Experiment: NL-CCM; ambient oxygen
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06757 and MPMX19_06758 are separated by 26 nucleotides MPMX19_06758 and MPMX19_06759 overlap by 4 nucleotides MPMX19_06759 and MPMX19_06760 are separated by 49 nucleotides
MPMX19_06757: MPMX19_06757 - hypothetical protein, at 23,247 to 24,002
_06757
MPMX19_06758: MPMX19_06758 - Putative aliphatic sulfonates transport permease protein SsuC, at 24,029 to 24,910
_06758
MPMX19_06759: MPMX19_06759 - Taurine import ATP-binding protein TauB, at 24,907 to 25,710
_06759
MPMX19_06760: MPMX19_06760 - Taurine-binding periplasmic protein, at 25,760 to 26,767
_06760
Position (kb) 24
25
26 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 23.932 kb on + strand at 23.932 kb on + strand at 23.932 kb on + strand at 23.933 kb on - strand at 23.933 kb on - strand at 24.466 kb on - strand, within MPMX19_06758 at 24.466 kb on - strand, within MPMX19_06758 at 24.466 kb on - strand, within MPMX19_06758 at 25.319 kb on + strand, within MPMX19_06759 at 25.320 kb on - strand, within MPMX19_06759 at 25.320 kb on - strand, within MPMX19_06759 at 25.320 kb on - strand, within MPMX19_06759 at 25.320 kb on - strand, within MPMX19_06759 at 25.320 kb on - strand, within MPMX19_06759 at 25.679 kb on + strand at 25.679 kb on + strand at 25.680 kb on - strand at 25.761 kb on + strand at 25.761 kb on + strand at 25.761 kb on + strand at 25.761 kb on + strand at 25.761 kb on + strand at 25.761 kb on + strand at 25.761 kb on + strand at 25.762 kb on - strand at 25.762 kb on - strand at 25.762 kb on - strand at 25.762 kb on - strand at 25.806 kb on + strand at 25.806 kb on + strand at 26.325 kb on + strand, within MPMX19_06760 at 26.325 kb on + strand, within MPMX19_06760 at 26.325 kb on + strand, within MPMX19_06760 at 26.325 kb on + strand, within MPMX19_06760 at 26.325 kb on + strand, within MPMX19_06760 at 26.326 kb on - strand, within MPMX19_06760 at 26.326 kb on - strand, within MPMX19_06760 at 26.326 kb on - strand, within MPMX19_06760 at 26.326 kb on - strand, within MPMX19_06760 at 26.326 kb on - strand, within MPMX19_06760 at 26.326 kb on - strand, within MPMX19_06760 at 26.326 kb on - strand, within MPMX19_06760 at 26.337 kb on + strand, within MPMX19_06760 at 26.337 kb on + strand, within MPMX19_06760 at 26.338 kb on - strand, within MPMX19_06760 at 26.338 kb on - strand, within MPMX19_06760 at 26.595 kb on + strand, within MPMX19_06760 at 26.595 kb on + strand, within MPMX19_06760 at 26.596 kb on - strand, within MPMX19_06760 at 26.596 kb on - strand, within MPMX19_06760 at 26.596 kb on - strand, within MPMX19_06760 at 26.653 kb on + strand, within MPMX19_06760 at 26.654 kb on - strand, within MPMX19_06760 at 26.654 kb on - strand, within MPMX19_06760 at 26.661 kb on + strand, within MPMX19_06760
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM; ambient oxygen remove 23,932 + +0.6 23,932 + -1.3 23,932 + +0.8 23,933 - -1.3 23,933 - +0.8 24,466 - MPMX19_06758 0.50 -0.4 24,466 - MPMX19_06758 0.50 -0.7 24,466 - MPMX19_06758 0.50 -1.3 25,319 + MPMX19_06759 0.51 +1.8 25,320 - MPMX19_06759 0.51 -1.5 25,320 - MPMX19_06759 0.51 +0.2 25,320 - MPMX19_06759 0.51 +0.0 25,320 - MPMX19_06759 0.51 +0.5 25,320 - MPMX19_06759 0.51 +0.7 25,679 + -1.5 25,679 + +0.2 25,680 - -0.5 25,761 + -0.2 25,761 + -0.4 25,761 + -2.0 25,761 + -0.8 25,761 + -0.1 25,761 + -1.3 25,761 + +0.5 25,762 - -1.1 25,762 - -0.5 25,762 - -1.1 25,762 - -1.1 25,806 + -2.1 25,806 + -1.0 26,325 + MPMX19_06760 0.56 +0.3 26,325 + MPMX19_06760 0.56 -2.2 26,325 + MPMX19_06760 0.56 +1.1 26,325 + MPMX19_06760 0.56 +0.6 26,325 + MPMX19_06760 0.56 -2.5 26,326 - MPMX19_06760 0.56 -3.5 26,326 - MPMX19_06760 0.56 -0.1 26,326 - MPMX19_06760 0.56 +0.2 26,326 - MPMX19_06760 0.56 -0.7 26,326 - MPMX19_06760 0.56 -1.9 26,326 - MPMX19_06760 0.56 +0.2 26,326 - MPMX19_06760 0.56 +0.9 26,337 + MPMX19_06760 0.57 -1.1 26,337 + MPMX19_06760 0.57 -1.4 26,338 - MPMX19_06760 0.57 +0.7 26,338 - MPMX19_06760 0.57 -0.0 26,595 + MPMX19_06760 0.83 -0.3 26,595 + MPMX19_06760 0.83 -1.7 26,596 - MPMX19_06760 0.83 +0.2 26,596 - MPMX19_06760 0.83 -0.5 26,596 - MPMX19_06760 0.83 -0.6 26,653 + MPMX19_06760 0.89 -1.3 26,654 - MPMX19_06760 0.89 -0.1 26,654 - MPMX19_06760 0.89 +0.5 26,661 + MPMX19_06760 0.89 -1.9
Or see this region's nucleotide sequence