776at 2904.061 kb on + strand, within OHPLBJKB_02776at 2904.061 kb on + strand, within OHPLBJKB_02776at 2904.062 kb on - strand, within OHPLBJKB_02776at 2904.145 kb on + strand, within OHPLBJKB_02776at 2904.145 kb on + strand, within OHPLBJKB_02776at 2904.146 kb on - strand, within OHPLBJKB_02776at 2904.146 kb on - strand, within OHPLBJKB_02776at 2904.146 kb on - strand, within OHPLBJKB_02776at 2904.152 kb on + strand, within OHPLBJKB_02776at 2904.152 kb on + strand, within OHPLBJKB_02776at 2904.153 kb on - strand, within OHPLBJKB_02776at 2904.219 kb on + strandat 2904.219 kb on + strandat 2904.219 kb on + strandat 2904.219 kb on + strandat 2904.219 kb on + strandat 2904.219 kb on + strandat 2904.219 kb on + strandat 2904.219 kb on + strandat 2904.220 kb on - strandat 2904.220 kb on - strandat 2904.220 kb on - strandat 2904.220 kb on - strandat 2904.220 kb on - strandat 2904.220 kb on - strandat 2904.220 kb on - strandat 2904.314 kb on - strandat 2904.314 kb on - strandat 2904.317 kb on + strandat 2904.317 kb on + strandat 2904.317 kb on + strandat 2904.317 kb on + strandat 2904.318 kb on - strandat 2904.318 kb on - strandat 2904.318 kb on - strandat 2904.318 kb on - strandat 2904.940 kb on - strandat 2904.988 kb on - strandat 2905.013 kb on - strandat 2905.030 kb on + strandat 2905.030 kb on + strandat 2905.030 kb on + strandat 2905.030 kb on + strandat 2905.031 kb on - strandat 2905.075 kb on + strandat 2905.075 kb on + strandat 2905.076 kb on - strandat 2905.076 kb on - strandat 2905.080 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction lib only
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2,902,929 - -0.7
2,902,982 - +0.7
2,903,055 + -0.4
2,903,072 + -0.6
2,903,089 - -0.9
2,903,089 - -0.1
2,903,106 + OHPLBJKB_02776 0.11 -0.4
2,903,106 + OHPLBJKB_02776 0.11 -0.5
2,903,165 + OHPLBJKB_02776 0.15 -0.5
2,903,253 + OHPLBJKB_02776 0.22 -0.5
2,903,254 - OHPLBJKB_02776 0.22 -1.4
2,903,254 - OHPLBJKB_02776 0.22 -0.3
2,903,254 - OHPLBJKB_02776 0.22 +0.1
2,903,433 + OHPLBJKB_02776 0.35 -0.3
2,903,435 + OHPLBJKB_02776 0.35 +0.6
2,903,435 + OHPLBJKB_02776 0.35 -0.2
2,903,476 - OHPLBJKB_02776 0.39 +0.3
2,903,512 + OHPLBJKB_02776 0.41 -0.5
2,903,513 - OHPLBJKB_02776 0.41 -1.4
2,903,569 + OHPLBJKB_02776 0.45 -0.2
2,903,594 + OHPLBJKB_02776 0.47 -1.2
2,903,595 - OHPLBJKB_02776 0.47 +0.6
2,903,624 - OHPLBJKB_02776 0.50 -0.1
2,903,666 + OHPLBJKB_02776 0.53 +0.5
2,903,734 + OHPLBJKB_02776 0.58 -0.1
2,903,749 - OHPLBJKB_02776 0.59 +0.5
2,903,780 + OHPLBJKB_02776 0.61 +1.2
2,903,780 + OHPLBJKB_02776 0.61 +0.5
2,903,781 - OHPLBJKB_02776 0.61 -0.8
2,903,781 - OHPLBJKB_02776 0.61 -0.1
2,903,784 - OHPLBJKB_02776 0.61 -1.2
2,903,784 - OHPLBJKB_02776 0.61 +0.4
2,903,804 - OHPLBJKB_02776 0.63 -0.3
2,903,823 + OHPLBJKB_02776 0.64 -0.0
2,903,914 + OHPLBJKB_02776 0.71 -1.6
2,903,914 + OHPLBJKB_02776 0.71 -0.0
2,903,914 + OHPLBJKB_02776 0.71 -0.2
2,903,915 - OHPLBJKB_02776 0.71 -0.4
2,903,915 - OHPLBJKB_02776 0.71 +1.3
2,903,915 - OHPLBJKB_02776 0.71 -0.3
2,904,061 + OHPLBJKB_02776 0.82 +1.0
2,904,061 + OHPLBJKB_02776 0.82 -0.5
2,904,062 - OHPLBJKB_02776 0.82 -1.0
2,904,145 + OHPLBJKB_02776 0.88 -0.5
2,904,145 + OHPLBJKB_02776 0.88 -0.1
2,904,146 - OHPLBJKB_02776 0.88 +0.6
2,904,146 - OHPLBJKB_02776 0.88 -0.0
2,904,146 - OHPLBJKB_02776 0.88 -0.1
2,904,152 + OHPLBJKB_02776 0.89 -0.6
2,904,152 + OHPLBJKB_02776 0.89 -1.8
2,904,153 - OHPLBJKB_02776 0.89 -0.6
2,904,219 + -0.2
2,904,219 + -0.5
2,904,219 + -1.4
2,904,219 + +1.2
2,904,219 + -1.7
2,904,219 + -0.4
2,904,219 + -0.5
2,904,219 + -0.9
2,904,220 - -0.1
2,904,220 - +0.3
2,904,220 - +0.6
2,904,220 - +0.5
2,904,220 - -0.4
2,904,220 - -0.2
2,904,220 - -2.5
2,904,314 - -1.3
2,904,314 - +0.6
2,904,317 + -1.5
2,904,317 + -0.4
2,904,317 + -0.8
2,904,317 + +0.8
2,904,318 - +0.4
2,904,318 - +0.7
2,904,318 - +0.4
2,904,318 - -0.4
2,904,940 - -0.2
2,904,988 - -0.4
2,905,013 - +0.0
2,905,030 + -0.2
2,905,030 + +0.1
2,905,030 + -0.2
2,905,030 + -0.2
2,905,031 - +0.2
2,905,075 + +0.9
2,905,075 + -0.2
2,905,076 - -2.7
2,905,076 - -0.1
2,905,080 - -0.9

Or see this region's nucleotide sequence