Experiment: lib only
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_02771 and OHPLBJKB_02772 are separated by 34 nucleotides OHPLBJKB_02772 and OHPLBJKB_02773 are separated by 1 nucleotides OHPLBJKB_02773 and OHPLBJKB_02774 are separated by 10 nucleotides
OHPLBJKB_02771: OHPLBJKB_02771 - putative hydrolase YcaC, at 2,896,738 to 2,897,364
_02771
OHPLBJKB_02772: OHPLBJKB_02772 - Anaerobic dimethyl sulfoxide reductase chain C, at 2,897,399 to 2,898,262
_02772
OHPLBJKB_02773: OHPLBJKB_02773 - Anaerobic dimethyl sulfoxide reductase chain B, at 2,898,264 to 2,898,881
_02773
OHPLBJKB_02774: OHPLBJKB_02774 - Dimethyl sulfoxide reductase DmsA, at 2,898,892 to 2,901,336
_02774
Position (kb)
2898
2899 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2897.268 kb on + strand, within OHPLBJKB_02771 at 2897.394 kb on + strand at 2897.394 kb on + strand at 2897.395 kb on - strand at 2897.400 kb on + strand at 2897.400 kb on + strand at 2897.400 kb on + strand at 2897.428 kb on + strand at 2897.439 kb on + strand at 2897.440 kb on - strand at 2897.440 kb on - strand at 2897.440 kb on - strand at 2897.440 kb on - strand at 2897.525 kb on + strand, within OHPLBJKB_02772 at 2897.526 kb on - strand, within OHPLBJKB_02772 at 2897.595 kb on + strand, within OHPLBJKB_02772 at 2897.596 kb on - strand, within OHPLBJKB_02772 at 2897.596 kb on - strand, within OHPLBJKB_02772 at 2897.596 kb on - strand, within OHPLBJKB_02772 at 2897.632 kb on + strand, within OHPLBJKB_02772 at 2897.632 kb on + strand, within OHPLBJKB_02772 at 2897.633 kb on - strand, within OHPLBJKB_02772 at 2897.633 kb on - strand, within OHPLBJKB_02772 at 2897.697 kb on - strand, within OHPLBJKB_02772 at 2897.761 kb on - strand, within OHPLBJKB_02772 at 2897.824 kb on - strand, within OHPLBJKB_02772 at 2897.853 kb on + strand, within OHPLBJKB_02772 at 2897.854 kb on - strand, within OHPLBJKB_02772 at 2898.076 kb on + strand, within OHPLBJKB_02772 at 2898.076 kb on + strand, within OHPLBJKB_02772 at 2898.077 kb on - strand, within OHPLBJKB_02772 at 2898.077 kb on - strand, within OHPLBJKB_02772 at 2898.191 kb on - strand at 2898.203 kb on + strand at 2898.353 kb on + strand, within OHPLBJKB_02773 at 2898.494 kb on - strand, within OHPLBJKB_02773 at 2898.515 kb on + strand, within OHPLBJKB_02773 at 2898.535 kb on + strand, within OHPLBJKB_02773 at 2898.536 kb on - strand, within OHPLBJKB_02773 at 2898.564 kb on - strand, within OHPLBJKB_02773 at 2898.626 kb on + strand, within OHPLBJKB_02773 at 2898.654 kb on - strand, within OHPLBJKB_02773 at 2898.656 kb on + strand, within OHPLBJKB_02773 at 2898.657 kb on - strand, within OHPLBJKB_02773 at 2898.697 kb on + strand, within OHPLBJKB_02773 at 2898.697 kb on + strand, within OHPLBJKB_02773 at 2898.698 kb on - strand, within OHPLBJKB_02773 at 2898.700 kb on + strand, within OHPLBJKB_02773 at 2898.758 kb on - strand, within OHPLBJKB_02773 at 2898.763 kb on + strand, within OHPLBJKB_02773 at 2898.764 kb on - strand, within OHPLBJKB_02773 at 2898.764 kb on - strand, within OHPLBJKB_02773 at 2898.893 kb on + strand at 2898.893 kb on + strand at 2898.893 kb on + strand at 2898.893 kb on + strand at 2898.894 kb on - strand at 2898.921 kb on + strand at 2898.921 kb on + strand at 2898.922 kb on - strand at 2898.922 kb on - strand at 2898.970 kb on + strand at 2898.971 kb on - strand at 2898.978 kb on + strand at 2898.978 kb on + strand at 2898.978 kb on + strand at 2898.978 kb on + strand at 2898.978 kb on + strand at 2898.979 kb on - strand at 2898.979 kb on - strand at 2898.979 kb on - strand at 2899.017 kb on - strand at 2899.230 kb on + strand, within OHPLBJKB_02774 at 2899.231 kb on - strand, within OHPLBJKB_02774 at 2899.231 kb on - strand, within OHPLBJKB_02774 at 2899.231 kb on - strand, within OHPLBJKB_02774 at 2899.231 kb on - strand, within OHPLBJKB_02774 at 2899.350 kb on + strand, within OHPLBJKB_02774 at 2899.443 kb on + strand, within OHPLBJKB_02774 at 2899.444 kb on - strand, within OHPLBJKB_02774 at 2899.446 kb on - strand, within OHPLBJKB_02774 at 2899.547 kb on + strand, within OHPLBJKB_02774 at 2899.548 kb on - strand, within OHPLBJKB_02774 at 2899.637 kb on + strand, within OHPLBJKB_02774 at 2899.638 kb on - strand, within OHPLBJKB_02774 at 2899.638 kb on - strand, within OHPLBJKB_02774 at 2899.647 kb on + strand, within OHPLBJKB_02774 at 2899.647 kb on + strand, within OHPLBJKB_02774 at 2899.691 kb on + strand, within OHPLBJKB_02774 at 2899.692 kb on - strand, within OHPLBJKB_02774 at 2899.692 kb on - strand, within OHPLBJKB_02774 at 2899.699 kb on - strand, within OHPLBJKB_02774 at 2899.699 kb on - strand, within OHPLBJKB_02774 at 2899.828 kb on - strand, within OHPLBJKB_02774
Per-strain Table
Position Strand Gene LocusTag Fraction lib only remove 2,897,268 + OHPLBJKB_02771 0.85 +1.8 2,897,394 + +0.3 2,897,394 + +0.0 2,897,395 - +0.2 2,897,400 + -1.4 2,897,400 + -0.9 2,897,400 + +0.5 2,897,428 + +0.6 2,897,439 + -0.2 2,897,440 - +0.9 2,897,440 - +0.8 2,897,440 - -1.9 2,897,440 - -0.1 2,897,525 + OHPLBJKB_02772 0.15 +0.3 2,897,526 - OHPLBJKB_02772 0.15 -0.9 2,897,595 + OHPLBJKB_02772 0.23 +0.4 2,897,596 - OHPLBJKB_02772 0.23 +0.6 2,897,596 - OHPLBJKB_02772 0.23 -0.5 2,897,596 - OHPLBJKB_02772 0.23 +0.3 2,897,632 + OHPLBJKB_02772 0.27 -0.8 2,897,632 + OHPLBJKB_02772 0.27 +0.6 2,897,633 - OHPLBJKB_02772 0.27 -1.2 2,897,633 - OHPLBJKB_02772 0.27 +0.9 2,897,697 - OHPLBJKB_02772 0.34 -0.6 2,897,761 - OHPLBJKB_02772 0.42 +0.3 2,897,824 - OHPLBJKB_02772 0.49 +0.8 2,897,853 + OHPLBJKB_02772 0.53 +0.3 2,897,854 - OHPLBJKB_02772 0.53 +0.3 2,898,076 + OHPLBJKB_02772 0.78 +0.5 2,898,076 + OHPLBJKB_02772 0.78 -1.0 2,898,077 - OHPLBJKB_02772 0.78 -0.5 2,898,077 - OHPLBJKB_02772 0.78 +0.1 2,898,191 - -0.6 2,898,203 + +1.0 2,898,353 + OHPLBJKB_02773 0.14 -0.7 2,898,494 - OHPLBJKB_02773 0.37 +1.0 2,898,515 + OHPLBJKB_02773 0.41 +0.1 2,898,535 + OHPLBJKB_02773 0.44 -0.9 2,898,536 - OHPLBJKB_02773 0.44 -0.1 2,898,564 - OHPLBJKB_02773 0.49 -0.1 2,898,626 + OHPLBJKB_02773 0.59 -0.4 2,898,654 - OHPLBJKB_02773 0.63 -1.7 2,898,656 + OHPLBJKB_02773 0.63 -1.2 2,898,657 - OHPLBJKB_02773 0.64 +0.5 2,898,697 + OHPLBJKB_02773 0.70 -0.9 2,898,697 + OHPLBJKB_02773 0.70 +0.5 2,898,698 - OHPLBJKB_02773 0.70 -1.1 2,898,700 + OHPLBJKB_02773 0.71 +0.1 2,898,758 - OHPLBJKB_02773 0.80 -0.5 2,898,763 + OHPLBJKB_02773 0.81 +0.8 2,898,764 - OHPLBJKB_02773 0.81 -0.8 2,898,764 - OHPLBJKB_02773 0.81 -0.1 2,898,893 + +0.1 2,898,893 + +0.1 2,898,893 + +0.8 2,898,893 + +0.1 2,898,894 - -0.2 2,898,921 + -0.1 2,898,921 + +0.2 2,898,922 - -0.3 2,898,922 - +1.7 2,898,970 + -0.0 2,898,971 - -0.9 2,898,978 + +0.2 2,898,978 + +0.3 2,898,978 + +0.1 2,898,978 + -0.6 2,898,978 + +0.2 2,898,979 - +0.7 2,898,979 - -0.6 2,898,979 - +0.7 2,899,017 - -0.0 2,899,230 + OHPLBJKB_02774 0.14 +1.3 2,899,231 - OHPLBJKB_02774 0.14 -0.2 2,899,231 - OHPLBJKB_02774 0.14 -0.0 2,899,231 - OHPLBJKB_02774 0.14 -0.2 2,899,231 - OHPLBJKB_02774 0.14 -0.0 2,899,350 + OHPLBJKB_02774 0.19 -0.2 2,899,443 + OHPLBJKB_02774 0.23 -0.5 2,899,444 - OHPLBJKB_02774 0.23 +0.1 2,899,446 - OHPLBJKB_02774 0.23 +1.6 2,899,547 + OHPLBJKB_02774 0.27 +0.1 2,899,548 - OHPLBJKB_02774 0.27 -0.7 2,899,637 + OHPLBJKB_02774 0.30 -0.2 2,899,638 - OHPLBJKB_02774 0.31 -0.4 2,899,638 - OHPLBJKB_02774 0.31 +0.0 2,899,647 + OHPLBJKB_02774 0.31 +0.9 2,899,647 + OHPLBJKB_02774 0.31 -0.2 2,899,691 + OHPLBJKB_02774 0.33 -0.2 2,899,692 - OHPLBJKB_02774 0.33 -0.2 2,899,692 - OHPLBJKB_02774 0.33 -0.0 2,899,699 - OHPLBJKB_02774 0.33 -2.1 2,899,699 - OHPLBJKB_02774 0.33 +1.4 2,899,828 - OHPLBJKB_02774 0.38 -0.2
Or see this region's nucleotide sequence