Experiment: lib only
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_02369 and OHPLBJKB_02370 are separated by 30 nucleotides OHPLBJKB_02370 and OHPLBJKB_02371 overlap by 14 nucleotides OHPLBJKB_02371 and OHPLBJKB_02372 are separated by 20 nucleotides
OHPLBJKB_02369: OHPLBJKB_02369 - L-threonine 3-dehydrogenase, at 2,479,179 to 2,480,231
_02369
OHPLBJKB_02370: OHPLBJKB_02370 - Inner membrane ABC transporter permease protein YcjP, at 2,480,262 to 2,481,104
_02370
OHPLBJKB_02371: OHPLBJKB_02371 - Inner membrane ABC transporter permease protein YcjO, at 2,481,091 to 2,481,972
_02371
OHPLBJKB_02372: OHPLBJKB_02372 - hypothetical protein, at 2,481,993 to 2,483,285
_02372
Position (kb)
2481
2482 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2480.163 kb on + strand at 2480.233 kb on + strand at 2480.233 kb on + strand at 2480.234 kb on - strand at 2480.245 kb on + strand at 2480.300 kb on + strand at 2480.320 kb on + strand at 2480.321 kb on - strand at 2480.321 kb on - strand at 2480.321 kb on - strand at 2480.321 kb on - strand at 2480.324 kb on + strand at 2480.324 kb on + strand at 2480.324 kb on + strand at 2480.324 kb on + strand at 2480.324 kb on + strand at 2480.325 kb on - strand at 2480.325 kb on - strand at 2480.325 kb on - strand at 2480.325 kb on - strand at 2480.380 kb on + strand, within OHPLBJKB_02370 at 2480.380 kb on + strand, within OHPLBJKB_02370 at 2480.381 kb on - strand, within OHPLBJKB_02370 at 2480.381 kb on - strand, within OHPLBJKB_02370 at 2480.381 kb on - strand, within OHPLBJKB_02370 at 2480.484 kb on - strand, within OHPLBJKB_02370 at 2480.628 kb on - strand, within OHPLBJKB_02370 at 2480.689 kb on + strand, within OHPLBJKB_02370 at 2480.690 kb on - strand, within OHPLBJKB_02370 at 2480.750 kb on + strand, within OHPLBJKB_02370 at 2480.750 kb on + strand, within OHPLBJKB_02370 at 2480.750 kb on + strand, within OHPLBJKB_02370 at 2480.750 kb on + strand, within OHPLBJKB_02370 at 2480.750 kb on + strand, within OHPLBJKB_02370 at 2480.750 kb on + strand, within OHPLBJKB_02370 at 2480.750 kb on + strand, within OHPLBJKB_02370 at 2480.751 kb on - strand, within OHPLBJKB_02370 at 2480.751 kb on - strand, within OHPLBJKB_02370 at 2480.751 kb on - strand, within OHPLBJKB_02370 at 2480.751 kb on - strand, within OHPLBJKB_02370 at 2480.751 kb on - strand, within OHPLBJKB_02370 at 2480.751 kb on - strand, within OHPLBJKB_02370 at 2480.752 kb on + strand, within OHPLBJKB_02370 at 2480.752 kb on + strand, within OHPLBJKB_02370 at 2480.752 kb on + strand, within OHPLBJKB_02370 at 2480.752 kb on + strand, within OHPLBJKB_02370 at 2480.752 kb on + strand, within OHPLBJKB_02370 at 2480.752 kb on + strand, within OHPLBJKB_02370 at 2480.752 kb on + strand, within OHPLBJKB_02370 at 2480.752 kb on + strand, within OHPLBJKB_02370 at 2480.752 kb on + strand, within OHPLBJKB_02370 at 2480.752 kb on + strand, within OHPLBJKB_02370 at 2480.753 kb on - strand, within OHPLBJKB_02370 at 2480.753 kb on - strand, within OHPLBJKB_02370 at 2480.753 kb on - strand, within OHPLBJKB_02370 at 2480.753 kb on - strand, within OHPLBJKB_02370 at 2480.753 kb on - strand, within OHPLBJKB_02370 at 2480.753 kb on - strand, within OHPLBJKB_02370 at 2480.753 kb on - strand, within OHPLBJKB_02370 at 2480.753 kb on - strand, within OHPLBJKB_02370 at 2480.762 kb on - strand, within OHPLBJKB_02370 at 2480.792 kb on + strand, within OHPLBJKB_02370 at 2480.929 kb on + strand, within OHPLBJKB_02370 at 2480.930 kb on - strand, within OHPLBJKB_02370 at 2480.930 kb on - strand, within OHPLBJKB_02370 at 2480.930 kb on - strand, within OHPLBJKB_02370 at 2480.963 kb on + strand, within OHPLBJKB_02370 at 2480.964 kb on - strand, within OHPLBJKB_02370 at 2481.092 kb on + strand at 2481.222 kb on - strand, within OHPLBJKB_02371 at 2481.222 kb on - strand, within OHPLBJKB_02371 at 2481.222 kb on - strand, within OHPLBJKB_02371 at 2481.223 kb on + strand, within OHPLBJKB_02371 at 2481.223 kb on + strand, within OHPLBJKB_02371 at 2481.223 kb on + strand, within OHPLBJKB_02371 at 2481.223 kb on + strand, within OHPLBJKB_02371 at 2481.224 kb on - strand, within OHPLBJKB_02371 at 2481.224 kb on - strand, within OHPLBJKB_02371 at 2481.224 kb on - strand, within OHPLBJKB_02371 at 2481.224 kb on - strand, within OHPLBJKB_02371 at 2481.224 kb on - strand, within OHPLBJKB_02371 at 2481.224 kb on - strand, within OHPLBJKB_02371 at 2481.224 kb on - strand, within OHPLBJKB_02371 at 2481.224 kb on - strand, within OHPLBJKB_02371 at 2481.224 kb on - strand, within OHPLBJKB_02371 at 2481.224 kb on - strand, within OHPLBJKB_02371 at 2481.224 kb on - strand, within OHPLBJKB_02371 at 2481.224 kb on - strand, within OHPLBJKB_02371 at 2481.257 kb on + strand, within OHPLBJKB_02371 at 2481.258 kb on - strand, within OHPLBJKB_02371 at 2481.258 kb on - strand, within OHPLBJKB_02371 at 2481.276 kb on - strand, within OHPLBJKB_02371 at 2481.276 kb on - strand, within OHPLBJKB_02371 at 2481.276 kb on - strand, within OHPLBJKB_02371 at 2481.276 kb on - strand, within OHPLBJKB_02371 at 2481.325 kb on - strand, within OHPLBJKB_02371 at 2481.325 kb on - strand, within OHPLBJKB_02371 at 2481.325 kb on - strand, within OHPLBJKB_02371 at 2481.490 kb on - strand, within OHPLBJKB_02371 at 2481.490 kb on - strand, within OHPLBJKB_02371 at 2481.558 kb on + strand, within OHPLBJKB_02371 at 2481.559 kb on - strand, within OHPLBJKB_02371 at 2481.587 kb on + strand, within OHPLBJKB_02371 at 2481.622 kb on + strand, within OHPLBJKB_02371 at 2481.623 kb on - strand, within OHPLBJKB_02371 at 2481.623 kb on - strand, within OHPLBJKB_02371 at 2481.627 kb on - strand, within OHPLBJKB_02371 at 2481.627 kb on - strand, within OHPLBJKB_02371 at 2481.736 kb on - strand, within OHPLBJKB_02371 at 2481.794 kb on + strand, within OHPLBJKB_02371 at 2481.794 kb on + strand, within OHPLBJKB_02371 at 2481.795 kb on - strand, within OHPLBJKB_02371 at 2481.795 kb on - strand, within OHPLBJKB_02371 at 2481.795 kb on - strand, within OHPLBJKB_02371 at 2481.795 kb on - strand, within OHPLBJKB_02371 at 2481.795 kb on - strand, within OHPLBJKB_02371 at 2481.795 kb on - strand, within OHPLBJKB_02371 at 2481.795 kb on - strand, within OHPLBJKB_02371 at 2481.847 kb on + strand, within OHPLBJKB_02371 at 2481.847 kb on + strand, within OHPLBJKB_02371 at 2481.905 kb on - strand at 2481.907 kb on + strand at 2481.907 kb on + strand at 2482.043 kb on + strand at 2482.044 kb on - strand at 2482.044 kb on - strand at 2482.194 kb on + strand, within OHPLBJKB_02372 at 2482.211 kb on + strand, within OHPLBJKB_02372 at 2482.257 kb on - strand, within OHPLBJKB_02372 at 2482.402 kb on + strand, within OHPLBJKB_02372 at 2482.482 kb on - strand, within OHPLBJKB_02372 at 2482.483 kb on + strand, within OHPLBJKB_02372 at 2482.483 kb on + strand, within OHPLBJKB_02372 at 2482.483 kb on + strand, within OHPLBJKB_02372 at 2482.483 kb on + strand, within OHPLBJKB_02372 at 2482.483 kb on + strand, within OHPLBJKB_02372 at 2482.483 kb on + strand, within OHPLBJKB_02372 at 2482.483 kb on + strand, within OHPLBJKB_02372 at 2482.483 kb on + strand, within OHPLBJKB_02372 at 2482.483 kb on + strand, within OHPLBJKB_02372 at 2482.483 kb on + strand, within OHPLBJKB_02372 at 2482.484 kb on - strand, within OHPLBJKB_02372 at 2482.484 kb on - strand, within OHPLBJKB_02372 at 2482.484 kb on - strand, within OHPLBJKB_02372 at 2482.484 kb on - strand, within OHPLBJKB_02372 at 2482.484 kb on - strand, within OHPLBJKB_02372 at 2482.484 kb on - strand, within OHPLBJKB_02372 at 2482.484 kb on - strand, within OHPLBJKB_02372 at 2482.521 kb on - strand, within OHPLBJKB_02372 at 2482.551 kb on - strand, within OHPLBJKB_02372 at 2482.562 kb on + strand, within OHPLBJKB_02372 at 2482.562 kb on + strand, within OHPLBJKB_02372 at 2482.563 kb on - strand, within OHPLBJKB_02372 at 2482.586 kb on - strand, within OHPLBJKB_02372 at 2482.588 kb on + strand, within OHPLBJKB_02372 at 2482.589 kb on - strand, within OHPLBJKB_02372 at 2482.589 kb on - strand, within OHPLBJKB_02372 at 2482.616 kb on + strand, within OHPLBJKB_02372 at 2482.616 kb on + strand, within OHPLBJKB_02372 at 2482.730 kb on - strand, within OHPLBJKB_02372 at 2482.901 kb on + strand, within OHPLBJKB_02372
Per-strain Table
Position Strand Gene LocusTag Fraction lib only remove 2,480,163 + -1.2 2,480,233 + -1.4 2,480,233 + +0.1 2,480,234 - +0.2 2,480,245 + -0.2 2,480,300 + -1.0 2,480,320 + -0.0 2,480,321 - +0.4 2,480,321 - +0.9 2,480,321 - +0.3 2,480,321 - +0.8 2,480,324 + -0.2 2,480,324 + -0.9 2,480,324 + +0.2 2,480,324 + -1.0 2,480,324 + +0.4 2,480,325 - -0.5 2,480,325 - +0.1 2,480,325 - +1.4 2,480,325 - +0.3 2,480,380 + OHPLBJKB_02370 0.14 +0.5 2,480,380 + OHPLBJKB_02370 0.14 +0.1 2,480,381 - OHPLBJKB_02370 0.14 -0.0 2,480,381 - OHPLBJKB_02370 0.14 -0.2 2,480,381 - OHPLBJKB_02370 0.14 -0.2 2,480,484 - OHPLBJKB_02370 0.26 -1.0 2,480,628 - OHPLBJKB_02370 0.43 +0.1 2,480,689 + OHPLBJKB_02370 0.51 +1.5 2,480,690 - OHPLBJKB_02370 0.51 +1.4 2,480,750 + OHPLBJKB_02370 0.58 -0.3 2,480,750 + OHPLBJKB_02370 0.58 +1.1 2,480,750 + OHPLBJKB_02370 0.58 -0.7 2,480,750 + OHPLBJKB_02370 0.58 -0.3 2,480,750 + OHPLBJKB_02370 0.58 +1.5 2,480,750 + OHPLBJKB_02370 0.58 -0.2 2,480,750 + OHPLBJKB_02370 0.58 -0.3 2,480,751 - OHPLBJKB_02370 0.58 +0.9 2,480,751 - OHPLBJKB_02370 0.58 +0.1 2,480,751 - OHPLBJKB_02370 0.58 -0.1 2,480,751 - OHPLBJKB_02370 0.58 +0.0 2,480,751 - OHPLBJKB_02370 0.58 +0.2 2,480,751 - OHPLBJKB_02370 0.58 -0.7 2,480,752 + OHPLBJKB_02370 0.58 -0.9 2,480,752 + OHPLBJKB_02370 0.58 -0.7 2,480,752 + OHPLBJKB_02370 0.58 +1.0 2,480,752 + OHPLBJKB_02370 0.58 +0.2 2,480,752 + OHPLBJKB_02370 0.58 +2.5 2,480,752 + OHPLBJKB_02370 0.58 -0.3 2,480,752 + OHPLBJKB_02370 0.58 -0.4 2,480,752 + OHPLBJKB_02370 0.58 -1.8 2,480,752 + OHPLBJKB_02370 0.58 +0.0 2,480,752 + OHPLBJKB_02370 0.58 -0.7 2,480,753 - OHPLBJKB_02370 0.58 +0.4 2,480,753 - OHPLBJKB_02370 0.58 -0.5 2,480,753 - OHPLBJKB_02370 0.58 -0.4 2,480,753 - OHPLBJKB_02370 0.58 +1.5 2,480,753 - OHPLBJKB_02370 0.58 -0.5 2,480,753 - OHPLBJKB_02370 0.58 +0.4 2,480,753 - OHPLBJKB_02370 0.58 +1.9 2,480,753 - OHPLBJKB_02370 0.58 +0.1 2,480,762 - OHPLBJKB_02370 0.59 +0.0 2,480,792 + OHPLBJKB_02370 0.63 -0.5 2,480,929 + OHPLBJKB_02370 0.79 +0.7 2,480,930 - OHPLBJKB_02370 0.79 -0.5 2,480,930 - OHPLBJKB_02370 0.79 +0.3 2,480,930 - OHPLBJKB_02370 0.79 -0.3 2,480,963 + OHPLBJKB_02370 0.83 -0.0 2,480,964 - OHPLBJKB_02370 0.83 +0.1 2,481,092 + +0.9 2,481,222 - OHPLBJKB_02371 0.15 -1.2 2,481,222 - OHPLBJKB_02371 0.15 -0.8 2,481,222 - OHPLBJKB_02371 0.15 -0.0 2,481,223 + OHPLBJKB_02371 0.15 +0.1 2,481,223 + OHPLBJKB_02371 0.15 +0.4 2,481,223 + OHPLBJKB_02371 0.15 -0.6 2,481,223 + OHPLBJKB_02371 0.15 +0.1 2,481,224 - OHPLBJKB_02371 0.15 +0.5 2,481,224 - OHPLBJKB_02371 0.15 +0.4 2,481,224 - OHPLBJKB_02371 0.15 -0.5 2,481,224 - OHPLBJKB_02371 0.15 +0.2 2,481,224 - OHPLBJKB_02371 0.15 +0.4 2,481,224 - OHPLBJKB_02371 0.15 -0.8 2,481,224 - OHPLBJKB_02371 0.15 +0.3 2,481,224 - OHPLBJKB_02371 0.15 -0.1 2,481,224 - OHPLBJKB_02371 0.15 +0.4 2,481,224 - OHPLBJKB_02371 0.15 +0.3 2,481,224 - OHPLBJKB_02371 0.15 +0.4 2,481,224 - OHPLBJKB_02371 0.15 +1.0 2,481,257 + OHPLBJKB_02371 0.19 +0.3 2,481,258 - OHPLBJKB_02371 0.19 -0.9 2,481,258 - OHPLBJKB_02371 0.19 -0.3 2,481,276 - OHPLBJKB_02371 0.21 -0.5 2,481,276 - OHPLBJKB_02371 0.21 +1.1 2,481,276 - OHPLBJKB_02371 0.21 +0.7 2,481,276 - OHPLBJKB_02371 0.21 +1.3 2,481,325 - OHPLBJKB_02371 0.27 -1.1 2,481,325 - OHPLBJKB_02371 0.27 +0.1 2,481,325 - OHPLBJKB_02371 0.27 -0.4 2,481,490 - OHPLBJKB_02371 0.45 +0.2 2,481,490 - OHPLBJKB_02371 0.45 +1.1 2,481,558 + OHPLBJKB_02371 0.53 +0.8 2,481,559 - OHPLBJKB_02371 0.53 -0.1 2,481,587 + OHPLBJKB_02371 0.56 +0.0 2,481,622 + OHPLBJKB_02371 0.60 -0.0 2,481,623 - OHPLBJKB_02371 0.60 +0.3 2,481,623 - OHPLBJKB_02371 0.60 -2.0 2,481,627 - OHPLBJKB_02371 0.61 +0.9 2,481,627 - OHPLBJKB_02371 0.61 +0.1 2,481,736 - OHPLBJKB_02371 0.73 -0.7 2,481,794 + OHPLBJKB_02371 0.80 -0.7 2,481,794 + OHPLBJKB_02371 0.80 -0.4 2,481,795 - OHPLBJKB_02371 0.80 -0.6 2,481,795 - OHPLBJKB_02371 0.80 -1.2 2,481,795 - OHPLBJKB_02371 0.80 -0.2 2,481,795 - OHPLBJKB_02371 0.80 -0.5 2,481,795 - OHPLBJKB_02371 0.80 +0.1 2,481,795 - OHPLBJKB_02371 0.80 -0.1 2,481,795 - OHPLBJKB_02371 0.80 +0.1 2,481,847 + OHPLBJKB_02371 0.86 -0.1 2,481,847 + OHPLBJKB_02371 0.86 -0.1 2,481,905 - -0.5 2,481,907 + -0.1 2,481,907 + +0.5 2,482,043 + -0.1 2,482,044 - -0.8 2,482,044 - +0.5 2,482,194 + OHPLBJKB_02372 0.16 +0.7 2,482,211 + OHPLBJKB_02372 0.17 +2.1 2,482,257 - OHPLBJKB_02372 0.20 +0.0 2,482,402 + OHPLBJKB_02372 0.32 +0.8 2,482,482 - OHPLBJKB_02372 0.38 +0.5 2,482,483 + OHPLBJKB_02372 0.38 -0.6 2,482,483 + OHPLBJKB_02372 0.38 -0.4 2,482,483 + OHPLBJKB_02372 0.38 +0.2 2,482,483 + OHPLBJKB_02372 0.38 +1.1 2,482,483 + OHPLBJKB_02372 0.38 +2.1 2,482,483 + OHPLBJKB_02372 0.38 -0.5 2,482,483 + OHPLBJKB_02372 0.38 -0.6 2,482,483 + OHPLBJKB_02372 0.38 -1.5 2,482,483 + OHPLBJKB_02372 0.38 -0.5 2,482,483 + OHPLBJKB_02372 0.38 -1.0 2,482,484 - OHPLBJKB_02372 0.38 -0.8 2,482,484 - OHPLBJKB_02372 0.38 -0.9 2,482,484 - OHPLBJKB_02372 0.38 +1.6 2,482,484 - OHPLBJKB_02372 0.38 -0.7 2,482,484 - OHPLBJKB_02372 0.38 -0.4 2,482,484 - OHPLBJKB_02372 0.38 -0.2 2,482,484 - OHPLBJKB_02372 0.38 +0.1 2,482,521 - OHPLBJKB_02372 0.41 +0.0 2,482,551 - OHPLBJKB_02372 0.43 -0.4 2,482,562 + OHPLBJKB_02372 0.44 +1.3 2,482,562 + OHPLBJKB_02372 0.44 -0.8 2,482,563 - OHPLBJKB_02372 0.44 +0.4 2,482,586 - OHPLBJKB_02372 0.46 +1.0 2,482,588 + OHPLBJKB_02372 0.46 -1.3 2,482,589 - OHPLBJKB_02372 0.46 +0.5 2,482,589 - OHPLBJKB_02372 0.46 +0.2 2,482,616 + OHPLBJKB_02372 0.48 -0.4 2,482,616 + OHPLBJKB_02372 0.48 +0.5 2,482,730 - OHPLBJKB_02372 0.57 -0.6 2,482,901 + OHPLBJKB_02372 0.70 +0.7
Or see this region's nucleotide sequence