Experiment: lib only
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_01741 and OHPLBJKB_01742 overlap by 1 nucleotides OHPLBJKB_01742 and OHPLBJKB_01743 overlap by 41 nucleotides OHPLBJKB_01743 and OHPLBJKB_01744 overlap by 4 nucleotides
OHPLBJKB_01741: OHPLBJKB_01741 - hypothetical protein, at 1,835,439 to 1,836,029
_01741
OHPLBJKB_01742: OHPLBJKB_01742 - hypothetical protein, at 1,836,029 to 1,836,538
_01742
OHPLBJKB_01743: OHPLBJKB_01743 - hypothetical protein, at 1,836,498 to 1,836,848
_01743
OHPLBJKB_01744: OHPLBJKB_01744 - hypothetical protein, at 1,836,845 to 1,837,930
_01744
Position (kb)
1836
1837 Strain fitness (log2 ratio)
-2
-1
0
1 at 1835.768 kb on + strand, within OHPLBJKB_01741 at 1835.768 kb on + strand, within OHPLBJKB_01741 at 1835.831 kb on + strand, within OHPLBJKB_01741 at 1835.969 kb on + strand, within OHPLBJKB_01741 at 1835.984 kb on - strand at 1836.004 kb on - strand at 1836.152 kb on + strand, within OHPLBJKB_01742 at 1836.153 kb on - strand, within OHPLBJKB_01742 at 1836.153 kb on - strand, within OHPLBJKB_01742 at 1836.197 kb on + strand, within OHPLBJKB_01742 at 1836.199 kb on + strand, within OHPLBJKB_01742 at 1836.332 kb on - strand, within OHPLBJKB_01742 at 1836.378 kb on + strand, within OHPLBJKB_01742 at 1836.378 kb on + strand, within OHPLBJKB_01742 at 1836.378 kb on + strand, within OHPLBJKB_01742 at 1836.378 kb on + strand, within OHPLBJKB_01742 at 1836.379 kb on - strand, within OHPLBJKB_01742 at 1836.379 kb on - strand, within OHPLBJKB_01742 at 1836.379 kb on - strand, within OHPLBJKB_01742 at 1836.484 kb on + strand, within OHPLBJKB_01742 at 1836.484 kb on + strand, within OHPLBJKB_01742 at 1836.484 kb on + strand, within OHPLBJKB_01742 at 1836.484 kb on + strand, within OHPLBJKB_01742 at 1836.484 kb on + strand, within OHPLBJKB_01742 at 1836.484 kb on + strand, within OHPLBJKB_01742 at 1836.485 kb on - strand, within OHPLBJKB_01742 at 1836.485 kb on - strand, within OHPLBJKB_01742 at 1836.485 kb on - strand, within OHPLBJKB_01742 at 1836.485 kb on - strand, within OHPLBJKB_01742 at 1836.488 kb on + strand at 1836.519 kb on + strand at 1836.592 kb on + strand, within OHPLBJKB_01743 at 1836.593 kb on - strand, within OHPLBJKB_01743 at 1836.624 kb on + strand, within OHPLBJKB_01743 at 1836.753 kb on + strand, within OHPLBJKB_01743 at 1836.784 kb on + strand, within OHPLBJKB_01743 at 1836.977 kb on + strand, within OHPLBJKB_01744 at 1837.009 kb on - strand, within OHPLBJKB_01744 at 1837.088 kb on - strand, within OHPLBJKB_01744 at 1837.088 kb on - strand, within OHPLBJKB_01744 at 1837.171 kb on + strand, within OHPLBJKB_01744 at 1837.171 kb on + strand, within OHPLBJKB_01744 at 1837.189 kb on + strand, within OHPLBJKB_01744 at 1837.202 kb on - strand, within OHPLBJKB_01744 at 1837.203 kb on + strand, within OHPLBJKB_01744 at 1837.204 kb on - strand, within OHPLBJKB_01744 at 1837.204 kb on - strand, within OHPLBJKB_01744 at 1837.226 kb on + strand, within OHPLBJKB_01744 at 1837.239 kb on + strand, within OHPLBJKB_01744 at 1837.243 kb on + strand, within OHPLBJKB_01744 at 1837.244 kb on - strand, within OHPLBJKB_01744 at 1837.312 kb on - strand, within OHPLBJKB_01744 at 1837.349 kb on + strand, within OHPLBJKB_01744 at 1837.371 kb on + strand, within OHPLBJKB_01744 at 1837.371 kb on + strand, within OHPLBJKB_01744 at 1837.372 kb on - strand, within OHPLBJKB_01744 at 1837.372 kb on - strand, within OHPLBJKB_01744 at 1837.372 kb on - strand, within OHPLBJKB_01744 at 1837.582 kb on + strand, within OHPLBJKB_01744 at 1837.738 kb on - strand, within OHPLBJKB_01744 at 1837.756 kb on + strand, within OHPLBJKB_01744 at 1837.820 kb on + strand, within OHPLBJKB_01744 at 1837.820 kb on + strand, within OHPLBJKB_01744 at 1837.821 kb on - strand, within OHPLBJKB_01744 at 1837.821 kb on - strand, within OHPLBJKB_01744 at 1837.822 kb on + strand at 1837.822 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction lib only remove 1,835,768 + OHPLBJKB_01741 0.56 +0.4 1,835,768 + OHPLBJKB_01741 0.56 +0.9 1,835,831 + OHPLBJKB_01741 0.66 +0.5 1,835,969 + OHPLBJKB_01741 0.90 -0.3 1,835,984 - -0.3 1,836,004 - -2.3 1,836,152 + OHPLBJKB_01742 0.24 +0.7 1,836,153 - OHPLBJKB_01742 0.24 +0.8 1,836,153 - OHPLBJKB_01742 0.24 -0.2 1,836,197 + OHPLBJKB_01742 0.33 +0.1 1,836,199 + OHPLBJKB_01742 0.33 -2.0 1,836,332 - OHPLBJKB_01742 0.59 +0.3 1,836,378 + OHPLBJKB_01742 0.68 -1.3 1,836,378 + OHPLBJKB_01742 0.68 -0.7 1,836,378 + OHPLBJKB_01742 0.68 -0.3 1,836,378 + OHPLBJKB_01742 0.68 -1.1 1,836,379 - OHPLBJKB_01742 0.69 -0.3 1,836,379 - OHPLBJKB_01742 0.69 -0.4 1,836,379 - OHPLBJKB_01742 0.69 +0.3 1,836,484 + OHPLBJKB_01742 0.89 +0.0 1,836,484 + OHPLBJKB_01742 0.89 +0.0 1,836,484 + OHPLBJKB_01742 0.89 +0.1 1,836,484 + OHPLBJKB_01742 0.89 -0.3 1,836,484 + OHPLBJKB_01742 0.89 -0.2 1,836,484 + OHPLBJKB_01742 0.89 -0.4 1,836,485 - OHPLBJKB_01742 0.89 +0.1 1,836,485 - OHPLBJKB_01742 0.89 +0.7 1,836,485 - OHPLBJKB_01742 0.89 +0.1 1,836,485 - OHPLBJKB_01742 0.89 -0.1 1,836,488 + +1.1 1,836,519 + -0.1 1,836,592 + OHPLBJKB_01743 0.27 +0.7 1,836,593 - OHPLBJKB_01743 0.27 +0.4 1,836,624 + OHPLBJKB_01743 0.36 +0.3 1,836,753 + OHPLBJKB_01743 0.73 +0.7 1,836,784 + OHPLBJKB_01743 0.81 +0.5 1,836,977 + OHPLBJKB_01744 0.12 -1.6 1,837,009 - OHPLBJKB_01744 0.15 -0.6 1,837,088 - OHPLBJKB_01744 0.22 +0.4 1,837,088 - OHPLBJKB_01744 0.22 -0.7 1,837,171 + OHPLBJKB_01744 0.30 +0.3 1,837,171 + OHPLBJKB_01744 0.30 +0.8 1,837,189 + OHPLBJKB_01744 0.32 +0.8 1,837,202 - OHPLBJKB_01744 0.33 -0.0 1,837,203 + OHPLBJKB_01744 0.33 -1.0 1,837,204 - OHPLBJKB_01744 0.33 -1.0 1,837,204 - OHPLBJKB_01744 0.33 -0.2 1,837,226 + OHPLBJKB_01744 0.35 -0.1 1,837,239 + OHPLBJKB_01744 0.36 +0.4 1,837,243 + OHPLBJKB_01744 0.37 +0.5 1,837,244 - OHPLBJKB_01744 0.37 -0.0 1,837,312 - OHPLBJKB_01744 0.43 +0.0 1,837,349 + OHPLBJKB_01744 0.46 -0.5 1,837,371 + OHPLBJKB_01744 0.48 +0.7 1,837,371 + OHPLBJKB_01744 0.48 +0.6 1,837,372 - OHPLBJKB_01744 0.49 +0.7 1,837,372 - OHPLBJKB_01744 0.49 -0.0 1,837,372 - OHPLBJKB_01744 0.49 +0.3 1,837,582 + OHPLBJKB_01744 0.68 -0.1 1,837,738 - OHPLBJKB_01744 0.82 +0.4 1,837,756 + OHPLBJKB_01744 0.84 -0.6 1,837,820 + OHPLBJKB_01744 0.90 -0.1 1,837,820 + OHPLBJKB_01744 0.90 +0.3 1,837,821 - OHPLBJKB_01744 0.90 -0.8 1,837,821 - OHPLBJKB_01744 0.90 -0.8 1,837,822 + -0.1 1,837,822 + +0.8
Or see this region's nucleotide sequence