Experiment: lib only
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_00151 and OHPLBJKB_00152 are separated by 433 nucleotides OHPLBJKB_00152 and OHPLBJKB_00153 are separated by 49 nucleotides
OHPLBJKB_00151: OHPLBJKB_00151 - hypothetical protein, at 161,830 to 162,120
_00151
OHPLBJKB_00152: OHPLBJKB_00152 - hypothetical protein, at 162,554 to 163,264
_00152
OHPLBJKB_00153: OHPLBJKB_00153 - Glyoxylate/hydroxypyruvate reductase B, at 163,314 to 164,288
_00153
Position (kb) 162
163
164 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 161.554 kb on + strand at 161.554 kb on + strand at 161.554 kb on + strand at 161.555 kb on - strand at 161.555 kb on - strand at 161.557 kb on + strand at 161.557 kb on + strand at 161.558 kb on - strand at 161.558 kb on - strand at 161.567 kb on - strand at 161.570 kb on + strand at 161.570 kb on + strand at 161.570 kb on + strand at 161.570 kb on + strand at 161.570 kb on + strand at 161.570 kb on + strand at 161.571 kb on - strand at 161.571 kb on - strand at 161.571 kb on - strand at 161.571 kb on - strand at 161.677 kb on - strand at 161.677 kb on - strand at 161.677 kb on - strand at 161.677 kb on - strand at 161.763 kb on + strand at 161.848 kb on - strand at 161.852 kb on - strand at 161.887 kb on + strand, within OHPLBJKB_00151 at 161.887 kb on + strand, within OHPLBJKB_00151 at 161.887 kb on + strand, within OHPLBJKB_00151 at 161.887 kb on + strand, within OHPLBJKB_00151 at 161.888 kb on - strand, within OHPLBJKB_00151 at 161.933 kb on - strand, within OHPLBJKB_00151 at 162.111 kb on + strand at 162.111 kb on + strand at 162.112 kb on - strand at 162.112 kb on - strand at 162.112 kb on - strand at 162.179 kb on - strand at 162.179 kb on - strand at 162.227 kb on + strand at 162.251 kb on + strand at 162.261 kb on + strand at 162.261 kb on + strand at 162.261 kb on + strand at 162.261 kb on + strand at 162.262 kb on - strand at 162.263 kb on + strand at 162.264 kb on - strand at 162.271 kb on + strand at 162.272 kb on - strand at 162.292 kb on + strand at 162.294 kb on + strand at 162.294 kb on + strand at 162.294 kb on + strand at 162.294 kb on + strand at 162.294 kb on + strand at 162.294 kb on + strand at 162.294 kb on + strand at 162.295 kb on - strand at 162.295 kb on - strand at 162.295 kb on - strand at 162.334 kb on + strand at 162.335 kb on - strand at 162.364 kb on + strand at 162.453 kb on + strand at 162.453 kb on + strand at 162.454 kb on - strand at 162.454 kb on - strand at 162.457 kb on + strand at 162.457 kb on + strand at 162.457 kb on + strand at 162.458 kb on - strand at 162.490 kb on - strand at 162.607 kb on - strand at 162.612 kb on + strand at 162.612 kb on + strand at 162.612 kb on + strand at 162.612 kb on + strand at 162.612 kb on + strand at 162.612 kb on + strand at 162.612 kb on + strand at 162.613 kb on - strand at 162.613 kb on - strand at 162.656 kb on - strand, within OHPLBJKB_00152 at 162.682 kb on + strand, within OHPLBJKB_00152 at 162.682 kb on + strand, within OHPLBJKB_00152 at 162.683 kb on - strand, within OHPLBJKB_00152 at 162.683 kb on - strand, within OHPLBJKB_00152 at 162.683 kb on - strand, within OHPLBJKB_00152 at 162.709 kb on - strand, within OHPLBJKB_00152 at 162.762 kb on - strand, within OHPLBJKB_00152 at 162.773 kb on + strand, within OHPLBJKB_00152 at 162.773 kb on + strand, within OHPLBJKB_00152 at 162.774 kb on - strand, within OHPLBJKB_00152 at 162.828 kb on + strand, within OHPLBJKB_00152 at 162.829 kb on - strand, within OHPLBJKB_00152 at 162.863 kb on + strand, within OHPLBJKB_00152 at 162.863 kb on + strand, within OHPLBJKB_00152 at 162.864 kb on - strand, within OHPLBJKB_00152 at 163.103 kb on + strand, within OHPLBJKB_00152 at 163.103 kb on + strand, within OHPLBJKB_00152 at 163.104 kb on - strand, within OHPLBJKB_00152 at 163.104 kb on - strand, within OHPLBJKB_00152 at 163.104 kb on - strand, within OHPLBJKB_00152 at 163.104 kb on - strand, within OHPLBJKB_00152 at 163.104 kb on - strand, within OHPLBJKB_00152 at 163.104 kb on - strand, within OHPLBJKB_00152 at 163.120 kb on + strand, within OHPLBJKB_00152 at 163.181 kb on + strand, within OHPLBJKB_00152 at 163.181 kb on + strand, within OHPLBJKB_00152 at 163.181 kb on + strand, within OHPLBJKB_00152 at 163.181 kb on + strand, within OHPLBJKB_00152 at 163.182 kb on - strand, within OHPLBJKB_00152 at 163.182 kb on - strand, within OHPLBJKB_00152 at 163.182 kb on - strand, within OHPLBJKB_00152 at 163.183 kb on + strand, within OHPLBJKB_00152 at 163.183 kb on + strand, within OHPLBJKB_00152 at 163.183 kb on + strand, within OHPLBJKB_00152 at 163.183 kb on + strand, within OHPLBJKB_00152 at 163.183 kb on + strand, within OHPLBJKB_00152 at 163.240 kb on + strand at 163.241 kb on - strand at 163.249 kb on + strand at 163.270 kb on - strand at 163.270 kb on - strand at 163.270 kb on - strand at 163.295 kb on + strand at 163.295 kb on + strand at 163.362 kb on + strand at 163.362 kb on + strand at 163.363 kb on - strand at 163.363 kb on - strand at 163.433 kb on + strand, within OHPLBJKB_00153 at 163.479 kb on + strand, within OHPLBJKB_00153 at 163.480 kb on - strand, within OHPLBJKB_00153 at 163.590 kb on - strand, within OHPLBJKB_00153 at 163.659 kb on + strand, within OHPLBJKB_00153 at 163.695 kb on + strand, within OHPLBJKB_00153 at 163.695 kb on + strand, within OHPLBJKB_00153 at 163.695 kb on + strand, within OHPLBJKB_00153 at 163.748 kb on + strand, within OHPLBJKB_00153 at 163.748 kb on + strand, within OHPLBJKB_00153 at 163.749 kb on - strand, within OHPLBJKB_00153 at 163.767 kb on - strand, within OHPLBJKB_00153 at 163.768 kb on + strand, within OHPLBJKB_00153 at 163.769 kb on - strand, within OHPLBJKB_00153 at 163.769 kb on - strand, within OHPLBJKB_00153 at 163.769 kb on - strand, within OHPLBJKB_00153 at 163.769 kb on - strand, within OHPLBJKB_00153 at 163.853 kb on + strand, within OHPLBJKB_00153 at 163.853 kb on + strand, within OHPLBJKB_00153 at 163.853 kb on + strand, within OHPLBJKB_00153 at 163.887 kb on + strand, within OHPLBJKB_00153 at 163.993 kb on - strand, within OHPLBJKB_00153 at 163.995 kb on + strand, within OHPLBJKB_00153 at 163.996 kb on - strand, within OHPLBJKB_00153 at 164.060 kb on - strand, within OHPLBJKB_00153 at 164.143 kb on - strand, within OHPLBJKB_00153 at 164.244 kb on + strand at 164.244 kb on + strand at 164.245 kb on - strand at 164.257 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction lib only remove 161,554 + -0.8 161,554 + -1.2 161,554 + -0.2 161,555 - +0.2 161,555 - +1.1 161,557 + +0.0 161,557 + -0.8 161,558 - +0.2 161,558 - -0.5 161,567 - -0.5 161,570 + -1.3 161,570 + +0.3 161,570 + -0.9 161,570 + -0.2 161,570 + +1.0 161,570 + -0.5 161,571 - -0.1 161,571 - -0.7 161,571 - +0.5 161,571 - -1.1 161,677 - -0.3 161,677 - -0.1 161,677 - -0.2 161,677 - +0.8 161,763 + +0.4 161,848 - -1.5 161,852 - -0.5 161,887 + OHPLBJKB_00151 0.20 +0.7 161,887 + OHPLBJKB_00151 0.20 +0.0 161,887 + OHPLBJKB_00151 0.20 +0.8 161,887 + OHPLBJKB_00151 0.20 -0.2 161,888 - OHPLBJKB_00151 0.20 -0.8 161,933 - OHPLBJKB_00151 0.35 -0.3 162,111 + -0.5 162,111 + -0.5 162,112 - +1.1 162,112 - -0.4 162,112 - +0.6 162,179 - +0.5 162,179 - +0.5 162,227 + -0.2 162,251 + +2.1 162,261 + +1.7 162,261 + +0.3 162,261 + -1.1 162,261 + +2.1 162,262 - +0.0 162,263 + -0.3 162,264 - +0.8 162,271 + +0.3 162,272 - -0.4 162,292 + -3.2 162,294 + -0.3 162,294 + -0.2 162,294 + -0.2 162,294 + -1.1 162,294 + -1.8 162,294 + -0.4 162,294 + +0.7 162,295 - -0.6 162,295 - -0.1 162,295 - -0.4 162,334 + +0.5 162,335 - +0.1 162,364 + -0.7 162,453 + +0.0 162,453 + -0.5 162,454 - +0.1 162,454 - -0.0 162,457 + +0.1 162,457 + -0.6 162,457 + +0.4 162,458 - -2.5 162,490 - -0.4 162,607 - +0.2 162,612 + -0.2 162,612 + -0.3 162,612 + -0.1 162,612 + +0.1 162,612 + +0.2 162,612 + -0.3 162,612 + -1.7 162,613 - -0.3 162,613 - -2.3 162,656 - OHPLBJKB_00152 0.14 -0.1 162,682 + OHPLBJKB_00152 0.18 -0.6 162,682 + OHPLBJKB_00152 0.18 +0.0 162,683 - OHPLBJKB_00152 0.18 -0.6 162,683 - OHPLBJKB_00152 0.18 -0.0 162,683 - OHPLBJKB_00152 0.18 -0.8 162,709 - OHPLBJKB_00152 0.22 -0.1 162,762 - OHPLBJKB_00152 0.29 -0.3 162,773 + OHPLBJKB_00152 0.31 +1.2 162,773 + OHPLBJKB_00152 0.31 +0.2 162,774 - OHPLBJKB_00152 0.31 +0.2 162,828 + OHPLBJKB_00152 0.39 +0.0 162,829 - OHPLBJKB_00152 0.39 +0.3 162,863 + OHPLBJKB_00152 0.43 +0.5 162,863 + OHPLBJKB_00152 0.43 -0.4 162,864 - OHPLBJKB_00152 0.44 -0.2 163,103 + OHPLBJKB_00152 0.77 +0.6 163,103 + OHPLBJKB_00152 0.77 +0.0 163,104 - OHPLBJKB_00152 0.77 +1.1 163,104 - OHPLBJKB_00152 0.77 +0.7 163,104 - OHPLBJKB_00152 0.77 +0.2 163,104 - OHPLBJKB_00152 0.77 +1.4 163,104 - OHPLBJKB_00152 0.77 +0.6 163,104 - OHPLBJKB_00152 0.77 -0.1 163,120 + OHPLBJKB_00152 0.80 +0.3 163,181 + OHPLBJKB_00152 0.88 +1.8 163,181 + OHPLBJKB_00152 0.88 +0.2 163,181 + OHPLBJKB_00152 0.88 -0.8 163,181 + OHPLBJKB_00152 0.88 -1.0 163,182 - OHPLBJKB_00152 0.88 +1.6 163,182 - OHPLBJKB_00152 0.88 -0.3 163,182 - OHPLBJKB_00152 0.88 +0.7 163,183 + OHPLBJKB_00152 0.88 +0.3 163,183 + OHPLBJKB_00152 0.88 -0.0 163,183 + OHPLBJKB_00152 0.88 -0.3 163,183 + OHPLBJKB_00152 0.88 -0.1 163,183 + OHPLBJKB_00152 0.88 +0.0 163,240 + -0.6 163,241 - +0.2 163,249 + -0.5 163,270 - -0.3 163,270 - -0.5 163,270 - +0.3 163,295 + -0.8 163,295 + +0.3 163,362 + -0.5 163,362 + -0.5 163,363 - -0.1 163,363 - +0.3 163,433 + OHPLBJKB_00153 0.12 -1.2 163,479 + OHPLBJKB_00153 0.17 -0.2 163,480 - OHPLBJKB_00153 0.17 +0.3 163,590 - OHPLBJKB_00153 0.28 -0.2 163,659 + OHPLBJKB_00153 0.35 +0.0 163,695 + OHPLBJKB_00153 0.39 -0.3 163,695 + OHPLBJKB_00153 0.39 +0.5 163,695 + OHPLBJKB_00153 0.39 -1.5 163,748 + OHPLBJKB_00153 0.45 -1.1 163,748 + OHPLBJKB_00153 0.45 -0.5 163,749 - OHPLBJKB_00153 0.45 +0.6 163,767 - OHPLBJKB_00153 0.46 -0.2 163,768 + OHPLBJKB_00153 0.47 +0.3 163,769 - OHPLBJKB_00153 0.47 -0.3 163,769 - OHPLBJKB_00153 0.47 +0.3 163,769 - OHPLBJKB_00153 0.47 +0.4 163,769 - OHPLBJKB_00153 0.47 -0.2 163,853 + OHPLBJKB_00153 0.55 -0.1 163,853 + OHPLBJKB_00153 0.55 +0.8 163,853 + OHPLBJKB_00153 0.55 -0.9 163,887 + OHPLBJKB_00153 0.59 -0.5 163,993 - OHPLBJKB_00153 0.70 +0.0 163,995 + OHPLBJKB_00153 0.70 -0.1 163,996 - OHPLBJKB_00153 0.70 +0.2 164,060 - OHPLBJKB_00153 0.77 +0.6 164,143 - OHPLBJKB_00153 0.85 -0.4 164,244 + -0.1 164,244 + +0.5 164,245 - +0.4 164,257 - +0.8
Or see this region's nucleotide sequence