Experiment: lib only
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_01348 and OHPLBJKB_01349 are separated by 69 nucleotides OHPLBJKB_01349 and OHPLBJKB_01350 are separated by 73 nucleotides
OHPLBJKB_01348: OHPLBJKB_01348 - Oxalyl-CoA decarboxylase, at 1,387,271 to 1,388,965
_01348
OHPLBJKB_01349: OHPLBJKB_01349 - hypothetical protein, at 1,389,035 to 1,389,979
_01349
OHPLBJKB_01350: OHPLBJKB_01350 - Acetyl-CoA:oxalate CoA-transferase, at 1,390,053 to 1,391,198
_01350
Position (kb)
1389
1390 Strain fitness (log2 ratio)
-2
-1
0
1 at 1388.156 kb on - strand, within OHPLBJKB_01348 at 1388.245 kb on + strand, within OHPLBJKB_01348 at 1388.254 kb on + strand, within OHPLBJKB_01348 at 1388.254 kb on + strand, within OHPLBJKB_01348 at 1388.255 kb on - strand, within OHPLBJKB_01348 at 1388.491 kb on + strand, within OHPLBJKB_01348 at 1388.491 kb on + strand, within OHPLBJKB_01348 at 1388.491 kb on + strand, within OHPLBJKB_01348 at 1388.492 kb on - strand, within OHPLBJKB_01348 at 1388.495 kb on + strand, within OHPLBJKB_01348 at 1388.496 kb on - strand, within OHPLBJKB_01348 at 1388.497 kb on + strand, within OHPLBJKB_01348 at 1388.524 kb on + strand, within OHPLBJKB_01348 at 1388.658 kb on - strand, within OHPLBJKB_01348 at 1388.658 kb on - strand, within OHPLBJKB_01348 at 1388.680 kb on + strand, within OHPLBJKB_01348 at 1388.702 kb on + strand, within OHPLBJKB_01348 at 1388.702 kb on + strand, within OHPLBJKB_01348 at 1388.702 kb on + strand, within OHPLBJKB_01348 at 1388.703 kb on - strand, within OHPLBJKB_01348 at 1388.775 kb on - strand, within OHPLBJKB_01348 at 1388.785 kb on - strand, within OHPLBJKB_01348 at 1388.926 kb on + strand at 1389.243 kb on + strand, within OHPLBJKB_01349 at 1389.339 kb on + strand, within OHPLBJKB_01349 at 1389.356 kb on - strand, within OHPLBJKB_01349 at 1389.427 kb on - strand, within OHPLBJKB_01349 at 1389.458 kb on - strand, within OHPLBJKB_01349 at 1389.517 kb on + strand, within OHPLBJKB_01349 at 1389.518 kb on - strand, within OHPLBJKB_01349 at 1389.729 kb on - strand, within OHPLBJKB_01349 at 1389.729 kb on - strand, within OHPLBJKB_01349 at 1389.730 kb on + strand, within OHPLBJKB_01349 at 1389.731 kb on - strand, within OHPLBJKB_01349 at 1389.731 kb on - strand, within OHPLBJKB_01349 at 1389.731 kb on - strand, within OHPLBJKB_01349 at 1389.822 kb on + strand, within OHPLBJKB_01349 at 1389.884 kb on + strand, within OHPLBJKB_01349 at 1389.884 kb on + strand, within OHPLBJKB_01349 at 1389.885 kb on - strand at 1389.977 kb on + strand at 1389.978 kb on - strand at 1389.982 kb on - strand at 1390.046 kb on + strand at 1390.047 kb on - strand at 1390.062 kb on - strand at 1390.093 kb on + strand at 1390.093 kb on + strand at 1390.149 kb on - strand at 1390.149 kb on - strand at 1390.149 kb on - strand at 1390.218 kb on + strand, within OHPLBJKB_01350 at 1390.219 kb on - strand, within OHPLBJKB_01350 at 1390.310 kb on - strand, within OHPLBJKB_01350 at 1390.316 kb on - strand, within OHPLBJKB_01350 at 1390.342 kb on + strand, within OHPLBJKB_01350 at 1390.423 kb on + strand, within OHPLBJKB_01350 at 1390.423 kb on + strand, within OHPLBJKB_01350 at 1390.424 kb on - strand, within OHPLBJKB_01350 at 1390.424 kb on - strand, within OHPLBJKB_01350 at 1390.425 kb on + strand, within OHPLBJKB_01350 at 1390.426 kb on - strand, within OHPLBJKB_01350 at 1390.426 kb on - strand, within OHPLBJKB_01350 at 1390.426 kb on - strand, within OHPLBJKB_01350 at 1390.426 kb on - strand, within OHPLBJKB_01350 at 1390.556 kb on + strand, within OHPLBJKB_01350 at 1390.574 kb on - strand, within OHPLBJKB_01350 at 1390.618 kb on - strand, within OHPLBJKB_01350 at 1390.657 kb on + strand, within OHPLBJKB_01350 at 1390.658 kb on - strand, within OHPLBJKB_01350 at 1390.707 kb on + strand, within OHPLBJKB_01350 at 1390.708 kb on - strand, within OHPLBJKB_01350 at 1390.708 kb on - strand, within OHPLBJKB_01350 at 1390.709 kb on + strand, within OHPLBJKB_01350 at 1390.710 kb on - strand, within OHPLBJKB_01350 at 1390.755 kb on + strand, within OHPLBJKB_01350 at 1390.755 kb on + strand, within OHPLBJKB_01350 at 1390.755 kb on + strand, within OHPLBJKB_01350 at 1390.755 kb on + strand, within OHPLBJKB_01350 at 1390.756 kb on - strand, within OHPLBJKB_01350 at 1390.930 kb on - strand, within OHPLBJKB_01350
Per-strain Table
Position Strand Gene LocusTag Fraction lib only remove 1,388,156 - OHPLBJKB_01348 0.52 +0.2 1,388,245 + OHPLBJKB_01348 0.57 -0.4 1,388,254 + OHPLBJKB_01348 0.58 -0.2 1,388,254 + OHPLBJKB_01348 0.58 +0.2 1,388,255 - OHPLBJKB_01348 0.58 -1.4 1,388,491 + OHPLBJKB_01348 0.72 -0.8 1,388,491 + OHPLBJKB_01348 0.72 -0.6 1,388,491 + OHPLBJKB_01348 0.72 -0.2 1,388,492 - OHPLBJKB_01348 0.72 +0.5 1,388,495 + OHPLBJKB_01348 0.72 +1.0 1,388,496 - OHPLBJKB_01348 0.72 -0.2 1,388,497 + OHPLBJKB_01348 0.72 -0.6 1,388,524 + OHPLBJKB_01348 0.74 +1.5 1,388,658 - OHPLBJKB_01348 0.82 -0.3 1,388,658 - OHPLBJKB_01348 0.82 -0.5 1,388,680 + OHPLBJKB_01348 0.83 +0.2 1,388,702 + OHPLBJKB_01348 0.84 -0.4 1,388,702 + OHPLBJKB_01348 0.84 -0.5 1,388,702 + OHPLBJKB_01348 0.84 +0.8 1,388,703 - OHPLBJKB_01348 0.84 +0.7 1,388,775 - OHPLBJKB_01348 0.89 -0.0 1,388,785 - OHPLBJKB_01348 0.89 -0.3 1,388,926 + -0.1 1,389,243 + OHPLBJKB_01349 0.22 -1.1 1,389,339 + OHPLBJKB_01349 0.32 +0.1 1,389,356 - OHPLBJKB_01349 0.34 -0.6 1,389,427 - OHPLBJKB_01349 0.41 -1.2 1,389,458 - OHPLBJKB_01349 0.45 +0.5 1,389,517 + OHPLBJKB_01349 0.51 -0.7 1,389,518 - OHPLBJKB_01349 0.51 -0.9 1,389,729 - OHPLBJKB_01349 0.73 +0.2 1,389,729 - OHPLBJKB_01349 0.73 +0.1 1,389,730 + OHPLBJKB_01349 0.74 +0.2 1,389,731 - OHPLBJKB_01349 0.74 -0.1 1,389,731 - OHPLBJKB_01349 0.74 +0.0 1,389,731 - OHPLBJKB_01349 0.74 +0.6 1,389,822 + OHPLBJKB_01349 0.83 -0.4 1,389,884 + OHPLBJKB_01349 0.90 -1.3 1,389,884 + OHPLBJKB_01349 0.90 -0.5 1,389,885 - -0.3 1,389,977 + +0.2 1,389,978 - -0.6 1,389,982 - -1.2 1,390,046 + -0.7 1,390,047 - -0.2 1,390,062 - +1.4 1,390,093 + -0.4 1,390,093 + +1.4 1,390,149 - -0.3 1,390,149 - +0.5 1,390,149 - -0.0 1,390,218 + OHPLBJKB_01350 0.14 -0.5 1,390,219 - OHPLBJKB_01350 0.14 -0.3 1,390,310 - OHPLBJKB_01350 0.22 +1.3 1,390,316 - OHPLBJKB_01350 0.23 -0.6 1,390,342 + OHPLBJKB_01350 0.25 -0.9 1,390,423 + OHPLBJKB_01350 0.32 -1.0 1,390,423 + OHPLBJKB_01350 0.32 +0.2 1,390,424 - OHPLBJKB_01350 0.32 +0.7 1,390,424 - OHPLBJKB_01350 0.32 -0.3 1,390,425 + OHPLBJKB_01350 0.32 -0.9 1,390,426 - OHPLBJKB_01350 0.33 -0.8 1,390,426 - OHPLBJKB_01350 0.33 -1.4 1,390,426 - OHPLBJKB_01350 0.33 +0.5 1,390,426 - OHPLBJKB_01350 0.33 -0.8 1,390,556 + OHPLBJKB_01350 0.44 +0.4 1,390,574 - OHPLBJKB_01350 0.45 -1.4 1,390,618 - OHPLBJKB_01350 0.49 -0.1 1,390,657 + OHPLBJKB_01350 0.53 +0.2 1,390,658 - OHPLBJKB_01350 0.53 -1.8 1,390,707 + OHPLBJKB_01350 0.57 +0.7 1,390,708 - OHPLBJKB_01350 0.57 -0.1 1,390,708 - OHPLBJKB_01350 0.57 +0.3 1,390,709 + OHPLBJKB_01350 0.57 +0.4 1,390,710 - OHPLBJKB_01350 0.57 -0.9 1,390,755 + OHPLBJKB_01350 0.61 -0.6 1,390,755 + OHPLBJKB_01350 0.61 -0.4 1,390,755 + OHPLBJKB_01350 0.61 +0.1 1,390,755 + OHPLBJKB_01350 0.61 -1.0 1,390,756 - OHPLBJKB_01350 0.61 -0.0 1,390,930 - OHPLBJKB_01350 0.77 -0.0
Or see this region's nucleotide sequence