Experiment: lib only
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_02748 and OHPLBJKB_02749 are separated by 153 nucleotides OHPLBJKB_02749 and OHPLBJKB_02750 overlap by 4 nucleotides OHPLBJKB_02750 and OHPLBJKB_02751 are separated by 51 nucleotides
OHPLBJKB_02748: OHPLBJKB_02748 - hypothetical protein, at 2,869,656 to 2,870,549
_02748
OHPLBJKB_02749: OHPLBJKB_02749 - 3-deoxy-manno-octulosonate cytidylyltransferase, at 2,870,703 to 2,871,449
_02749
OHPLBJKB_02750: OHPLBJKB_02750 - hypothetical protein, at 2,871,446 to 2,871,628
_02750
OHPLBJKB_02751: OHPLBJKB_02751 - hypothetical protein, at 2,871,680 to 2,872,912
_02751
Position (kb)
2871
2872 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2870.449 kb on + strand, within OHPLBJKB_02748 at 2870.449 kb on + strand, within OHPLBJKB_02748 at 2870.449 kb on + strand, within OHPLBJKB_02748 at 2870.495 kb on + strand at 2870.495 kb on + strand at 2870.527 kb on - strand at 2870.565 kb on - strand at 2870.595 kb on + strand at 2870.595 kb on + strand at 2870.597 kb on + strand at 2870.598 kb on - strand at 2870.598 kb on - strand at 2870.598 kb on - strand at 2870.659 kb on + strand at 2871.662 kb on - strand at 2871.681 kb on + strand at 2871.681 kb on + strand at 2871.682 kb on - strand at 2871.695 kb on + strand at 2871.696 kb on - strand at 2871.696 kb on - strand at 2871.746 kb on + strand at 2871.747 kb on - strand at 2871.800 kb on + strand at 2871.801 kb on - strand at 2871.801 kb on - strand at 2871.833 kb on - strand, within OHPLBJKB_02751 at 2871.856 kb on + strand, within OHPLBJKB_02751 at 2871.857 kb on - strand, within OHPLBJKB_02751 at 2871.908 kb on + strand, within OHPLBJKB_02751 at 2871.908 kb on + strand, within OHPLBJKB_02751 at 2871.909 kb on - strand, within OHPLBJKB_02751 at 2871.909 kb on - strand, within OHPLBJKB_02751 at 2871.909 kb on - strand, within OHPLBJKB_02751 at 2871.909 kb on - strand, within OHPLBJKB_02751 at 2871.923 kb on + strand, within OHPLBJKB_02751 at 2871.923 kb on + strand, within OHPLBJKB_02751 at 2871.923 kb on + strand, within OHPLBJKB_02751 at 2871.924 kb on - strand, within OHPLBJKB_02751 at 2871.924 kb on - strand, within OHPLBJKB_02751 at 2871.942 kb on + strand, within OHPLBJKB_02751 at 2871.943 kb on - strand, within OHPLBJKB_02751 at 2871.948 kb on + strand, within OHPLBJKB_02751 at 2871.973 kb on - strand, within OHPLBJKB_02751 at 2871.988 kb on - strand, within OHPLBJKB_02751 at 2871.991 kb on + strand, within OHPLBJKB_02751 at 2872.053 kb on - strand, within OHPLBJKB_02751 at 2872.224 kb on + strand, within OHPLBJKB_02751 at 2872.224 kb on + strand, within OHPLBJKB_02751 at 2872.225 kb on - strand, within OHPLBJKB_02751 at 2872.225 kb on - strand, within OHPLBJKB_02751 at 2872.225 kb on - strand, within OHPLBJKB_02751 at 2872.251 kb on - strand, within OHPLBJKB_02751 at 2872.409 kb on - strand, within OHPLBJKB_02751 at 2872.413 kb on - strand, within OHPLBJKB_02751 at 2872.413 kb on - strand, within OHPLBJKB_02751 at 2872.516 kb on + strand, within OHPLBJKB_02751 at 2872.527 kb on - strand, within OHPLBJKB_02751 at 2872.527 kb on - strand, within OHPLBJKB_02751
Per-strain Table
Position Strand Gene LocusTag Fraction lib only remove 2,870,449 + OHPLBJKB_02748 0.89 -1.3 2,870,449 + OHPLBJKB_02748 0.89 +1.3 2,870,449 + OHPLBJKB_02748 0.89 -0.6 2,870,495 + +0.4 2,870,495 + -0.3 2,870,527 - -0.0 2,870,565 - -0.8 2,870,595 + -0.5 2,870,595 + -0.1 2,870,597 + -1.2 2,870,598 - -0.1 2,870,598 - +0.3 2,870,598 - -0.9 2,870,659 + -0.3 2,871,662 - +0.2 2,871,681 + +0.2 2,871,681 + -0.2 2,871,682 - +0.0 2,871,695 + +0.8 2,871,696 - -0.9 2,871,696 - -0.2 2,871,746 + -0.1 2,871,747 - +0.9 2,871,800 + -0.1 2,871,801 - -0.3 2,871,801 - -1.3 2,871,833 - OHPLBJKB_02751 0.12 +0.7 2,871,856 + OHPLBJKB_02751 0.14 +0.7 2,871,857 - OHPLBJKB_02751 0.14 +0.1 2,871,908 + OHPLBJKB_02751 0.18 +0.5 2,871,908 + OHPLBJKB_02751 0.18 -0.6 2,871,909 - OHPLBJKB_02751 0.19 +0.4 2,871,909 - OHPLBJKB_02751 0.19 -0.5 2,871,909 - OHPLBJKB_02751 0.19 -1.0 2,871,909 - OHPLBJKB_02751 0.19 +0.4 2,871,923 + OHPLBJKB_02751 0.20 +0.0 2,871,923 + OHPLBJKB_02751 0.20 -0.8 2,871,923 + OHPLBJKB_02751 0.20 -1.0 2,871,924 - OHPLBJKB_02751 0.20 -1.2 2,871,924 - OHPLBJKB_02751 0.20 +2.6 2,871,942 + OHPLBJKB_02751 0.21 +1.5 2,871,943 - OHPLBJKB_02751 0.21 -0.8 2,871,948 + OHPLBJKB_02751 0.22 +2.4 2,871,973 - OHPLBJKB_02751 0.24 -1.2 2,871,988 - OHPLBJKB_02751 0.25 -0.7 2,871,991 + OHPLBJKB_02751 0.25 +0.4 2,872,053 - OHPLBJKB_02751 0.30 +0.8 2,872,224 + OHPLBJKB_02751 0.44 +0.6 2,872,224 + OHPLBJKB_02751 0.44 -0.2 2,872,225 - OHPLBJKB_02751 0.44 -0.3 2,872,225 - OHPLBJKB_02751 0.44 +0.3 2,872,225 - OHPLBJKB_02751 0.44 -1.9 2,872,251 - OHPLBJKB_02751 0.46 +0.2 2,872,409 - OHPLBJKB_02751 0.59 -1.5 2,872,413 - OHPLBJKB_02751 0.59 +0.7 2,872,413 - OHPLBJKB_02751 0.59 +0.7 2,872,516 + OHPLBJKB_02751 0.68 -0.3 2,872,527 - OHPLBJKB_02751 0.69 -0.5 2,872,527 - OHPLBJKB_02751 0.69 -2.1
Or see this region's nucleotide sequence