Experiment: lib only
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_02610 and OHPLBJKB_02611 are separated by 224 nucleotides OHPLBJKB_02611 and OHPLBJKB_02612 are separated by 171 nucleotides
OHPLBJKB_02610: OHPLBJKB_02610 - hypothetical protein, at 2,721,104 to 2,722,156
_02610
OHPLBJKB_02611: OHPLBJKB_02611 - Lipid A biosynthesis lauroyltransferase, at 2,722,381 to 2,723,301
_02611
OHPLBJKB_02612: OHPLBJKB_02612 - Multidrug resistance protein MdtG, at 2,723,473 to 2,724,702
_02612
Position (kb)
2722
2723
2724 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2721.382 kb on + strand, within OHPLBJKB_02610 at 2721.382 kb on + strand, within OHPLBJKB_02610 at 2721.382 kb on + strand, within OHPLBJKB_02610 at 2721.382 kb on + strand, within OHPLBJKB_02610 at 2721.383 kb on - strand, within OHPLBJKB_02610 at 2721.383 kb on - strand, within OHPLBJKB_02610 at 2721.383 kb on - strand, within OHPLBJKB_02610 at 2721.383 kb on - strand, within OHPLBJKB_02610 at 2721.383 kb on - strand, within OHPLBJKB_02610 at 2721.383 kb on - strand, within OHPLBJKB_02610 at 2721.383 kb on - strand, within OHPLBJKB_02610 at 2721.383 kb on - strand, within OHPLBJKB_02610 at 2721.383 kb on - strand, within OHPLBJKB_02610 at 2721.425 kb on - strand, within OHPLBJKB_02610 at 2721.472 kb on + strand, within OHPLBJKB_02610 at 2721.472 kb on + strand, within OHPLBJKB_02610 at 2721.473 kb on - strand, within OHPLBJKB_02610 at 2721.488 kb on - strand, within OHPLBJKB_02610 at 2721.561 kb on + strand, within OHPLBJKB_02610 at 2721.561 kb on + strand, within OHPLBJKB_02610 at 2721.561 kb on + strand, within OHPLBJKB_02610 at 2721.562 kb on - strand, within OHPLBJKB_02610 at 2721.562 kb on - strand, within OHPLBJKB_02610 at 2721.562 kb on - strand, within OHPLBJKB_02610 at 2721.577 kb on + strand, within OHPLBJKB_02610 at 2721.583 kb on + strand, within OHPLBJKB_02610 at 2721.584 kb on - strand, within OHPLBJKB_02610 at 2721.632 kb on - strand, within OHPLBJKB_02610 at 2721.632 kb on - strand, within OHPLBJKB_02610 at 2721.676 kb on - strand, within OHPLBJKB_02610 at 2721.676 kb on - strand, within OHPLBJKB_02610 at 2721.681 kb on + strand, within OHPLBJKB_02610 at 2721.681 kb on + strand, within OHPLBJKB_02610 at 2721.682 kb on - strand, within OHPLBJKB_02610 at 2721.868 kb on + strand, within OHPLBJKB_02610 at 2721.879 kb on - strand, within OHPLBJKB_02610 at 2721.879 kb on - strand, within OHPLBJKB_02610 at 2721.887 kb on + strand, within OHPLBJKB_02610 at 2721.888 kb on - strand, within OHPLBJKB_02610 at 2721.981 kb on + strand, within OHPLBJKB_02610 at 2721.982 kb on - strand, within OHPLBJKB_02610 at 2722.020 kb on + strand, within OHPLBJKB_02610 at 2722.021 kb on - strand, within OHPLBJKB_02610 at 2722.021 kb on - strand, within OHPLBJKB_02610 at 2722.022 kb on + strand, within OHPLBJKB_02610 at 2722.022 kb on + strand, within OHPLBJKB_02610 at 2722.023 kb on - strand, within OHPLBJKB_02610 at 2722.042 kb on + strand, within OHPLBJKB_02610 at 2722.063 kb on - strand at 2722.063 kb on - strand at 2722.146 kb on - strand at 2722.146 kb on - strand at 2722.146 kb on - strand at 2722.161 kb on + strand at 2722.161 kb on + strand at 2722.161 kb on + strand at 2722.185 kb on + strand at 2722.203 kb on + strand at 2722.205 kb on + strand at 2722.205 kb on + strand at 2722.205 kb on + strand at 2722.205 kb on + strand at 2722.206 kb on - strand at 2722.206 kb on - strand at 2722.206 kb on - strand at 2722.206 kb on - strand at 2722.206 kb on - strand at 2722.270 kb on + strand at 2722.341 kb on + strand at 2722.341 kb on + strand at 2722.345 kb on + strand at 2722.345 kb on + strand at 2722.345 kb on + strand at 2722.345 kb on + strand at 2723.370 kb on - strand at 2723.410 kb on - strand at 2723.413 kb on + strand at 2723.413 kb on + strand at 2723.435 kb on + strand at 2723.473 kb on - strand at 2723.473 kb on - strand at 2723.473 kb on - strand at 2723.501 kb on + strand at 2723.502 kb on - strand at 2723.590 kb on + strand at 2723.590 kb on + strand at 2723.590 kb on + strand at 2723.631 kb on + strand, within OHPLBJKB_02612 at 2723.712 kb on + strand, within OHPLBJKB_02612 at 2723.732 kb on + strand, within OHPLBJKB_02612 at 2723.733 kb on - strand, within OHPLBJKB_02612 at 2723.828 kb on + strand, within OHPLBJKB_02612 at 2723.829 kb on - strand, within OHPLBJKB_02612 at 2723.876 kb on + strand, within OHPLBJKB_02612 at 2723.886 kb on + strand, within OHPLBJKB_02612 at 2723.886 kb on + strand, within OHPLBJKB_02612 at 2723.887 kb on - strand, within OHPLBJKB_02612 at 2723.977 kb on + strand, within OHPLBJKB_02612 at 2723.978 kb on - strand, within OHPLBJKB_02612 at 2723.984 kb on + strand, within OHPLBJKB_02612 at 2724.000 kb on + strand, within OHPLBJKB_02612 at 2724.001 kb on - strand, within OHPLBJKB_02612 at 2724.021 kb on - strand, within OHPLBJKB_02612 at 2724.117 kb on + strand, within OHPLBJKB_02612 at 2724.117 kb on + strand, within OHPLBJKB_02612 at 2724.118 kb on - strand, within OHPLBJKB_02612 at 2724.118 kb on - strand, within OHPLBJKB_02612 at 2724.153 kb on + strand, within OHPLBJKB_02612 at 2724.158 kb on + strand, within OHPLBJKB_02612 at 2724.205 kb on + strand, within OHPLBJKB_02612 at 2724.205 kb on + strand, within OHPLBJKB_02612 at 2724.205 kb on + strand, within OHPLBJKB_02612 at 2724.206 kb on - strand, within OHPLBJKB_02612 at 2724.206 kb on - strand, within OHPLBJKB_02612 at 2724.206 kb on - strand, within OHPLBJKB_02612 at 2724.235 kb on - strand, within OHPLBJKB_02612 at 2724.294 kb on - strand, within OHPLBJKB_02612
Per-strain Table
Position Strand Gene LocusTag Fraction lib only remove 2,721,382 + OHPLBJKB_02610 0.26 -2.2 2,721,382 + OHPLBJKB_02610 0.26 +0.3 2,721,382 + OHPLBJKB_02610 0.26 +2.3 2,721,382 + OHPLBJKB_02610 0.26 -0.8 2,721,383 - OHPLBJKB_02610 0.26 +0.4 2,721,383 - OHPLBJKB_02610 0.26 -0.5 2,721,383 - OHPLBJKB_02610 0.26 -0.2 2,721,383 - OHPLBJKB_02610 0.26 +0.5 2,721,383 - OHPLBJKB_02610 0.26 -0.7 2,721,383 - OHPLBJKB_02610 0.26 +0.6 2,721,383 - OHPLBJKB_02610 0.26 -0.4 2,721,383 - OHPLBJKB_02610 0.26 +0.8 2,721,383 - OHPLBJKB_02610 0.26 +0.9 2,721,425 - OHPLBJKB_02610 0.30 +0.2 2,721,472 + OHPLBJKB_02610 0.35 +0.8 2,721,472 + OHPLBJKB_02610 0.35 -0.0 2,721,473 - OHPLBJKB_02610 0.35 -2.3 2,721,488 - OHPLBJKB_02610 0.36 +0.5 2,721,561 + OHPLBJKB_02610 0.43 -0.0 2,721,561 + OHPLBJKB_02610 0.43 +0.3 2,721,561 + OHPLBJKB_02610 0.43 +0.3 2,721,562 - OHPLBJKB_02610 0.43 -0.4 2,721,562 - OHPLBJKB_02610 0.43 +0.1 2,721,562 - OHPLBJKB_02610 0.43 +0.3 2,721,577 + OHPLBJKB_02610 0.45 +0.2 2,721,583 + OHPLBJKB_02610 0.45 -0.9 2,721,584 - OHPLBJKB_02610 0.46 -0.5 2,721,632 - OHPLBJKB_02610 0.50 +1.3 2,721,632 - OHPLBJKB_02610 0.50 -0.5 2,721,676 - OHPLBJKB_02610 0.54 +0.2 2,721,676 - OHPLBJKB_02610 0.54 +0.6 2,721,681 + OHPLBJKB_02610 0.55 +0.7 2,721,681 + OHPLBJKB_02610 0.55 -0.4 2,721,682 - OHPLBJKB_02610 0.55 -0.4 2,721,868 + OHPLBJKB_02610 0.73 +0.7 2,721,879 - OHPLBJKB_02610 0.74 -0.4 2,721,879 - OHPLBJKB_02610 0.74 -0.3 2,721,887 + OHPLBJKB_02610 0.74 -1.2 2,721,888 - OHPLBJKB_02610 0.74 -1.5 2,721,981 + OHPLBJKB_02610 0.83 +0.5 2,721,982 - OHPLBJKB_02610 0.83 +1.2 2,722,020 + OHPLBJKB_02610 0.87 -0.1 2,722,021 - OHPLBJKB_02610 0.87 -0.5 2,722,021 - OHPLBJKB_02610 0.87 -0.2 2,722,022 + OHPLBJKB_02610 0.87 -0.8 2,722,022 + OHPLBJKB_02610 0.87 -0.5 2,722,023 - OHPLBJKB_02610 0.87 -0.4 2,722,042 + OHPLBJKB_02610 0.89 +0.7 2,722,063 - -0.0 2,722,063 - -0.3 2,722,146 - +0.8 2,722,146 - +0.4 2,722,146 - -0.9 2,722,161 + +0.8 2,722,161 + +0.5 2,722,161 + +0.0 2,722,185 + +1.5 2,722,203 + +0.3 2,722,205 + +0.2 2,722,205 + +1.0 2,722,205 + -0.0 2,722,205 + -0.2 2,722,206 - -0.9 2,722,206 - -0.3 2,722,206 - -0.3 2,722,206 - -1.2 2,722,206 - +1.0 2,722,270 + +0.4 2,722,341 + +0.1 2,722,341 + +0.1 2,722,345 + +0.9 2,722,345 + +1.4 2,722,345 + +0.5 2,722,345 + -0.2 2,723,370 - -2.4 2,723,410 - +0.1 2,723,413 + +0.4 2,723,413 + +0.4 2,723,435 + +0.1 2,723,473 - -1.3 2,723,473 - +0.7 2,723,473 - +0.3 2,723,501 + -1.0 2,723,502 - +1.2 2,723,590 + +0.6 2,723,590 + +0.2 2,723,590 + -0.9 2,723,631 + OHPLBJKB_02612 0.13 -1.7 2,723,712 + OHPLBJKB_02612 0.19 -0.6 2,723,732 + OHPLBJKB_02612 0.21 +0.8 2,723,733 - OHPLBJKB_02612 0.21 +0.7 2,723,828 + OHPLBJKB_02612 0.29 +0.4 2,723,829 - OHPLBJKB_02612 0.29 +1.5 2,723,876 + OHPLBJKB_02612 0.33 +0.5 2,723,886 + OHPLBJKB_02612 0.34 -0.8 2,723,886 + OHPLBJKB_02612 0.34 -0.1 2,723,887 - OHPLBJKB_02612 0.34 -1.3 2,723,977 + OHPLBJKB_02612 0.41 -1.0 2,723,978 - OHPLBJKB_02612 0.41 -0.2 2,723,984 + OHPLBJKB_02612 0.42 +1.0 2,724,000 + OHPLBJKB_02612 0.43 -0.1 2,724,001 - OHPLBJKB_02612 0.43 +0.3 2,724,021 - OHPLBJKB_02612 0.45 -0.2 2,724,117 + OHPLBJKB_02612 0.52 +0.8 2,724,117 + OHPLBJKB_02612 0.52 -0.2 2,724,118 - OHPLBJKB_02612 0.52 -0.4 2,724,118 - OHPLBJKB_02612 0.52 +1.1 2,724,153 + OHPLBJKB_02612 0.55 +0.2 2,724,158 + OHPLBJKB_02612 0.56 -0.3 2,724,205 + OHPLBJKB_02612 0.60 +0.9 2,724,205 + OHPLBJKB_02612 0.60 +0.5 2,724,205 + OHPLBJKB_02612 0.60 +0.9 2,724,206 - OHPLBJKB_02612 0.60 -0.6 2,724,206 - OHPLBJKB_02612 0.60 -0.0 2,724,206 - OHPLBJKB_02612 0.60 -0.4 2,724,235 - OHPLBJKB_02612 0.62 -0.2 2,724,294 - OHPLBJKB_02612 0.67 -0.8
Or see this region's nucleotide sequence