Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_02611

Experiment: lib only

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOHPLBJKB_02610 and OHPLBJKB_02611 are separated by 224 nucleotidesOHPLBJKB_02611 and OHPLBJKB_02612 are separated by 171 nucleotides OHPLBJKB_02610: OHPLBJKB_02610 - hypothetical protein, at 2,721,104 to 2,722,156 _02610 OHPLBJKB_02611: OHPLBJKB_02611 - Lipid A biosynthesis lauroyltransferase, at 2,722,381 to 2,723,301 _02611 OHPLBJKB_02612: OHPLBJKB_02612 - Multidrug resistance protein MdtG, at 2,723,473 to 2,724,702 _02612 Position (kb) 2722 2723 2724Strain fitness (log2 ratio) -2 -1 0 1 2at 2721.382 kb on + strand, within OHPLBJKB_02610at 2721.382 kb on + strand, within OHPLBJKB_02610at 2721.382 kb on + strand, within OHPLBJKB_02610at 2721.382 kb on + strand, within OHPLBJKB_02610at 2721.383 kb on - strand, within OHPLBJKB_02610at 2721.383 kb on - strand, within OHPLBJKB_02610at 2721.383 kb on - strand, within OHPLBJKB_02610at 2721.383 kb on - strand, within OHPLBJKB_02610at 2721.383 kb on - strand, within OHPLBJKB_02610at 2721.383 kb on - strand, within OHPLBJKB_02610at 2721.383 kb on - strand, within OHPLBJKB_02610at 2721.383 kb on - strand, within OHPLBJKB_02610at 2721.383 kb on - strand, within OHPLBJKB_02610at 2721.425 kb on - strand, within OHPLBJKB_02610at 2721.472 kb on + strand, within OHPLBJKB_02610at 2721.472 kb on + strand, within OHPLBJKB_02610at 2721.473 kb on - strand, within OHPLBJKB_02610at 2721.488 kb on - strand, within OHPLBJKB_02610at 2721.561 kb on + strand, within OHPLBJKB_02610at 2721.561 kb on + strand, within OHPLBJKB_02610at 2721.561 kb on + strand, within OHPLBJKB_02610at 2721.562 kb on - strand, within OHPLBJKB_02610at 2721.562 kb on - strand, within OHPLBJKB_02610at 2721.562 kb on - strand, within OHPLBJKB_02610at 2721.577 kb on + strand, within OHPLBJKB_02610at 2721.583 kb on + strand, within OHPLBJKB_02610at 2721.584 kb on - strand, within OHPLBJKB_02610at 2721.632 kb on - strand, within OHPLBJKB_02610at 2721.632 kb on - strand, within OHPLBJKB_02610at 2721.676 kb on - strand, within OHPLBJKB_02610at 2721.676 kb on - strand, within OHPLBJKB_02610at 2721.681 kb on + strand, within OHPLBJKB_02610at 2721.681 kb on + strand, within OHPLBJKB_02610at 2721.682 kb on - strand, within OHPLBJKB_02610at 2721.868 kb on + strand, within OHPLBJKB_02610at 2721.879 kb on - strand, within OHPLBJKB_02610at 2721.879 kb on - strand, within OHPLBJKB_02610at 2721.887 kb on + strand, within OHPLBJKB_02610at 2721.888 kb on - strand, within OHPLBJKB_02610at 2721.981 kb on + strand, within OHPLBJKB_02610at 2721.982 kb on - strand, within OHPLBJKB_02610at 2722.020 kb on + strand, within OHPLBJKB_02610at 2722.021 kb on - strand, within OHPLBJKB_02610at 2722.021 kb on - strand, within OHPLBJKB_02610at 2722.022 kb on + strand, within OHPLBJKB_02610at 2722.022 kb on + strand, within OHPLBJKB_02610at 2722.023 kb on - strand, within OHPLBJKB_02610at 2722.042 kb on + strand, within OHPLBJKB_02610at 2722.063 kb on - strandat 2722.063 kb on - strandat 2722.146 kb on - strandat 2722.146 kb on - strandat 2722.146 kb on - strandat 2722.161 kb on + strandat 2722.161 kb on + strandat 2722.161 kb on + strandat 2722.185 kb on + strandat 2722.203 kb on + strandat 2722.205 kb on + strandat 2722.205 kb on + strandat 2722.205 kb on + strandat 2722.205 kb on + strandat 2722.206 kb on - strandat 2722.206 kb on - strandat 2722.206 kb on - strandat 2722.206 kb on - strandat 2722.206 kb on - strandat 2722.270 kb on + strandat 2722.341 kb on + strandat 2722.341 kb on + strandat 2722.345 kb on + strandat 2722.345 kb on + strandat 2722.345 kb on + strandat 2722.345 kb on + strandat 2723.370 kb on - strandat 2723.410 kb on - strandat 2723.413 kb on + strandat 2723.413 kb on + strandat 2723.435 kb on + strandat 2723.473 kb on - strandat 2723.473 kb on - strandat 2723.473 kb on - strandat 2723.501 kb on + strandat 2723.502 kb on - strandat 2723.590 kb on + strandat 2723.590 kb on + strandat 2723.590 kb on + strandat 2723.631 kb on + strand, within OHPLBJKB_02612at 2723.712 kb on + strand, within OHPLBJKB_02612at 2723.732 kb on + strand, within OHPLBJKB_02612at 2723.733 kb on - strand, within OHPLBJKB_02612at 2723.828 kb on + strand, within OHPLBJKB_02612at 2723.829 kb on - strand, within OHPLBJKB_02612at 2723.876 kb on + strand, within OHPLBJKB_02612at 2723.886 kb on + strand, within OHPLBJKB_02612at 2723.886 kb on + strand, within OHPLBJKB_02612at 2723.887 kb on - strand, within OHPLBJKB_02612at 2723.977 kb on + strand, within OHPLBJKB_02612at 2723.978 kb on - strand, within OHPLBJKB_02612at 2723.984 kb on + strand, within OHPLBJKB_02612at 2724.000 kb on + strand, within OHPLBJKB_02612at 2724.001 kb on - strand, within OHPLBJKB_02612at 2724.021 kb on - strand, within OHPLBJKB_02612at 2724.117 kb on + strand, within OHPLBJKB_02612at 2724.117 kb on + strand, within OHPLBJKB_02612at 2724.118 kb on - strand, within OHPLBJKB_02612at 2724.118 kb on - strand, within OHPLBJKB_02612at 2724.153 kb on + strand, within OHPLBJKB_02612at 2724.158 kb on + strand, within OHPLBJKB_02612at 2724.205 kb on + strand, within OHPLBJKB_02612at 2724.205 kb on + strand, within OHPLBJKB_02612at 2724.205 kb on + strand, within OHPLBJKB_02612at 2724.206 kb on - strand, within OHPLBJKB_02612at 2724.206 kb on - strand, within OHPLBJKB_02612at 2724.206 kb on - strand, within OHPLBJKB_02612at 2724.235 kb on - strand, within OHPLBJKB_02612at 2724.294 kb on - strand, within OHPLBJKB_02612

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Per-strain Table

Position Strand Gene LocusTag Fraction lib only
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2,721,382 + OHPLBJKB_02610 0.26 -2.2
2,721,382 + OHPLBJKB_02610 0.26 +0.3
2,721,382 + OHPLBJKB_02610 0.26 +2.3
2,721,382 + OHPLBJKB_02610 0.26 -0.8
2,721,383 - OHPLBJKB_02610 0.26 +0.4
2,721,383 - OHPLBJKB_02610 0.26 -0.5
2,721,383 - OHPLBJKB_02610 0.26 -0.2
2,721,383 - OHPLBJKB_02610 0.26 +0.5
2,721,383 - OHPLBJKB_02610 0.26 -0.7
2,721,383 - OHPLBJKB_02610 0.26 +0.6
2,721,383 - OHPLBJKB_02610 0.26 -0.4
2,721,383 - OHPLBJKB_02610 0.26 +0.8
2,721,383 - OHPLBJKB_02610 0.26 +0.9
2,721,425 - OHPLBJKB_02610 0.30 +0.2
2,721,472 + OHPLBJKB_02610 0.35 +0.8
2,721,472 + OHPLBJKB_02610 0.35 -0.0
2,721,473 - OHPLBJKB_02610 0.35 -2.3
2,721,488 - OHPLBJKB_02610 0.36 +0.5
2,721,561 + OHPLBJKB_02610 0.43 -0.0
2,721,561 + OHPLBJKB_02610 0.43 +0.3
2,721,561 + OHPLBJKB_02610 0.43 +0.3
2,721,562 - OHPLBJKB_02610 0.43 -0.4
2,721,562 - OHPLBJKB_02610 0.43 +0.1
2,721,562 - OHPLBJKB_02610 0.43 +0.3
2,721,577 + OHPLBJKB_02610 0.45 +0.2
2,721,583 + OHPLBJKB_02610 0.45 -0.9
2,721,584 - OHPLBJKB_02610 0.46 -0.5
2,721,632 - OHPLBJKB_02610 0.50 +1.3
2,721,632 - OHPLBJKB_02610 0.50 -0.5
2,721,676 - OHPLBJKB_02610 0.54 +0.2
2,721,676 - OHPLBJKB_02610 0.54 +0.6
2,721,681 + OHPLBJKB_02610 0.55 +0.7
2,721,681 + OHPLBJKB_02610 0.55 -0.4
2,721,682 - OHPLBJKB_02610 0.55 -0.4
2,721,868 + OHPLBJKB_02610 0.73 +0.7
2,721,879 - OHPLBJKB_02610 0.74 -0.4
2,721,879 - OHPLBJKB_02610 0.74 -0.3
2,721,887 + OHPLBJKB_02610 0.74 -1.2
2,721,888 - OHPLBJKB_02610 0.74 -1.5
2,721,981 + OHPLBJKB_02610 0.83 +0.5
2,721,982 - OHPLBJKB_02610 0.83 +1.2
2,722,020 + OHPLBJKB_02610 0.87 -0.1
2,722,021 - OHPLBJKB_02610 0.87 -0.5
2,722,021 - OHPLBJKB_02610 0.87 -0.2
2,722,022 + OHPLBJKB_02610 0.87 -0.8
2,722,022 + OHPLBJKB_02610 0.87 -0.5
2,722,023 - OHPLBJKB_02610 0.87 -0.4
2,722,042 + OHPLBJKB_02610 0.89 +0.7
2,722,063 - -0.0
2,722,063 - -0.3
2,722,146 - +0.8
2,722,146 - +0.4
2,722,146 - -0.9
2,722,161 + +0.8
2,722,161 + +0.5
2,722,161 + +0.0
2,722,185 + +1.5
2,722,203 + +0.3
2,722,205 + +0.2
2,722,205 + +1.0
2,722,205 + -0.0
2,722,205 + -0.2
2,722,206 - -0.9
2,722,206 - -0.3
2,722,206 - -0.3
2,722,206 - -1.2
2,722,206 - +1.0
2,722,270 + +0.4
2,722,341 + +0.1
2,722,341 + +0.1
2,722,345 + +0.9
2,722,345 + +1.4
2,722,345 + +0.5
2,722,345 + -0.2
2,723,370 - -2.4
2,723,410 - +0.1
2,723,413 + +0.4
2,723,413 + +0.4
2,723,435 + +0.1
2,723,473 - -1.3
2,723,473 - +0.7
2,723,473 - +0.3
2,723,501 + -1.0
2,723,502 - +1.2
2,723,590 + +0.6
2,723,590 + +0.2
2,723,590 + -0.9
2,723,631 + OHPLBJKB_02612 0.13 -1.7
2,723,712 + OHPLBJKB_02612 0.19 -0.6
2,723,732 + OHPLBJKB_02612 0.21 +0.8
2,723,733 - OHPLBJKB_02612 0.21 +0.7
2,723,828 + OHPLBJKB_02612 0.29 +0.4
2,723,829 - OHPLBJKB_02612 0.29 +1.5
2,723,876 + OHPLBJKB_02612 0.33 +0.5
2,723,886 + OHPLBJKB_02612 0.34 -0.8
2,723,886 + OHPLBJKB_02612 0.34 -0.1
2,723,887 - OHPLBJKB_02612 0.34 -1.3
2,723,977 + OHPLBJKB_02612 0.41 -1.0
2,723,978 - OHPLBJKB_02612 0.41 -0.2
2,723,984 + OHPLBJKB_02612 0.42 +1.0
2,724,000 + OHPLBJKB_02612 0.43 -0.1
2,724,001 - OHPLBJKB_02612 0.43 +0.3
2,724,021 - OHPLBJKB_02612 0.45 -0.2
2,724,117 + OHPLBJKB_02612 0.52 +0.8
2,724,117 + OHPLBJKB_02612 0.52 -0.2
2,724,118 - OHPLBJKB_02612 0.52 -0.4
2,724,118 - OHPLBJKB_02612 0.52 +1.1
2,724,153 + OHPLBJKB_02612 0.55 +0.2
2,724,158 + OHPLBJKB_02612 0.56 -0.3
2,724,205 + OHPLBJKB_02612 0.60 +0.9
2,724,205 + OHPLBJKB_02612 0.60 +0.5
2,724,205 + OHPLBJKB_02612 0.60 +0.9
2,724,206 - OHPLBJKB_02612 0.60 -0.6
2,724,206 - OHPLBJKB_02612 0.60 -0.0
2,724,206 - OHPLBJKB_02612 0.60 -0.4
2,724,235 - OHPLBJKB_02612 0.62 -0.2
2,724,294 - OHPLBJKB_02612 0.67 -0.8

Or see this region's nucleotide sequence