Experiment: lib only
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_02608 and OHPLBJKB_02609 are separated by 3 nucleotides OHPLBJKB_02609 and OHPLBJKB_02610 are separated by 41 nucleotides OHPLBJKB_02610 and OHPLBJKB_02611 are separated by 224 nucleotides
OHPLBJKB_02608: OHPLBJKB_02608 - Cytochrome b561, at 2,719,917 to 2,720,483
_02608
OHPLBJKB_02609: OHPLBJKB_02609 - Protein YceI, at 2,720,487 to 2,721,062
_02609
OHPLBJKB_02610: OHPLBJKB_02610 - hypothetical protein, at 2,721,104 to 2,722,156
_02610
OHPLBJKB_02611: OHPLBJKB_02611 - Lipid A biosynthesis lauroyltransferase, at 2,722,381 to 2,723,301
_02611
Position (kb)
2721
2722
2723 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2720.109 kb on - strand, within OHPLBJKB_02608 at 2720.109 kb on - strand, within OHPLBJKB_02608 at 2720.131 kb on + strand, within OHPLBJKB_02608 at 2720.132 kb on - strand, within OHPLBJKB_02608 at 2720.208 kb on + strand, within OHPLBJKB_02608 at 2720.208 kb on + strand, within OHPLBJKB_02608 at 2720.209 kb on - strand, within OHPLBJKB_02608 at 2720.209 kb on - strand, within OHPLBJKB_02608 at 2720.209 kb on - strand, within OHPLBJKB_02608 at 2720.209 kb on - strand, within OHPLBJKB_02608 at 2720.209 kb on - strand, within OHPLBJKB_02608 at 2720.212 kb on + strand, within OHPLBJKB_02608 at 2720.212 kb on + strand, within OHPLBJKB_02608 at 2720.212 kb on + strand, within OHPLBJKB_02608 at 2720.213 kb on - strand, within OHPLBJKB_02608 at 2720.213 kb on - strand, within OHPLBJKB_02608 at 2720.213 kb on - strand, within OHPLBJKB_02608 at 2720.213 kb on - strand, within OHPLBJKB_02608 at 2720.213 kb on - strand, within OHPLBJKB_02608 at 2720.374 kb on + strand, within OHPLBJKB_02608 at 2720.375 kb on - strand, within OHPLBJKB_02608 at 2720.377 kb on + strand, within OHPLBJKB_02608 at 2720.377 kb on + strand, within OHPLBJKB_02608 at 2720.378 kb on - strand, within OHPLBJKB_02608 at 2720.480 kb on - strand at 2720.622 kb on - strand, within OHPLBJKB_02609 at 2720.711 kb on + strand, within OHPLBJKB_02609 at 2720.712 kb on - strand, within OHPLBJKB_02609 at 2720.712 kb on - strand, within OHPLBJKB_02609 at 2720.732 kb on + strand, within OHPLBJKB_02609 at 2720.732 kb on + strand, within OHPLBJKB_02609 at 2720.733 kb on - strand, within OHPLBJKB_02609 at 2720.733 kb on - strand, within OHPLBJKB_02609 at 2720.847 kb on - strand, within OHPLBJKB_02609 at 2720.906 kb on - strand, within OHPLBJKB_02609 at 2720.936 kb on + strand, within OHPLBJKB_02609 at 2720.970 kb on - strand, within OHPLBJKB_02609 at 2721.002 kb on - strand, within OHPLBJKB_02609 at 2721.101 kb on + strand at 2721.102 kb on - strand at 2721.102 kb on - strand at 2721.102 kb on - strand at 2721.102 kb on - strand at 2721.102 kb on - strand at 2721.102 kb on - strand at 2721.102 kb on - strand at 2721.105 kb on + strand at 2721.106 kb on - strand at 2721.136 kb on + strand at 2721.136 kb on + strand at 2721.136 kb on + strand at 2721.157 kb on + strand at 2721.157 kb on + strand at 2721.158 kb on - strand at 2721.160 kb on + strand at 2721.169 kb on + strand at 2721.170 kb on - strand at 2721.289 kb on + strand, within OHPLBJKB_02610 at 2721.325 kb on + strand, within OHPLBJKB_02610 at 2721.325 kb on + strand, within OHPLBJKB_02610 at 2721.326 kb on - strand, within OHPLBJKB_02610 at 2721.326 kb on - strand, within OHPLBJKB_02610 at 2721.382 kb on + strand, within OHPLBJKB_02610 at 2721.382 kb on + strand, within OHPLBJKB_02610 at 2721.382 kb on + strand, within OHPLBJKB_02610 at 2721.382 kb on + strand, within OHPLBJKB_02610 at 2721.383 kb on - strand, within OHPLBJKB_02610 at 2721.383 kb on - strand, within OHPLBJKB_02610 at 2721.383 kb on - strand, within OHPLBJKB_02610 at 2721.383 kb on - strand, within OHPLBJKB_02610 at 2721.383 kb on - strand, within OHPLBJKB_02610 at 2721.383 kb on - strand, within OHPLBJKB_02610 at 2721.383 kb on - strand, within OHPLBJKB_02610 at 2721.383 kb on - strand, within OHPLBJKB_02610 at 2721.383 kb on - strand, within OHPLBJKB_02610 at 2721.425 kb on - strand, within OHPLBJKB_02610 at 2721.472 kb on + strand, within OHPLBJKB_02610 at 2721.472 kb on + strand, within OHPLBJKB_02610 at 2721.473 kb on - strand, within OHPLBJKB_02610 at 2721.488 kb on - strand, within OHPLBJKB_02610 at 2721.561 kb on + strand, within OHPLBJKB_02610 at 2721.561 kb on + strand, within OHPLBJKB_02610 at 2721.561 kb on + strand, within OHPLBJKB_02610 at 2721.562 kb on - strand, within OHPLBJKB_02610 at 2721.562 kb on - strand, within OHPLBJKB_02610 at 2721.562 kb on - strand, within OHPLBJKB_02610 at 2721.577 kb on + strand, within OHPLBJKB_02610 at 2721.583 kb on + strand, within OHPLBJKB_02610 at 2721.584 kb on - strand, within OHPLBJKB_02610 at 2721.632 kb on - strand, within OHPLBJKB_02610 at 2721.632 kb on - strand, within OHPLBJKB_02610 at 2721.676 kb on - strand, within OHPLBJKB_02610 at 2721.676 kb on - strand, within OHPLBJKB_02610 at 2721.681 kb on + strand, within OHPLBJKB_02610 at 2721.681 kb on + strand, within OHPLBJKB_02610 at 2721.682 kb on - strand, within OHPLBJKB_02610 at 2721.868 kb on + strand, within OHPLBJKB_02610 at 2721.879 kb on - strand, within OHPLBJKB_02610 at 2721.879 kb on - strand, within OHPLBJKB_02610 at 2721.887 kb on + strand, within OHPLBJKB_02610 at 2721.888 kb on - strand, within OHPLBJKB_02610 at 2721.981 kb on + strand, within OHPLBJKB_02610 at 2721.982 kb on - strand, within OHPLBJKB_02610 at 2722.020 kb on + strand, within OHPLBJKB_02610 at 2722.021 kb on - strand, within OHPLBJKB_02610 at 2722.021 kb on - strand, within OHPLBJKB_02610 at 2722.022 kb on + strand, within OHPLBJKB_02610 at 2722.022 kb on + strand, within OHPLBJKB_02610 at 2722.023 kb on - strand, within OHPLBJKB_02610 at 2722.042 kb on + strand, within OHPLBJKB_02610 at 2722.063 kb on - strand at 2722.063 kb on - strand at 2722.146 kb on - strand at 2722.146 kb on - strand at 2722.146 kb on - strand at 2722.161 kb on + strand at 2722.161 kb on + strand at 2722.161 kb on + strand at 2722.185 kb on + strand at 2722.203 kb on + strand at 2722.205 kb on + strand at 2722.205 kb on + strand at 2722.205 kb on + strand at 2722.205 kb on + strand at 2722.206 kb on - strand at 2722.206 kb on - strand at 2722.206 kb on - strand at 2722.206 kb on - strand at 2722.206 kb on - strand at 2722.270 kb on + strand at 2722.341 kb on + strand at 2722.341 kb on + strand at 2722.345 kb on + strand at 2722.345 kb on + strand at 2722.345 kb on + strand at 2722.345 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction lib only remove 2,720,109 - OHPLBJKB_02608 0.34 -1.2 2,720,109 - OHPLBJKB_02608 0.34 +1.6 2,720,131 + OHPLBJKB_02608 0.38 -0.4 2,720,132 - OHPLBJKB_02608 0.38 -0.1 2,720,208 + OHPLBJKB_02608 0.51 -0.1 2,720,208 + OHPLBJKB_02608 0.51 +0.2 2,720,209 - OHPLBJKB_02608 0.51 -1.2 2,720,209 - OHPLBJKB_02608 0.51 +0.7 2,720,209 - OHPLBJKB_02608 0.51 -1.5 2,720,209 - OHPLBJKB_02608 0.51 -0.3 2,720,209 - OHPLBJKB_02608 0.51 -2.0 2,720,212 + OHPLBJKB_02608 0.52 -0.5 2,720,212 + OHPLBJKB_02608 0.52 -2.3 2,720,212 + OHPLBJKB_02608 0.52 +0.5 2,720,213 - OHPLBJKB_02608 0.52 -0.9 2,720,213 - OHPLBJKB_02608 0.52 +0.9 2,720,213 - OHPLBJKB_02608 0.52 -0.3 2,720,213 - OHPLBJKB_02608 0.52 -0.2 2,720,213 - OHPLBJKB_02608 0.52 +0.4 2,720,374 + OHPLBJKB_02608 0.81 -0.5 2,720,375 - OHPLBJKB_02608 0.81 -1.5 2,720,377 + OHPLBJKB_02608 0.81 +0.9 2,720,377 + OHPLBJKB_02608 0.81 +1.2 2,720,378 - OHPLBJKB_02608 0.81 +0.3 2,720,480 - -0.8 2,720,622 - OHPLBJKB_02609 0.23 -0.3 2,720,711 + OHPLBJKB_02609 0.39 +0.1 2,720,712 - OHPLBJKB_02609 0.39 -0.6 2,720,712 - OHPLBJKB_02609 0.39 -1.9 2,720,732 + OHPLBJKB_02609 0.43 -0.1 2,720,732 + OHPLBJKB_02609 0.43 -1.6 2,720,733 - OHPLBJKB_02609 0.43 +0.8 2,720,733 - OHPLBJKB_02609 0.43 +0.5 2,720,847 - OHPLBJKB_02609 0.62 -0.5 2,720,906 - OHPLBJKB_02609 0.73 -0.0 2,720,936 + OHPLBJKB_02609 0.78 -0.2 2,720,970 - OHPLBJKB_02609 0.84 +0.0 2,721,002 - OHPLBJKB_02609 0.89 -0.0 2,721,101 + +1.0 2,721,102 - +0.3 2,721,102 - +1.1 2,721,102 - +0.1 2,721,102 - +0.3 2,721,102 - +0.8 2,721,102 - +0.8 2,721,102 - +0.9 2,721,105 + +0.3 2,721,106 - -0.0 2,721,136 + -0.9 2,721,136 + +0.7 2,721,136 + -2.0 2,721,157 + +0.9 2,721,157 + -0.9 2,721,158 - -0.6 2,721,160 + -0.6 2,721,169 + +0.7 2,721,170 - +0.3 2,721,289 + OHPLBJKB_02610 0.18 -0.6 2,721,325 + OHPLBJKB_02610 0.21 +2.7 2,721,325 + OHPLBJKB_02610 0.21 +0.0 2,721,326 - OHPLBJKB_02610 0.21 +0.4 2,721,326 - OHPLBJKB_02610 0.21 -0.5 2,721,382 + OHPLBJKB_02610 0.26 -2.2 2,721,382 + OHPLBJKB_02610 0.26 +0.3 2,721,382 + OHPLBJKB_02610 0.26 +2.3 2,721,382 + OHPLBJKB_02610 0.26 -0.8 2,721,383 - OHPLBJKB_02610 0.26 +0.4 2,721,383 - OHPLBJKB_02610 0.26 -0.5 2,721,383 - OHPLBJKB_02610 0.26 -0.2 2,721,383 - OHPLBJKB_02610 0.26 +0.5 2,721,383 - OHPLBJKB_02610 0.26 -0.7 2,721,383 - OHPLBJKB_02610 0.26 +0.6 2,721,383 - OHPLBJKB_02610 0.26 -0.4 2,721,383 - OHPLBJKB_02610 0.26 +0.8 2,721,383 - OHPLBJKB_02610 0.26 +0.9 2,721,425 - OHPLBJKB_02610 0.30 +0.2 2,721,472 + OHPLBJKB_02610 0.35 +0.8 2,721,472 + OHPLBJKB_02610 0.35 -0.0 2,721,473 - OHPLBJKB_02610 0.35 -2.3 2,721,488 - OHPLBJKB_02610 0.36 +0.5 2,721,561 + OHPLBJKB_02610 0.43 -0.0 2,721,561 + OHPLBJKB_02610 0.43 +0.3 2,721,561 + OHPLBJKB_02610 0.43 +0.3 2,721,562 - OHPLBJKB_02610 0.43 -0.4 2,721,562 - OHPLBJKB_02610 0.43 +0.1 2,721,562 - OHPLBJKB_02610 0.43 +0.3 2,721,577 + OHPLBJKB_02610 0.45 +0.2 2,721,583 + OHPLBJKB_02610 0.45 -0.9 2,721,584 - OHPLBJKB_02610 0.46 -0.5 2,721,632 - OHPLBJKB_02610 0.50 +1.3 2,721,632 - OHPLBJKB_02610 0.50 -0.5 2,721,676 - OHPLBJKB_02610 0.54 +0.2 2,721,676 - OHPLBJKB_02610 0.54 +0.6 2,721,681 + OHPLBJKB_02610 0.55 +0.7 2,721,681 + OHPLBJKB_02610 0.55 -0.4 2,721,682 - OHPLBJKB_02610 0.55 -0.4 2,721,868 + OHPLBJKB_02610 0.73 +0.7 2,721,879 - OHPLBJKB_02610 0.74 -0.4 2,721,879 - OHPLBJKB_02610 0.74 -0.3 2,721,887 + OHPLBJKB_02610 0.74 -1.2 2,721,888 - OHPLBJKB_02610 0.74 -1.5 2,721,981 + OHPLBJKB_02610 0.83 +0.5 2,721,982 - OHPLBJKB_02610 0.83 +1.2 2,722,020 + OHPLBJKB_02610 0.87 -0.1 2,722,021 - OHPLBJKB_02610 0.87 -0.5 2,722,021 - OHPLBJKB_02610 0.87 -0.2 2,722,022 + OHPLBJKB_02610 0.87 -0.8 2,722,022 + OHPLBJKB_02610 0.87 -0.5 2,722,023 - OHPLBJKB_02610 0.87 -0.4 2,722,042 + OHPLBJKB_02610 0.89 +0.7 2,722,063 - -0.0 2,722,063 - -0.3 2,722,146 - +0.8 2,722,146 - +0.4 2,722,146 - -0.9 2,722,161 + +0.8 2,722,161 + +0.5 2,722,161 + +0.0 2,722,185 + +1.5 2,722,203 + +0.3 2,722,205 + +0.2 2,722,205 + +1.0 2,722,205 + -0.0 2,722,205 + -0.2 2,722,206 - -0.9 2,722,206 - -0.3 2,722,206 - -0.3 2,722,206 - -1.2 2,722,206 - +1.0 2,722,270 + +0.4 2,722,341 + +0.1 2,722,341 + +0.1 2,722,345 + +0.9 2,722,345 + +1.4 2,722,345 + +0.5 2,722,345 + -0.2
Or see this region's nucleotide sequence