Experiment: NL-CCM; ambient oxygen
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_04178 and MPMX19_04179 are separated by 90 nucleotides MPMX19_04179 and MPMX19_04180 are separated by 376 nucleotides
MPMX19_04178: MPMX19_04178 - hypothetical protein, at 503,563 to 504,495
_04178
MPMX19_04179: MPMX19_04179 - D-inositol-3-phosphate glycosyltransferase, at 504,586 to 505,755
_04179
MPMX19_04180: MPMX19_04180 - D-inositol-3-phosphate glycosyltransferase, at 506,132 to 507,334
_04180
Position (kb) 504
505
506 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 503.975 kb on + strand, within MPMX19_04178 at 503.975 kb on + strand, within MPMX19_04178 at 504.149 kb on + strand, within MPMX19_04178 at 504.149 kb on + strand, within MPMX19_04178 at 504.149 kb on + strand, within MPMX19_04178 at 504.150 kb on - strand, within MPMX19_04178 at 504.185 kb on + strand, within MPMX19_04178 at 504.185 kb on + strand, within MPMX19_04178 at 504.185 kb on + strand, within MPMX19_04178 at 504.185 kb on + strand, within MPMX19_04178 at 504.185 kb on + strand, within MPMX19_04178 at 504.185 kb on + strand, within MPMX19_04178 at 504.185 kb on + strand, within MPMX19_04178 at 504.185 kb on + strand, within MPMX19_04178 at 504.185 kb on + strand, within MPMX19_04178 at 504.185 kb on + strand, within MPMX19_04178 at 504.185 kb on + strand, within MPMX19_04178 at 504.185 kb on + strand, within MPMX19_04178 at 504.185 kb on + strand, within MPMX19_04178 at 504.185 kb on + strand, within MPMX19_04178 at 504.185 kb on + strand, within MPMX19_04178 at 504.185 kb on + strand, within MPMX19_04178 at 504.185 kb on + strand, within MPMX19_04178 at 504.185 kb on + strand, within MPMX19_04178 at 504.185 kb on + strand, within MPMX19_04178 at 504.185 kb on + strand, within MPMX19_04178 at 504.185 kb on + strand, within MPMX19_04178 at 504.185 kb on + strand, within MPMX19_04178 at 504.185 kb on + strand, within MPMX19_04178 at 504.185 kb on + strand, within MPMX19_04178 at 504.185 kb on + strand, within MPMX19_04178 at 504.185 kb on + strand, within MPMX19_04178 at 504.185 kb on + strand, within MPMX19_04178 at 504.186 kb on - strand, within MPMX19_04178 at 504.186 kb on - strand, within MPMX19_04178 at 504.186 kb on - strand, within MPMX19_04178 at 504.186 kb on - strand, within MPMX19_04178 at 504.186 kb on - strand, within MPMX19_04178 at 504.186 kb on - strand, within MPMX19_04178 at 504.186 kb on - strand, within MPMX19_04178 at 504.186 kb on - strand, within MPMX19_04178 at 504.186 kb on - strand, within MPMX19_04178 at 504.186 kb on - strand, within MPMX19_04178 at 504.186 kb on - strand, within MPMX19_04178 at 504.186 kb on - strand, within MPMX19_04178 at 504.186 kb on - strand, within MPMX19_04178 at 504.186 kb on - strand, within MPMX19_04178 at 504.186 kb on - strand, within MPMX19_04178 at 504.186 kb on - strand, within MPMX19_04178 at 504.186 kb on - strand, within MPMX19_04178 at 504.186 kb on - strand, within MPMX19_04178 at 504.186 kb on - strand, within MPMX19_04178 at 504.186 kb on - strand, within MPMX19_04178 at 504.186 kb on - strand, within MPMX19_04178 at 504.186 kb on - strand, within MPMX19_04178 at 504.275 kb on + strand, within MPMX19_04178 at 504.283 kb on + strand, within MPMX19_04178 at 504.344 kb on + strand, within MPMX19_04178 at 504.344 kb on + strand, within MPMX19_04178 at 504.344 kb on + strand, within MPMX19_04178 at 504.344 kb on + strand, within MPMX19_04178 at 504.345 kb on - strand, within MPMX19_04178 at 504.356 kb on + strand, within MPMX19_04178 at 504.357 kb on - strand, within MPMX19_04178 at 504.357 kb on - strand, within MPMX19_04178 at 504.401 kb on + strand, within MPMX19_04178 at 504.401 kb on + strand, within MPMX19_04178 at 504.401 kb on + strand, within MPMX19_04178 at 504.401 kb on + strand, within MPMX19_04178 at 504.401 kb on + strand, within MPMX19_04178 at 504.401 kb on + strand, within MPMX19_04178 at 504.401 kb on + strand, within MPMX19_04178 at 504.401 kb on + strand, within MPMX19_04178 at 504.402 kb on - strand at 504.402 kb on - strand at 504.689 kb on + strand at 504.689 kb on + strand at 504.689 kb on + strand at 504.690 kb on - strand at 504.807 kb on + strand, within MPMX19_04179 at 504.808 kb on - strand, within MPMX19_04179 at 505.073 kb on + strand, within MPMX19_04179 at 505.073 kb on + strand, within MPMX19_04179 at 505.073 kb on + strand, within MPMX19_04179 at 505.073 kb on + strand, within MPMX19_04179 at 505.073 kb on + strand, within MPMX19_04179 at 505.074 kb on - strand, within MPMX19_04179 at 505.074 kb on - strand, within MPMX19_04179 at 505.074 kb on - strand, within MPMX19_04179 at 505.074 kb on - strand, within MPMX19_04179 at 505.074 kb on - strand, within MPMX19_04179 at 505.517 kb on + strand, within MPMX19_04179 at 505.517 kb on + strand, within MPMX19_04179 at 505.517 kb on + strand, within MPMX19_04179 at 505.518 kb on - strand, within MPMX19_04179 at 505.527 kb on + strand, within MPMX19_04179 at 505.528 kb on - strand, within MPMX19_04179 at 505.598 kb on + strand, within MPMX19_04179 at 505.598 kb on + strand, within MPMX19_04179 at 505.598 kb on + strand, within MPMX19_04179 at 505.598 kb on + strand, within MPMX19_04179 at 505.599 kb on - strand, within MPMX19_04179 at 505.599 kb on - strand, within MPMX19_04179 at 505.599 kb on - strand, within MPMX19_04179 at 505.599 kb on - strand, within MPMX19_04179 at 505.599 kb on - strand, within MPMX19_04179 at 505.599 kb on - strand, within MPMX19_04179 at 505.631 kb on + strand, within MPMX19_04179 at 505.631 kb on + strand, within MPMX19_04179 at 505.632 kb on - strand, within MPMX19_04179 at 505.632 kb on - strand, within MPMX19_04179 at 505.632 kb on - strand, within MPMX19_04179 at 505.632 kb on - strand, within MPMX19_04179 at 505.632 kb on - strand, within MPMX19_04179 at 505.632 kb on - strand, within MPMX19_04179 at 505.746 kb on + strand at 505.748 kb on + strand at 505.748 kb on + strand at 505.748 kb on + strand at 505.748 kb on + strand at 505.748 kb on + strand at 505.748 kb on + strand at 505.748 kb on + strand at 505.748 kb on + strand at 505.748 kb on + strand at 505.748 kb on + strand at 505.748 kb on + strand at 505.748 kb on + strand at 505.749 kb on - strand at 505.749 kb on - strand at 505.749 kb on - strand at 505.749 kb on - strand at 505.749 kb on - strand at 505.749 kb on - strand at 505.749 kb on - strand at 505.749 kb on - strand at 505.749 kb on - strand at 505.749 kb on - strand at 505.749 kb on - strand at 505.749 kb on - strand at 505.749 kb on - strand at 505.749 kb on - strand at 505.749 kb on - strand at 505.749 kb on - strand at 505.810 kb on + strand at 505.811 kb on - strand at 505.811 kb on - strand at 505.811 kb on - strand at 505.811 kb on - strand at 505.852 kb on + strand at 505.852 kb on + strand at 505.852 kb on + strand at 505.852 kb on + strand at 505.853 kb on - strand at 505.853 kb on - strand at 505.853 kb on - strand at 505.853 kb on - strand at 505.853 kb on - strand at 505.853 kb on - strand at 505.853 kb on - strand at 505.853 kb on - strand at 505.853 kb on - strand at 505.983 kb on + strand at 505.983 kb on + strand at 505.984 kb on - strand at 505.984 kb on - strand at 505.984 kb on - strand at 505.984 kb on - strand at 506.038 kb on - strand at 506.077 kb on + strand at 506.114 kb on + strand at 506.114 kb on + strand at 506.220 kb on + strand at 506.220 kb on + strand at 506.220 kb on + strand at 506.220 kb on + strand at 506.220 kb on + strand at 506.220 kb on + strand at 506.220 kb on + strand at 506.220 kb on + strand at 506.220 kb on + strand at 506.220 kb on + strand at 506.220 kb on + strand at 506.220 kb on + strand at 506.221 kb on - strand at 506.221 kb on - strand at 506.221 kb on - strand at 506.221 kb on - strand at 506.221 kb on - strand at 506.221 kb on - strand at 506.221 kb on - strand at 506.221 kb on - strand at 506.221 kb on - strand at 506.221 kb on - strand at 506.221 kb on - strand at 506.221 kb on - strand at 506.221 kb on - strand at 506.221 kb on - strand at 506.244 kb on + strand at 506.244 kb on + strand at 506.244 kb on + strand at 506.245 kb on - strand at 506.245 kb on - strand at 506.304 kb on + strand, within MPMX19_04180 at 506.304 kb on + strand, within MPMX19_04180 at 506.735 kb on + strand, within MPMX19_04180 at 506.735 kb on + strand, within MPMX19_04180
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM; ambient oxygen remove 503,975 + MPMX19_04178 0.44 -0.7 503,975 + MPMX19_04178 0.44 -0.1 504,149 + MPMX19_04178 0.63 -1.0 504,149 + MPMX19_04178 0.63 +0.3 504,149 + MPMX19_04178 0.63 -0.6 504,150 - MPMX19_04178 0.63 -0.5 504,185 + MPMX19_04178 0.67 -0.4 504,185 + MPMX19_04178 0.67 +2.0 504,185 + MPMX19_04178 0.67 +0.2 504,185 + MPMX19_04178 0.67 -1.4 504,185 + MPMX19_04178 0.67 -1.2 504,185 + MPMX19_04178 0.67 -1.4 504,185 + MPMX19_04178 0.67 -1.3 504,185 + MPMX19_04178 0.67 -0.9 504,185 + MPMX19_04178 0.67 +0.5 504,185 + MPMX19_04178 0.67 -1.0 504,185 + MPMX19_04178 0.67 +0.2 504,185 + MPMX19_04178 0.67 -0.3 504,185 + MPMX19_04178 0.67 -1.1 504,185 + MPMX19_04178 0.67 +0.9 504,185 + MPMX19_04178 0.67 -0.2 504,185 + MPMX19_04178 0.67 +0.7 504,185 + MPMX19_04178 0.67 -0.7 504,185 + MPMX19_04178 0.67 -1.2 504,185 + MPMX19_04178 0.67 +0.7 504,185 + MPMX19_04178 0.67 +0.3 504,185 + MPMX19_04178 0.67 +0.5 504,185 + MPMX19_04178 0.67 -0.1 504,185 + MPMX19_04178 0.67 -0.3 504,185 + MPMX19_04178 0.67 -0.4 504,185 + MPMX19_04178 0.67 -0.2 504,185 + MPMX19_04178 0.67 +0.4 504,185 + MPMX19_04178 0.67 +0.0 504,186 - MPMX19_04178 0.67 -0.2 504,186 - MPMX19_04178 0.67 +0.6 504,186 - MPMX19_04178 0.67 +0.4 504,186 - MPMX19_04178 0.67 -1.0 504,186 - MPMX19_04178 0.67 -0.6 504,186 - MPMX19_04178 0.67 -1.6 504,186 - MPMX19_04178 0.67 -0.3 504,186 - MPMX19_04178 0.67 +0.9 504,186 - MPMX19_04178 0.67 -0.1 504,186 - MPMX19_04178 0.67 +0.3 504,186 - MPMX19_04178 0.67 -0.3 504,186 - MPMX19_04178 0.67 +0.5 504,186 - MPMX19_04178 0.67 +0.6 504,186 - MPMX19_04178 0.67 +1.4 504,186 - MPMX19_04178 0.67 +0.0 504,186 - MPMX19_04178 0.67 -1.7 504,186 - MPMX19_04178 0.67 +0.9 504,186 - MPMX19_04178 0.67 -1.7 504,186 - MPMX19_04178 0.67 +1.3 504,186 - MPMX19_04178 0.67 -1.0 504,186 - MPMX19_04178 0.67 +0.5 504,186 - MPMX19_04178 0.67 -0.3 504,275 + MPMX19_04178 0.76 -1.3 504,283 + MPMX19_04178 0.77 +0.4 504,344 + MPMX19_04178 0.84 -0.7 504,344 + MPMX19_04178 0.84 +0.5 504,344 + MPMX19_04178 0.84 -1.0 504,344 + MPMX19_04178 0.84 -2.0 504,345 - MPMX19_04178 0.84 +0.6 504,356 + MPMX19_04178 0.85 -0.5 504,357 - MPMX19_04178 0.85 +0.0 504,357 - MPMX19_04178 0.85 +0.5 504,401 + MPMX19_04178 0.90 +0.0 504,401 + MPMX19_04178 0.90 -0.3 504,401 + MPMX19_04178 0.90 -0.9 504,401 + MPMX19_04178 0.90 +0.0 504,401 + MPMX19_04178 0.90 +0.6 504,401 + MPMX19_04178 0.90 -0.7 504,401 + MPMX19_04178 0.90 -1.0 504,401 + MPMX19_04178 0.90 -0.7 504,402 - -2.0 504,402 - -0.3 504,689 + -0.3 504,689 + +1.2 504,689 + +0.3 504,690 - -0.5 504,807 + MPMX19_04179 0.19 +0.5 504,808 - MPMX19_04179 0.19 -0.9 505,073 + MPMX19_04179 0.42 +0.1 505,073 + MPMX19_04179 0.42 +0.3 505,073 + MPMX19_04179 0.42 -0.9 505,073 + MPMX19_04179 0.42 -0.4 505,073 + MPMX19_04179 0.42 +0.6 505,074 - MPMX19_04179 0.42 -1.6 505,074 - MPMX19_04179 0.42 -0.1 505,074 - MPMX19_04179 0.42 -1.6 505,074 - MPMX19_04179 0.42 -0.4 505,074 - MPMX19_04179 0.42 -0.3 505,517 + MPMX19_04179 0.80 -0.2 505,517 + MPMX19_04179 0.80 -1.7 505,517 + MPMX19_04179 0.80 -3.4 505,518 - MPMX19_04179 0.80 -1.7 505,527 + MPMX19_04179 0.80 +0.0 505,528 - MPMX19_04179 0.81 +0.4 505,598 + MPMX19_04179 0.86 -0.1 505,598 + MPMX19_04179 0.86 -2.0 505,598 + MPMX19_04179 0.86 -0.2 505,598 + MPMX19_04179 0.86 -1.7 505,599 - MPMX19_04179 0.87 +1.0 505,599 - MPMX19_04179 0.87 -1.3 505,599 - MPMX19_04179 0.87 -1.4 505,599 - MPMX19_04179 0.87 -2.5 505,599 - MPMX19_04179 0.87 -0.8 505,599 - MPMX19_04179 0.87 +0.0 505,631 + MPMX19_04179 0.89 -1.0 505,631 + MPMX19_04179 0.89 +1.2 505,632 - MPMX19_04179 0.89 -1.0 505,632 - MPMX19_04179 0.89 -0.2 505,632 - MPMX19_04179 0.89 -0.2 505,632 - MPMX19_04179 0.89 -0.8 505,632 - MPMX19_04179 0.89 -1.0 505,632 - MPMX19_04179 0.89 -2.3 505,746 + -0.6 505,748 + -0.4 505,748 + +1.9 505,748 + -1.3 505,748 + -0.7 505,748 + +1.0 505,748 + +0.8 505,748 + -0.2 505,748 + -2.0 505,748 + +0.5 505,748 + -1.6 505,748 + +0.6 505,748 + -0.4 505,749 - +0.3 505,749 - -1.1 505,749 - -0.4 505,749 - +0.6 505,749 - +0.6 505,749 - -2.2 505,749 - +1.0 505,749 - -1.6 505,749 - -1.0 505,749 - -0.7 505,749 - +0.6 505,749 - +1.6 505,749 - +0.9 505,749 - +0.5 505,749 - +0.4 505,749 - +0.2 505,810 + +0.6 505,811 - +0.5 505,811 - -0.7 505,811 - +0.9 505,811 - +0.3 505,852 + +1.4 505,852 + -0.5 505,852 + +0.4 505,852 + +1.7 505,853 - -1.0 505,853 - -2.1 505,853 - +0.0 505,853 - -1.3 505,853 - +1.2 505,853 - -1.2 505,853 - -0.4 505,853 - +0.4 505,853 - -1.0 505,983 + -1.1 505,983 + +1.1 505,984 - -0.7 505,984 - +0.4 505,984 - -1.2 505,984 - -0.2 506,038 - +0.9 506,077 + -1.6 506,114 + -0.8 506,114 + +0.0 506,220 + +0.1 506,220 + -2.3 506,220 + -0.4 506,220 + +0.3 506,220 + -1.9 506,220 + +0.2 506,220 + +0.4 506,220 + -0.6 506,220 + +0.3 506,220 + -0.1 506,220 + -2.5 506,220 + -1.4 506,221 - +0.8 506,221 - -1.6 506,221 - -0.6 506,221 - +0.1 506,221 - +0.3 506,221 - -0.3 506,221 - -0.8 506,221 - -0.4 506,221 - -1.6 506,221 - -1.6 506,221 - -0.5 506,221 - -0.9 506,221 - -1.0 506,221 - -1.1 506,244 + +1.6 506,244 + +0.4 506,244 + -0.6 506,245 - +0.3 506,245 - -0.5 506,304 + MPMX19_04180 0.14 +0.3 506,304 + MPMX19_04180 0.14 +0.5 506,735 + MPMX19_04180 0.50 -0.5 506,735 + MPMX19_04180 0.50 +0.7
Or see this region's nucleotide sequence