Experiment: lib only
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_02774 and OHPLBJKB_02775 are separated by 238 nucleotides OHPLBJKB_02775 and OHPLBJKB_02776 are separated by 90 nucleotides
OHPLBJKB_02774: OHPLBJKB_02774 - Dimethyl sulfoxide reductase DmsA, at 2,898,892 to 2,901,336
_02774
OHPLBJKB_02775: OHPLBJKB_02775 - Serine--tRNA ligase, at 2,901,575 to 2,902,867
_02775
OHPLBJKB_02776: OHPLBJKB_02776 - Replication-associated recombination protein A, at 2,902,958 to 2,904,301
_02776
Position (kb)
2901
2902
2903 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2900.576 kb on + strand, within OHPLBJKB_02774 at 2900.576 kb on + strand, within OHPLBJKB_02774 at 2900.576 kb on + strand, within OHPLBJKB_02774 at 2900.577 kb on - strand, within OHPLBJKB_02774 at 2900.577 kb on - strand, within OHPLBJKB_02774 at 2900.620 kb on - strand, within OHPLBJKB_02774 at 2900.691 kb on + strand, within OHPLBJKB_02774 at 2900.692 kb on - strand, within OHPLBJKB_02774 at 2900.692 kb on - strand, within OHPLBJKB_02774 at 2900.692 kb on - strand, within OHPLBJKB_02774 at 2900.693 kb on + strand, within OHPLBJKB_02774 at 2900.693 kb on + strand, within OHPLBJKB_02774 at 2900.693 kb on + strand, within OHPLBJKB_02774 at 2900.693 kb on + strand, within OHPLBJKB_02774 at 2900.693 kb on + strand, within OHPLBJKB_02774 at 2900.693 kb on + strand, within OHPLBJKB_02774 at 2900.694 kb on - strand, within OHPLBJKB_02774 at 2900.694 kb on - strand, within OHPLBJKB_02774 at 2900.727 kb on - strand, within OHPLBJKB_02774 at 2900.784 kb on + strand, within OHPLBJKB_02774 at 2900.784 kb on + strand, within OHPLBJKB_02774 at 2900.785 kb on - strand, within OHPLBJKB_02774 at 2900.837 kb on + strand, within OHPLBJKB_02774 at 2900.838 kb on - strand, within OHPLBJKB_02774 at 2900.846 kb on + strand, within OHPLBJKB_02774 at 2900.847 kb on - strand, within OHPLBJKB_02774 at 2900.851 kb on - strand, within OHPLBJKB_02774 at 2900.851 kb on - strand, within OHPLBJKB_02774 at 2900.851 kb on - strand, within OHPLBJKB_02774 at 2900.886 kb on + strand, within OHPLBJKB_02774 at 2900.907 kb on - strand, within OHPLBJKB_02774 at 2900.922 kb on + strand, within OHPLBJKB_02774 at 2900.922 kb on + strand, within OHPLBJKB_02774 at 2900.922 kb on + strand, within OHPLBJKB_02774 at 2900.993 kb on + strand, within OHPLBJKB_02774 at 2900.994 kb on - strand, within OHPLBJKB_02774 at 2901.086 kb on + strand, within OHPLBJKB_02774 at 2901.086 kb on + strand, within OHPLBJKB_02774 at 2901.086 kb on + strand, within OHPLBJKB_02774 at 2901.087 kb on - strand, within OHPLBJKB_02774 at 2901.087 kb on - strand, within OHPLBJKB_02774 at 2901.087 kb on - strand, within OHPLBJKB_02774 at 2901.114 kb on + strand at 2901.114 kb on + strand at 2901.114 kb on + strand at 2901.114 kb on + strand at 2901.115 kb on - strand at 2901.115 kb on - strand at 2901.115 kb on - strand at 2901.142 kb on - strand at 2901.227 kb on - strand at 2901.337 kb on - strand at 2901.383 kb on + strand at 2901.390 kb on + strand at 2901.395 kb on - strand at 2901.395 kb on - strand at 2901.461 kb on - strand at 2901.479 kb on - strand at 2901.482 kb on - strand at 2901.484 kb on + strand at 2901.484 kb on + strand at 2901.485 kb on - strand at 2901.490 kb on + strand at 2901.490 kb on + strand at 2901.490 kb on + strand at 2901.490 kb on + strand at 2901.490 kb on + strand at 2901.490 kb on + strand at 2901.491 kb on - strand at 2901.491 kb on - strand at 2901.491 kb on - strand at 2901.501 kb on + strand at 2901.502 kb on - strand at 2901.502 kb on - strand at 2901.502 kb on - strand at 2901.506 kb on - strand at 2901.585 kb on + strand at 2901.585 kb on + strand at 2901.586 kb on - strand at 2902.929 kb on - strand at 2902.982 kb on - strand at 2903.055 kb on + strand at 2903.072 kb on + strand at 2903.089 kb on - strand at 2903.089 kb on - strand at 2903.106 kb on + strand, within OHPLBJKB_02776 at 2903.106 kb on + strand, within OHPLBJKB_02776 at 2903.165 kb on + strand, within OHPLBJKB_02776 at 2903.253 kb on + strand, within OHPLBJKB_02776 at 2903.254 kb on - strand, within OHPLBJKB_02776 at 2903.254 kb on - strand, within OHPLBJKB_02776 at 2903.254 kb on - strand, within OHPLBJKB_02776 at 2903.433 kb on + strand, within OHPLBJKB_02776 at 2903.435 kb on + strand, within OHPLBJKB_02776 at 2903.435 kb on + strand, within OHPLBJKB_02776 at 2903.476 kb on - strand, within OHPLBJKB_02776 at 2903.512 kb on + strand, within OHPLBJKB_02776 at 2903.513 kb on - strand, within OHPLBJKB_02776 at 2903.569 kb on + strand, within OHPLBJKB_02776 at 2903.594 kb on + strand, within OHPLBJKB_02776 at 2903.595 kb on - strand, within OHPLBJKB_02776 at 2903.624 kb on - strand, within OHPLBJKB_02776 at 2903.666 kb on + strand, within OHPLBJKB_02776 at 2903.734 kb on + strand, within OHPLBJKB_02776 at 2903.749 kb on - strand, within OHPLBJKB_02776 at 2903.780 kb on + strand, within OHPLBJKB_02776 at 2903.780 kb on + strand, within OHPLBJKB_02776 at 2903.781 kb on - strand, within OHPLBJKB_02776 at 2903.781 kb on - strand, within OHPLBJKB_02776 at 2903.784 kb on - strand, within OHPLBJKB_02776 at 2903.784 kb on - strand, within OHPLBJKB_02776 at 2903.804 kb on - strand, within OHPLBJKB_02776 at 2903.823 kb on + strand, within OHPLBJKB_02776
Per-strain Table
Position Strand Gene LocusTag Fraction lib only remove 2,900,576 + OHPLBJKB_02774 0.69 +0.5 2,900,576 + OHPLBJKB_02774 0.69 -0.5 2,900,576 + OHPLBJKB_02774 0.69 -0.9 2,900,577 - OHPLBJKB_02774 0.69 +0.1 2,900,577 - OHPLBJKB_02774 0.69 -0.3 2,900,620 - OHPLBJKB_02774 0.71 +0.7 2,900,691 + OHPLBJKB_02774 0.74 -0.0 2,900,692 - OHPLBJKB_02774 0.74 -2.7 2,900,692 - OHPLBJKB_02774 0.74 +0.0 2,900,692 - OHPLBJKB_02774 0.74 -0.6 2,900,693 + OHPLBJKB_02774 0.74 +0.7 2,900,693 + OHPLBJKB_02774 0.74 +0.2 2,900,693 + OHPLBJKB_02774 0.74 -0.4 2,900,693 + OHPLBJKB_02774 0.74 -0.1 2,900,693 + OHPLBJKB_02774 0.74 +3.3 2,900,693 + OHPLBJKB_02774 0.74 +0.7 2,900,694 - OHPLBJKB_02774 0.74 +0.0 2,900,694 - OHPLBJKB_02774 0.74 +0.5 2,900,727 - OHPLBJKB_02774 0.75 -0.5 2,900,784 + OHPLBJKB_02774 0.77 -0.4 2,900,784 + OHPLBJKB_02774 0.77 -1.2 2,900,785 - OHPLBJKB_02774 0.77 +0.7 2,900,837 + OHPLBJKB_02774 0.80 -0.6 2,900,838 - OHPLBJKB_02774 0.80 -0.2 2,900,846 + OHPLBJKB_02774 0.80 +0.4 2,900,847 - OHPLBJKB_02774 0.80 -0.7 2,900,851 - OHPLBJKB_02774 0.80 -0.1 2,900,851 - OHPLBJKB_02774 0.80 +0.4 2,900,851 - OHPLBJKB_02774 0.80 -0.2 2,900,886 + OHPLBJKB_02774 0.82 +0.6 2,900,907 - OHPLBJKB_02774 0.82 +0.9 2,900,922 + OHPLBJKB_02774 0.83 +0.0 2,900,922 + OHPLBJKB_02774 0.83 +0.3 2,900,922 + OHPLBJKB_02774 0.83 -0.4 2,900,993 + OHPLBJKB_02774 0.86 +0.4 2,900,994 - OHPLBJKB_02774 0.86 -0.1 2,901,086 + OHPLBJKB_02774 0.90 +0.3 2,901,086 + OHPLBJKB_02774 0.90 +1.5 2,901,086 + OHPLBJKB_02774 0.90 +0.7 2,901,087 - OHPLBJKB_02774 0.90 +0.5 2,901,087 - OHPLBJKB_02774 0.90 -0.2 2,901,087 - OHPLBJKB_02774 0.90 -0.1 2,901,114 + +0.1 2,901,114 + +0.2 2,901,114 + -0.2 2,901,114 + -1.3 2,901,115 - +0.7 2,901,115 - -0.6 2,901,115 - +1.9 2,901,142 - -0.2 2,901,227 - -0.2 2,901,337 - +1.1 2,901,383 + +0.9 2,901,390 + +0.9 2,901,395 - -0.8 2,901,395 - -1.4 2,901,461 - +0.2 2,901,479 - +0.8 2,901,482 - +0.5 2,901,484 + +1.1 2,901,484 + +1.1 2,901,485 - -0.9 2,901,490 + +0.4 2,901,490 + -0.4 2,901,490 + +0.2 2,901,490 + -1.2 2,901,490 + -0.2 2,901,490 + -0.0 2,901,491 - +0.3 2,901,491 - +0.2 2,901,491 - -0.9 2,901,501 + +0.2 2,901,502 - +0.3 2,901,502 - +0.3 2,901,502 - -0.5 2,901,506 - -0.2 2,901,585 + +0.5 2,901,585 + -0.5 2,901,586 - +0.9 2,902,929 - -0.7 2,902,982 - +0.7 2,903,055 + -0.4 2,903,072 + -0.6 2,903,089 - -0.9 2,903,089 - -0.1 2,903,106 + OHPLBJKB_02776 0.11 -0.4 2,903,106 + OHPLBJKB_02776 0.11 -0.5 2,903,165 + OHPLBJKB_02776 0.15 -0.5 2,903,253 + OHPLBJKB_02776 0.22 -0.5 2,903,254 - OHPLBJKB_02776 0.22 -1.4 2,903,254 - OHPLBJKB_02776 0.22 -0.3 2,903,254 - OHPLBJKB_02776 0.22 +0.1 2,903,433 + OHPLBJKB_02776 0.35 -0.3 2,903,435 + OHPLBJKB_02776 0.35 +0.6 2,903,435 + OHPLBJKB_02776 0.35 -0.2 2,903,476 - OHPLBJKB_02776 0.39 +0.3 2,903,512 + OHPLBJKB_02776 0.41 -0.5 2,903,513 - OHPLBJKB_02776 0.41 -1.4 2,903,569 + OHPLBJKB_02776 0.45 -0.2 2,903,594 + OHPLBJKB_02776 0.47 -1.2 2,903,595 - OHPLBJKB_02776 0.47 +0.6 2,903,624 - OHPLBJKB_02776 0.50 -0.1 2,903,666 + OHPLBJKB_02776 0.53 +0.5 2,903,734 + OHPLBJKB_02776 0.58 -0.1 2,903,749 - OHPLBJKB_02776 0.59 +0.5 2,903,780 + OHPLBJKB_02776 0.61 +1.2 2,903,780 + OHPLBJKB_02776 0.61 +0.5 2,903,781 - OHPLBJKB_02776 0.61 -0.8 2,903,781 - OHPLBJKB_02776 0.61 -0.1 2,903,784 - OHPLBJKB_02776 0.61 -1.2 2,903,784 - OHPLBJKB_02776 0.61 +0.4 2,903,804 - OHPLBJKB_02776 0.63 -0.3 2,903,823 + OHPLBJKB_02776 0.64 -0.0
Or see this region's nucleotide sequence