Experiment: lib only
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_02746 and OHPLBJKB_02747 are separated by 135 nucleotides OHPLBJKB_02747 and OHPLBJKB_02748 overlap by 24 nucleotides OHPLBJKB_02748 and OHPLBJKB_02749 are separated by 153 nucleotides OHPLBJKB_02749 and OHPLBJKB_02750 overlap by 4 nucleotides
OHPLBJKB_02746: OHPLBJKB_02746 - tRNA 5-carboxymethoxyuridine methyltransferase, at 2,867,979 to 2,868,764
_02746
OHPLBJKB_02747: OHPLBJKB_02747 - hypothetical protein, at 2,868,900 to 2,869,679
_02747
OHPLBJKB_02748: OHPLBJKB_02748 - hypothetical protein, at 2,869,656 to 2,870,549
_02748
OHPLBJKB_02749: OHPLBJKB_02749 - 3-deoxy-manno-octulosonate cytidylyltransferase, at 2,870,703 to 2,871,449
_02749
OHPLBJKB_02750: OHPLBJKB_02750 - hypothetical protein, at 2,871,446 to 2,871,628
_02750
Position (kb)
2869
2870
2871 Strain fitness (log2 ratio)
-2
-1
0
1 at 2868.741 kb on - strand at 2868.810 kb on - strand at 2868.810 kb on - strand at 2868.810 kb on - strand at 2868.849 kb on + strand at 2868.849 kb on + strand at 2868.850 kb on - strand at 2868.872 kb on + strand at 2868.872 kb on + strand at 2868.872 kb on + strand at 2868.873 kb on - strand at 2868.873 kb on - strand at 2868.873 kb on - strand at 2868.873 kb on - strand at 2868.873 kb on - strand at 2868.873 kb on - strand at 2868.873 kb on - strand at 2868.873 kb on - strand at 2868.873 kb on - strand at 2868.875 kb on - strand at 2868.875 kb on - strand at 2868.875 kb on - strand at 2868.875 kb on - strand at 2868.875 kb on - strand at 2868.875 kb on - strand at 2868.875 kb on - strand at 2868.908 kb on + strand at 2868.933 kb on - strand at 2868.933 kb on - strand at 2868.966 kb on - strand at 2869.025 kb on + strand, within OHPLBJKB_02747 at 2869.029 kb on - strand, within OHPLBJKB_02747 at 2869.121 kb on + strand, within OHPLBJKB_02747 at 2869.140 kb on + strand, within OHPLBJKB_02747 at 2869.140 kb on + strand, within OHPLBJKB_02747 at 2869.140 kb on + strand, within OHPLBJKB_02747 at 2869.141 kb on - strand, within OHPLBJKB_02747 at 2869.141 kb on - strand, within OHPLBJKB_02747 at 2869.141 kb on - strand, within OHPLBJKB_02747 at 2869.141 kb on - strand, within OHPLBJKB_02747 at 2869.141 kb on - strand, within OHPLBJKB_02747 at 2869.141 kb on - strand, within OHPLBJKB_02747 at 2869.143 kb on - strand, within OHPLBJKB_02747 at 2869.164 kb on + strand, within OHPLBJKB_02747 at 2869.164 kb on + strand, within OHPLBJKB_02747 at 2869.164 kb on + strand, within OHPLBJKB_02747 at 2869.164 kb on + strand, within OHPLBJKB_02747 at 2869.166 kb on + strand, within OHPLBJKB_02747 at 2869.167 kb on - strand, within OHPLBJKB_02747 at 2869.167 kb on - strand, within OHPLBJKB_02747 at 2869.197 kb on - strand, within OHPLBJKB_02747 at 2869.208 kb on + strand, within OHPLBJKB_02747 at 2869.321 kb on + strand, within OHPLBJKB_02747 at 2869.322 kb on - strand, within OHPLBJKB_02747 at 2869.322 kb on - strand, within OHPLBJKB_02747 at 2869.504 kb on + strand, within OHPLBJKB_02747 at 2869.710 kb on - strand at 2869.756 kb on + strand, within OHPLBJKB_02748 at 2869.756 kb on + strand, within OHPLBJKB_02748 at 2869.756 kb on + strand, within OHPLBJKB_02748 at 2869.756 kb on + strand, within OHPLBJKB_02748 at 2869.757 kb on - strand, within OHPLBJKB_02748 at 2869.757 kb on - strand, within OHPLBJKB_02748 at 2869.757 kb on - strand, within OHPLBJKB_02748 at 2869.807 kb on + strand, within OHPLBJKB_02748 at 2869.861 kb on + strand, within OHPLBJKB_02748 at 2869.862 kb on - strand, within OHPLBJKB_02748 at 2869.884 kb on + strand, within OHPLBJKB_02748 at 2869.944 kb on + strand, within OHPLBJKB_02748 at 2869.956 kb on - strand, within OHPLBJKB_02748 at 2870.061 kb on - strand, within OHPLBJKB_02748 at 2870.085 kb on + strand, within OHPLBJKB_02748 at 2870.135 kb on + strand, within OHPLBJKB_02748 at 2870.323 kb on + strand, within OHPLBJKB_02748 at 2870.323 kb on + strand, within OHPLBJKB_02748 at 2870.323 kb on + strand, within OHPLBJKB_02748 at 2870.323 kb on + strand, within OHPLBJKB_02748 at 2870.324 kb on - strand, within OHPLBJKB_02748 at 2870.324 kb on - strand, within OHPLBJKB_02748 at 2870.324 kb on - strand, within OHPLBJKB_02748 at 2870.324 kb on - strand, within OHPLBJKB_02748 at 2870.324 kb on - strand, within OHPLBJKB_02748 at 2870.324 kb on - strand, within OHPLBJKB_02748 at 2870.327 kb on + strand, within OHPLBJKB_02748 at 2870.328 kb on - strand, within OHPLBJKB_02748 at 2870.328 kb on - strand, within OHPLBJKB_02748 at 2870.402 kb on + strand, within OHPLBJKB_02748 at 2870.449 kb on + strand, within OHPLBJKB_02748 at 2870.449 kb on + strand, within OHPLBJKB_02748 at 2870.449 kb on + strand, within OHPLBJKB_02748 at 2870.495 kb on + strand at 2870.495 kb on + strand at 2870.527 kb on - strand at 2870.565 kb on - strand at 2870.595 kb on + strand at 2870.595 kb on + strand at 2870.597 kb on + strand at 2870.598 kb on - strand at 2870.598 kb on - strand at 2870.598 kb on - strand at 2870.659 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction lib only remove 2,868,741 - +0.1 2,868,810 - +0.7 2,868,810 - +0.3 2,868,810 - -0.0 2,868,849 + +0.8 2,868,849 + -0.4 2,868,850 - -0.2 2,868,872 + +0.4 2,868,872 + -1.0 2,868,872 + -0.3 2,868,873 - +0.7 2,868,873 - -0.4 2,868,873 - +0.1 2,868,873 - -0.6 2,868,873 - -0.4 2,868,873 - +0.3 2,868,873 - -0.2 2,868,873 - +0.2 2,868,873 - +0.4 2,868,875 - -0.2 2,868,875 - -0.4 2,868,875 - -0.9 2,868,875 - -0.5 2,868,875 - -0.2 2,868,875 - -0.6 2,868,875 - +0.3 2,868,908 + +1.0 2,868,933 - +1.1 2,868,933 - -0.8 2,868,966 - +1.1 2,869,025 + OHPLBJKB_02747 0.16 -1.1 2,869,029 - OHPLBJKB_02747 0.17 -0.4 2,869,121 + OHPLBJKB_02747 0.28 -0.3 2,869,140 + OHPLBJKB_02747 0.31 -0.2 2,869,140 + OHPLBJKB_02747 0.31 -0.7 2,869,140 + OHPLBJKB_02747 0.31 -0.2 2,869,141 - OHPLBJKB_02747 0.31 -0.7 2,869,141 - OHPLBJKB_02747 0.31 +0.6 2,869,141 - OHPLBJKB_02747 0.31 +1.3 2,869,141 - OHPLBJKB_02747 0.31 -0.2 2,869,141 - OHPLBJKB_02747 0.31 -0.1 2,869,141 - OHPLBJKB_02747 0.31 -0.2 2,869,143 - OHPLBJKB_02747 0.31 -0.6 2,869,164 + OHPLBJKB_02747 0.34 -1.0 2,869,164 + OHPLBJKB_02747 0.34 +0.5 2,869,164 + OHPLBJKB_02747 0.34 -0.6 2,869,164 + OHPLBJKB_02747 0.34 +0.9 2,869,166 + OHPLBJKB_02747 0.34 -0.6 2,869,167 - OHPLBJKB_02747 0.34 -0.8 2,869,167 - OHPLBJKB_02747 0.34 +0.1 2,869,197 - OHPLBJKB_02747 0.38 -0.3 2,869,208 + OHPLBJKB_02747 0.39 -2.3 2,869,321 + OHPLBJKB_02747 0.54 +0.6 2,869,322 - OHPLBJKB_02747 0.54 +0.0 2,869,322 - OHPLBJKB_02747 0.54 -1.5 2,869,504 + OHPLBJKB_02747 0.77 +0.0 2,869,710 - -0.4 2,869,756 + OHPLBJKB_02748 0.11 -1.6 2,869,756 + OHPLBJKB_02748 0.11 -0.7 2,869,756 + OHPLBJKB_02748 0.11 +0.9 2,869,756 + OHPLBJKB_02748 0.11 -0.3 2,869,757 - OHPLBJKB_02748 0.11 +0.1 2,869,757 - OHPLBJKB_02748 0.11 -2.2 2,869,757 - OHPLBJKB_02748 0.11 -0.0 2,869,807 + OHPLBJKB_02748 0.17 +1.3 2,869,861 + OHPLBJKB_02748 0.23 +1.4 2,869,862 - OHPLBJKB_02748 0.23 -0.6 2,869,884 + OHPLBJKB_02748 0.26 -0.6 2,869,944 + OHPLBJKB_02748 0.32 -0.2 2,869,956 - OHPLBJKB_02748 0.34 +0.5 2,870,061 - OHPLBJKB_02748 0.45 +0.6 2,870,085 + OHPLBJKB_02748 0.48 +0.8 2,870,135 + OHPLBJKB_02748 0.54 -0.1 2,870,323 + OHPLBJKB_02748 0.75 +0.6 2,870,323 + OHPLBJKB_02748 0.75 -0.5 2,870,323 + OHPLBJKB_02748 0.75 +0.8 2,870,323 + OHPLBJKB_02748 0.75 -0.3 2,870,324 - OHPLBJKB_02748 0.75 +0.2 2,870,324 - OHPLBJKB_02748 0.75 -0.5 2,870,324 - OHPLBJKB_02748 0.75 -0.9 2,870,324 - OHPLBJKB_02748 0.75 -0.3 2,870,324 - OHPLBJKB_02748 0.75 -0.4 2,870,324 - OHPLBJKB_02748 0.75 -0.3 2,870,327 + OHPLBJKB_02748 0.75 +0.7 2,870,328 - OHPLBJKB_02748 0.75 +0.3 2,870,328 - OHPLBJKB_02748 0.75 +1.1 2,870,402 + OHPLBJKB_02748 0.83 -0.2 2,870,449 + OHPLBJKB_02748 0.89 -1.3 2,870,449 + OHPLBJKB_02748 0.89 +1.3 2,870,449 + OHPLBJKB_02748 0.89 -0.6 2,870,495 + +0.4 2,870,495 + -0.3 2,870,527 - -0.0 2,870,565 - -0.8 2,870,595 + -0.5 2,870,595 + -0.1 2,870,597 + -1.2 2,870,598 - -0.1 2,870,598 - +0.3 2,870,598 - -0.9 2,870,659 + -0.3
Or see this region's nucleotide sequence