Experiment: lib only
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_00056 and OHPLBJKB_00057 are separated by 39 nucleotides OHPLBJKB_00057 and OHPLBJKB_00058 are separated by 220 nucleotides OHPLBJKB_00058 and OHPLBJKB_00059 are separated by 126 nucleotides OHPLBJKB_00059 and OHPLBJKB_00060 are separated by 65 nucleotides
OHPLBJKB_00056: OHPLBJKB_00056 - hypothetical protein, at 62,735 to 63,142
_00056
OHPLBJKB_00057: OHPLBJKB_00057 - hypothetical protein, at 63,182 to 63,559
_00057
OHPLBJKB_00058: OHPLBJKB_00058 - hypothetical protein, at 63,780 to 64,643
_00058
OHPLBJKB_00059: OHPLBJKB_00059 - Ribonuclease PH, at 64,770 to 65,486
_00059
OHPLBJKB_00060: OHPLBJKB_00060 - Orotate phosphoribosyltransferase, at 65,552 to 66,193
_00060
Position (kb) 63
64
65 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 62.873 kb on - strand, within OHPLBJKB_00056 at 62.875 kb on + strand, within OHPLBJKB_00056 at 62.875 kb on + strand, within OHPLBJKB_00056 at 62.876 kb on - strand, within OHPLBJKB_00056 at 62.969 kb on - strand, within OHPLBJKB_00056 at 63.029 kb on + strand, within OHPLBJKB_00056 at 63.039 kb on + strand, within OHPLBJKB_00056 at 63.039 kb on + strand, within OHPLBJKB_00056 at 63.069 kb on - strand, within OHPLBJKB_00056 at 63.130 kb on + strand at 63.131 kb on - strand at 63.184 kb on - strand at 63.238 kb on - strand, within OHPLBJKB_00057 at 63.284 kb on + strand, within OHPLBJKB_00057 at 63.285 kb on - strand, within OHPLBJKB_00057 at 63.288 kb on - strand, within OHPLBJKB_00057 at 63.350 kb on + strand, within OHPLBJKB_00057 at 63.350 kb on + strand, within OHPLBJKB_00057 at 63.353 kb on + strand, within OHPLBJKB_00057 at 63.353 kb on + strand, within OHPLBJKB_00057 at 63.353 kb on + strand, within OHPLBJKB_00057 at 63.354 kb on - strand, within OHPLBJKB_00057 at 63.354 kb on - strand, within OHPLBJKB_00057 at 63.354 kb on - strand, within OHPLBJKB_00057 at 63.434 kb on + strand, within OHPLBJKB_00057 at 63.487 kb on + strand, within OHPLBJKB_00057 at 63.527 kb on + strand at 63.608 kb on + strand at 63.768 kb on + strand at 63.768 kb on + strand at 63.768 kb on + strand at 63.768 kb on + strand at 63.769 kb on - strand at 63.769 kb on - strand at 63.782 kb on - strand at 63.789 kb on - strand at 63.863 kb on + strand at 63.911 kb on + strand, within OHPLBJKB_00058 at 63.911 kb on + strand, within OHPLBJKB_00058 at 63.912 kb on - strand, within OHPLBJKB_00058 at 63.912 kb on - strand, within OHPLBJKB_00058 at 63.958 kb on + strand, within OHPLBJKB_00058 at 63.959 kb on - strand, within OHPLBJKB_00058 at 63.959 kb on - strand, within OHPLBJKB_00058 at 64.124 kb on + strand, within OHPLBJKB_00058 at 64.220 kb on + strand, within OHPLBJKB_00058 at 64.220 kb on + strand, within OHPLBJKB_00058 at 64.220 kb on + strand, within OHPLBJKB_00058 at 64.221 kb on - strand, within OHPLBJKB_00058 at 64.221 kb on - strand, within OHPLBJKB_00058 at 64.221 kb on - strand, within OHPLBJKB_00058 at 64.427 kb on + strand, within OHPLBJKB_00058 at 64.451 kb on + strand, within OHPLBJKB_00058 at 64.452 kb on - strand, within OHPLBJKB_00058 at 64.487 kb on + strand, within OHPLBJKB_00058 at 64.488 kb on - strand, within OHPLBJKB_00058 at 64.540 kb on + strand, within OHPLBJKB_00058 at 64.540 kb on + strand, within OHPLBJKB_00058 at 64.541 kb on - strand, within OHPLBJKB_00058 at 64.632 kb on - strand at 64.643 kb on + strand at 64.643 kb on + strand at 64.643 kb on + strand at 64.657 kb on + strand at 64.660 kb on - strand at 64.660 kb on - strand at 64.681 kb on - strand at 64.683 kb on - strand at 64.728 kb on + strand at 64.728 kb on + strand at 64.730 kb on + strand at 64.787 kb on + strand at 64.823 kb on + strand at 64.823 kb on + strand at 64.824 kb on - strand at 64.824 kb on - strand at 64.827 kb on + strand at 64.827 kb on + strand at 64.827 kb on + strand at 64.828 kb on - strand at 64.828 kb on - strand at 64.828 kb on - strand at 64.828 kb on - strand at 64.828 kb on - strand at 64.828 kb on - strand at 64.829 kb on + strand at 64.829 kb on + strand at 64.830 kb on - strand at 64.830 kb on - strand at 64.886 kb on + strand, within OHPLBJKB_00059 at 64.976 kb on + strand, within OHPLBJKB_00059 at 64.976 kb on + strand, within OHPLBJKB_00059 at 64.977 kb on - strand, within OHPLBJKB_00059 at 65.013 kb on - strand, within OHPLBJKB_00059 at 65.013 kb on - strand, within OHPLBJKB_00059 at 65.106 kb on - strand, within OHPLBJKB_00059 at 65.245 kb on + strand, within OHPLBJKB_00059 at 65.245 kb on + strand, within OHPLBJKB_00059 at 65.245 kb on + strand, within OHPLBJKB_00059 at 65.245 kb on + strand, within OHPLBJKB_00059 at 65.270 kb on - strand, within OHPLBJKB_00059 at 65.335 kb on + strand, within OHPLBJKB_00059 at 65.335 kb on + strand, within OHPLBJKB_00059 at 65.336 kb on - strand, within OHPLBJKB_00059 at 65.336 kb on - strand, within OHPLBJKB_00059 at 65.336 kb on - strand, within OHPLBJKB_00059 at 65.336 kb on - strand, within OHPLBJKB_00059 at 65.410 kb on + strand, within OHPLBJKB_00059 at 65.411 kb on - strand, within OHPLBJKB_00059 at 65.525 kb on + strand at 65.533 kb on + strand at 65.533 kb on + strand at 65.534 kb on - strand at 65.534 kb on - strand at 65.604 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction lib only remove 62,873 - OHPLBJKB_00056 0.34 +0.3 62,875 + OHPLBJKB_00056 0.34 -0.1 62,875 + OHPLBJKB_00056 0.34 +0.4 62,876 - OHPLBJKB_00056 0.35 +0.5 62,969 - OHPLBJKB_00056 0.57 +0.5 63,029 + OHPLBJKB_00056 0.72 +1.2 63,039 + OHPLBJKB_00056 0.75 +0.4 63,039 + OHPLBJKB_00056 0.75 -0.0 63,069 - OHPLBJKB_00056 0.82 +0.7 63,130 + +0.8 63,131 - +0.1 63,184 - +0.5 63,238 - OHPLBJKB_00057 0.15 +0.3 63,284 + OHPLBJKB_00057 0.27 +0.4 63,285 - OHPLBJKB_00057 0.27 -0.4 63,288 - OHPLBJKB_00057 0.28 +0.2 63,350 + OHPLBJKB_00057 0.44 +0.9 63,350 + OHPLBJKB_00057 0.44 +1.5 63,353 + OHPLBJKB_00057 0.45 -0.1 63,353 + OHPLBJKB_00057 0.45 +0.3 63,353 + OHPLBJKB_00057 0.45 -0.5 63,354 - OHPLBJKB_00057 0.46 +1.3 63,354 - OHPLBJKB_00057 0.46 -0.2 63,354 - OHPLBJKB_00057 0.46 -0.0 63,434 + OHPLBJKB_00057 0.67 -0.8 63,487 + OHPLBJKB_00057 0.81 +0.2 63,527 + -0.7 63,608 + +0.4 63,768 + -0.1 63,768 + -0.5 63,768 + -0.6 63,768 + -0.4 63,769 - +0.1 63,769 - -0.4 63,782 - +0.3 63,789 - +0.2 63,863 + +0.5 63,911 + OHPLBJKB_00058 0.15 +0.0 63,911 + OHPLBJKB_00058 0.15 +0.6 63,912 - OHPLBJKB_00058 0.15 -0.9 63,912 - OHPLBJKB_00058 0.15 +0.9 63,958 + OHPLBJKB_00058 0.21 +0.3 63,959 - OHPLBJKB_00058 0.21 -0.6 63,959 - OHPLBJKB_00058 0.21 -0.3 64,124 + OHPLBJKB_00058 0.40 -0.9 64,220 + OHPLBJKB_00058 0.51 +0.4 64,220 + OHPLBJKB_00058 0.51 -0.8 64,220 + OHPLBJKB_00058 0.51 +0.4 64,221 - OHPLBJKB_00058 0.51 +0.8 64,221 - OHPLBJKB_00058 0.51 -1.5 64,221 - OHPLBJKB_00058 0.51 -0.4 64,427 + OHPLBJKB_00058 0.75 +1.1 64,451 + OHPLBJKB_00058 0.78 -0.5 64,452 - OHPLBJKB_00058 0.78 +0.0 64,487 + OHPLBJKB_00058 0.82 +0.3 64,488 - OHPLBJKB_00058 0.82 -0.5 64,540 + OHPLBJKB_00058 0.88 +0.6 64,540 + OHPLBJKB_00058 0.88 +0.2 64,541 - OHPLBJKB_00058 0.88 -0.4 64,632 - +0.5 64,643 + -0.5 64,643 + +0.0 64,643 + +0.3 64,657 + -0.3 64,660 - +0.3 64,660 - -0.1 64,681 - +0.2 64,683 - -0.3 64,728 + -0.3 64,728 + -0.4 64,730 + +0.3 64,787 + -0.6 64,823 + -0.8 64,823 + -1.3 64,824 - +0.8 64,824 - -3.6 64,827 + -0.3 64,827 + -1.9 64,827 + -0.5 64,828 - -0.5 64,828 - -0.4 64,828 - -0.6 64,828 - -1.1 64,828 - -0.9 64,828 - -0.4 64,829 + +0.5 64,829 + -0.1 64,830 - +0.0 64,830 - +0.0 64,886 + OHPLBJKB_00059 0.16 -1.3 64,976 + OHPLBJKB_00059 0.29 +0.7 64,976 + OHPLBJKB_00059 0.29 +0.5 64,977 - OHPLBJKB_00059 0.29 -2.5 65,013 - OHPLBJKB_00059 0.34 -0.3 65,013 - OHPLBJKB_00059 0.34 -0.9 65,106 - OHPLBJKB_00059 0.47 -1.6 65,245 + OHPLBJKB_00059 0.66 -0.1 65,245 + OHPLBJKB_00059 0.66 -0.3 65,245 + OHPLBJKB_00059 0.66 +0.1 65,245 + OHPLBJKB_00059 0.66 +0.3 65,270 - OHPLBJKB_00059 0.70 +0.4 65,335 + OHPLBJKB_00059 0.79 -0.8 65,335 + OHPLBJKB_00059 0.79 +0.4 65,336 - OHPLBJKB_00059 0.79 -1.2 65,336 - OHPLBJKB_00059 0.79 -2.5 65,336 - OHPLBJKB_00059 0.79 -0.1 65,336 - OHPLBJKB_00059 0.79 -0.7 65,410 + OHPLBJKB_00059 0.89 +0.3 65,411 - OHPLBJKB_00059 0.89 -0.5 65,525 + +0.5 65,533 + +0.0 65,533 + -0.1 65,534 - -0.2 65,534 - +0.8 65,604 + +0.5
Or see this region's nucleotide sequence