Experiment: NL-CCM; ambient oxygen
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03271 and MPMX19_03272 are separated by 14 nucleotides MPMX19_03272 and MPMX19_03273 overlap by 4 nucleotides
MPMX19_03271: MPMX19_03271 - hypothetical protein, at 615,289 to 616,344
_03271
MPMX19_03272: MPMX19_03272 - sn-glycerol-3-phosphate import ATP-binding protein UgpC, at 616,359 to 617,402
_03272
MPMX19_03273: MPMX19_03273 - Oligosaccharide 4-alpha-D-glucosyltransferase, at 617,399 to 619,753
_03273
Position (kb) 616
617
618 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 615.364 kb on + strand at 615.364 kb on + strand at 615.364 kb on + strand at 615.364 kb on + strand at 615.364 kb on + strand at 615.364 kb on + strand at 615.364 kb on + strand at 615.364 kb on + strand at 615.364 kb on + strand at 615.364 kb on + strand at 615.364 kb on + strand at 615.364 kb on + strand at 615.364 kb on + strand at 615.364 kb on + strand at 615.365 kb on - strand at 615.365 kb on - strand at 615.365 kb on - strand at 615.365 kb on - strand at 615.365 kb on - strand at 615.365 kb on - strand at 615.365 kb on - strand at 615.365 kb on - strand at 615.365 kb on - strand at 615.365 kb on - strand at 615.365 kb on - strand at 615.365 kb on - strand at 615.365 kb on - strand at 615.365 kb on - strand at 615.365 kb on - strand at 615.365 kb on - strand at 615.365 kb on - strand at 615.365 kb on - strand at 615.365 kb on - strand at 615.370 kb on + strand at 615.370 kb on + strand at 615.370 kb on + strand at 615.371 kb on - strand at 615.371 kb on - strand at 615.371 kb on - strand at 615.691 kb on + strand, within MPMX19_03271 at 615.691 kb on + strand, within MPMX19_03271 at 615.691 kb on + strand, within MPMX19_03271 at 615.691 kb on + strand, within MPMX19_03271 at 615.691 kb on + strand, within MPMX19_03271 at 615.691 kb on + strand, within MPMX19_03271 at 615.692 kb on - strand, within MPMX19_03271 at 615.692 kb on - strand, within MPMX19_03271 at 615.800 kb on - strand, within MPMX19_03271 at 615.800 kb on - strand, within MPMX19_03271 at 615.800 kb on - strand, within MPMX19_03271 at 615.800 kb on - strand, within MPMX19_03271 at 615.800 kb on - strand, within MPMX19_03271 at 615.815 kb on - strand, within MPMX19_03271 at 615.898 kb on + strand, within MPMX19_03271 at 615.899 kb on - strand, within MPMX19_03271 at 615.994 kb on + strand, within MPMX19_03271 at 615.994 kb on + strand, within MPMX19_03271 at 615.994 kb on + strand, within MPMX19_03271 at 615.994 kb on + strand, within MPMX19_03271 at 615.994 kb on + strand, within MPMX19_03271 at 615.994 kb on + strand, within MPMX19_03271 at 615.995 kb on - strand, within MPMX19_03271 at 615.995 kb on - strand, within MPMX19_03271 at 615.995 kb on - strand, within MPMX19_03271 at 616.063 kb on + strand, within MPMX19_03271 at 616.063 kb on + strand, within MPMX19_03271 at 616.063 kb on + strand, within MPMX19_03271 at 616.064 kb on - strand, within MPMX19_03271 at 616.064 kb on - strand, within MPMX19_03271 at 616.064 kb on - strand, within MPMX19_03271 at 616.064 kb on - strand, within MPMX19_03271 at 616.064 kb on - strand, within MPMX19_03271 at 616.064 kb on - strand, within MPMX19_03271 at 616.240 kb on + strand at 616.240 kb on + strand at 616.240 kb on + strand at 616.241 kb on - strand at 616.241 kb on - strand at 616.241 kb on - strand at 616.241 kb on - strand at 616.241 kb on - strand at 616.241 kb on - strand at 616.241 kb on - strand at 616.241 kb on - strand at 616.356 kb on + strand at 616.356 kb on + strand at 616.356 kb on + strand at 616.356 kb on + strand at 616.395 kb on + strand at 616.395 kb on + strand at 616.395 kb on + strand at 616.395 kb on + strand at 616.395 kb on + strand at 616.396 kb on - strand at 616.396 kb on - strand at 616.396 kb on - strand at 616.396 kb on - strand at 616.608 kb on + strand, within MPMX19_03272 at 616.608 kb on + strand, within MPMX19_03272 at 616.608 kb on + strand, within MPMX19_03272 at 616.608 kb on + strand, within MPMX19_03272 at 616.609 kb on - strand, within MPMX19_03272 at 616.609 kb on - strand, within MPMX19_03272 at 616.617 kb on + strand, within MPMX19_03272 at 616.618 kb on - strand, within MPMX19_03272 at 616.734 kb on + strand, within MPMX19_03272 at 616.734 kb on + strand, within MPMX19_03272 at 616.734 kb on + strand, within MPMX19_03272 at 616.923 kb on + strand, within MPMX19_03272 at 616.923 kb on + strand, within MPMX19_03272 at 616.923 kb on + strand, within MPMX19_03272 at 616.923 kb on + strand, within MPMX19_03272 at 616.923 kb on + strand, within MPMX19_03272 at 616.923 kb on + strand, within MPMX19_03272 at 616.923 kb on + strand, within MPMX19_03272 at 616.923 kb on + strand, within MPMX19_03272 at 616.923 kb on + strand, within MPMX19_03272 at 616.923 kb on + strand, within MPMX19_03272 at 616.923 kb on + strand, within MPMX19_03272 at 616.923 kb on + strand, within MPMX19_03272 at 616.923 kb on + strand, within MPMX19_03272 at 616.923 kb on + strand, within MPMX19_03272 at 616.923 kb on + strand, within MPMX19_03272 at 616.924 kb on - strand, within MPMX19_03272 at 616.924 kb on - strand, within MPMX19_03272 at 616.924 kb on - strand, within MPMX19_03272 at 616.924 kb on - strand, within MPMX19_03272 at 616.924 kb on - strand, within MPMX19_03272 at 616.924 kb on - strand, within MPMX19_03272 at 616.924 kb on - strand, within MPMX19_03272 at 616.924 kb on - strand, within MPMX19_03272 at 616.924 kb on - strand, within MPMX19_03272 at 616.924 kb on - strand, within MPMX19_03272 at 616.924 kb on - strand, within MPMX19_03272 at 617.022 kb on + strand, within MPMX19_03272 at 617.022 kb on + strand, within MPMX19_03272 at 617.022 kb on + strand, within MPMX19_03272 at 617.022 kb on + strand, within MPMX19_03272 at 617.022 kb on + strand, within MPMX19_03272 at 617.023 kb on - strand, within MPMX19_03272 at 617.232 kb on + strand, within MPMX19_03272 at 617.233 kb on - strand, within MPMX19_03272 at 617.233 kb on - strand, within MPMX19_03272 at 617.444 kb on + strand at 617.444 kb on + strand at 617.444 kb on + strand at 617.444 kb on + strand at 617.444 kb on + strand at 617.444 kb on + strand at 617.444 kb on + strand at 617.444 kb on + strand at 617.444 kb on + strand at 617.444 kb on + strand at 617.444 kb on + strand at 617.444 kb on + strand at 617.444 kb on + strand at 617.444 kb on + strand at 617.444 kb on + strand at 617.445 kb on - strand at 617.445 kb on - strand at 617.445 kb on - strand at 617.445 kb on - strand at 617.445 kb on - strand at 617.445 kb on - strand at 617.445 kb on - strand at 617.445 kb on - strand at 617.445 kb on - strand at 617.445 kb on - strand at 617.445 kb on - strand at 617.445 kb on - strand at 617.445 kb on - strand at 617.445 kb on - strand at 617.445 kb on - strand at 617.445 kb on - strand at 617.445 kb on - strand at 617.445 kb on - strand at 617.445 kb on - strand at 617.537 kb on + strand at 617.537 kb on + strand at 617.538 kb on - strand at 617.538 kb on - strand at 617.538 kb on - strand at 617.588 kb on + strand at 617.589 kb on - strand at 617.589 kb on - strand at 617.589 kb on - strand at 617.589 kb on - strand at 617.589 kb on - strand at 617.589 kb on - strand at 617.589 kb on - strand at 617.777 kb on + strand, within MPMX19_03273 at 617.777 kb on + strand, within MPMX19_03273 at 617.777 kb on + strand, within MPMX19_03273 at 617.777 kb on + strand, within MPMX19_03273 at 617.778 kb on - strand, within MPMX19_03273 at 617.778 kb on - strand, within MPMX19_03273 at 617.778 kb on - strand, within MPMX19_03273 at 617.813 kb on + strand, within MPMX19_03273 at 617.813 kb on + strand, within MPMX19_03273 at 617.814 kb on - strand, within MPMX19_03273 at 617.814 kb on - strand, within MPMX19_03273 at 617.814 kb on - strand, within MPMX19_03273 at 617.814 kb on - strand, within MPMX19_03273 at 617.814 kb on - strand, within MPMX19_03273 at 617.814 kb on - strand, within MPMX19_03273 at 617.948 kb on + strand, within MPMX19_03273 at 617.948 kb on + strand, within MPMX19_03273 at 617.948 kb on + strand, within MPMX19_03273 at 617.948 kb on + strand, within MPMX19_03273 at 617.949 kb on - strand, within MPMX19_03273 at 617.949 kb on - strand, within MPMX19_03273 at 617.949 kb on - strand, within MPMX19_03273 at 617.949 kb on - strand, within MPMX19_03273 at 617.949 kb on - strand, within MPMX19_03273 at 618.002 kb on + strand, within MPMX19_03273 at 618.003 kb on - strand, within MPMX19_03273 at 618.003 kb on - strand, within MPMX19_03273 at 618.003 kb on - strand, within MPMX19_03273 at 618.003 kb on - strand, within MPMX19_03273 at 618.003 kb on - strand, within MPMX19_03273 at 618.003 kb on - strand, within MPMX19_03273 at 618.003 kb on - strand, within MPMX19_03273 at 618.003 kb on - strand, within MPMX19_03273 at 618.003 kb on - strand, within MPMX19_03273 at 618.005 kb on + strand, within MPMX19_03273 at 618.005 kb on + strand, within MPMX19_03273 at 618.005 kb on + strand, within MPMX19_03273 at 618.006 kb on - strand, within MPMX19_03273 at 618.006 kb on - strand, within MPMX19_03273 at 618.056 kb on + strand, within MPMX19_03273 at 618.056 kb on + strand, within MPMX19_03273 at 618.057 kb on - strand, within MPMX19_03273 at 618.057 kb on - strand, within MPMX19_03273 at 618.077 kb on + strand, within MPMX19_03273 at 618.078 kb on - strand, within MPMX19_03273 at 618.107 kb on + strand, within MPMX19_03273 at 618.107 kb on + strand, within MPMX19_03273 at 618.107 kb on + strand, within MPMX19_03273 at 618.107 kb on + strand, within MPMX19_03273 at 618.107 kb on + strand, within MPMX19_03273 at 618.107 kb on + strand, within MPMX19_03273 at 618.107 kb on + strand, within MPMX19_03273 at 618.107 kb on + strand, within MPMX19_03273 at 618.107 kb on + strand, within MPMX19_03273 at 618.107 kb on + strand, within MPMX19_03273 at 618.108 kb on - strand, within MPMX19_03273 at 618.108 kb on - strand, within MPMX19_03273 at 618.108 kb on - strand, within MPMX19_03273 at 618.108 kb on - strand, within MPMX19_03273 at 618.108 kb on - strand, within MPMX19_03273 at 618.108 kb on - strand, within MPMX19_03273 at 618.108 kb on - strand, within MPMX19_03273 at 618.108 kb on - strand, within MPMX19_03273 at 618.108 kb on - strand, within MPMX19_03273 at 618.108 kb on - strand, within MPMX19_03273 at 618.108 kb on - strand, within MPMX19_03273 at 618.108 kb on - strand, within MPMX19_03273 at 618.265 kb on - strand, within MPMX19_03273 at 618.321 kb on - strand, within MPMX19_03273 at 618.321 kb on - strand, within MPMX19_03273 at 618.321 kb on - strand, within MPMX19_03273 at 618.321 kb on - strand, within MPMX19_03273 at 618.398 kb on - strand, within MPMX19_03273 at 618.398 kb on - strand, within MPMX19_03273 at 618.398 kb on - strand, within MPMX19_03273
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM; ambient oxygen remove 615,364 + -0.6 615,364 + -0.3 615,364 + -0.3 615,364 + -1.2 615,364 + +0.1 615,364 + -1.6 615,364 + -0.5 615,364 + -0.1 615,364 + -0.0 615,364 + -1.6 615,364 + +0.9 615,364 + +0.8 615,364 + -2.8 615,364 + -0.5 615,365 - -1.9 615,365 - -1.9 615,365 - +0.2 615,365 - -0.3 615,365 - -0.4 615,365 - +0.2 615,365 - +0.2 615,365 - -0.5 615,365 - -1.0 615,365 - +1.1 615,365 - -0.0 615,365 - -0.0 615,365 - +2.0 615,365 - -1.0 615,365 - -2.9 615,365 - -0.8 615,365 - -0.3 615,365 - +0.4 615,365 - +0.3 615,370 + +0.3 615,370 + +0.4 615,370 + -0.9 615,371 - -1.5 615,371 - +1.0 615,371 - -0.3 615,691 + MPMX19_03271 0.38 -1.7 615,691 + MPMX19_03271 0.38 -1.8 615,691 + MPMX19_03271 0.38 -0.8 615,691 + MPMX19_03271 0.38 -0.6 615,691 + MPMX19_03271 0.38 -0.3 615,691 + MPMX19_03271 0.38 -0.8 615,692 - MPMX19_03271 0.38 -0.8 615,692 - MPMX19_03271 0.38 -0.3 615,800 - MPMX19_03271 0.48 -2.3 615,800 - MPMX19_03271 0.48 -1.3 615,800 - MPMX19_03271 0.48 -0.9 615,800 - MPMX19_03271 0.48 -1.5 615,800 - MPMX19_03271 0.48 -1.1 615,815 - MPMX19_03271 0.50 -1.0 615,898 + MPMX19_03271 0.58 -2.2 615,899 - MPMX19_03271 0.58 -0.2 615,994 + MPMX19_03271 0.67 -0.5 615,994 + MPMX19_03271 0.67 -0.8 615,994 + MPMX19_03271 0.67 -0.5 615,994 + MPMX19_03271 0.67 +0.3 615,994 + MPMX19_03271 0.67 -0.5 615,994 + MPMX19_03271 0.67 +0.1 615,995 - MPMX19_03271 0.67 -0.1 615,995 - MPMX19_03271 0.67 -0.8 615,995 - MPMX19_03271 0.67 -0.6 616,063 + MPMX19_03271 0.73 -0.9 616,063 + MPMX19_03271 0.73 -2.5 616,063 + MPMX19_03271 0.73 +1.0 616,064 - MPMX19_03271 0.73 -0.0 616,064 - MPMX19_03271 0.73 -0.4 616,064 - MPMX19_03271 0.73 -0.3 616,064 - MPMX19_03271 0.73 -1.4 616,064 - MPMX19_03271 0.73 -0.2 616,064 - MPMX19_03271 0.73 -2.1 616,240 + -0.8 616,240 + +0.9 616,240 + -0.0 616,241 - -1.5 616,241 - -0.3 616,241 - -1.3 616,241 - -0.8 616,241 - -0.5 616,241 - -0.9 616,241 - -0.6 616,241 - -0.3 616,356 + +1.0 616,356 + -0.2 616,356 + +1.5 616,356 + +0.1 616,395 + +0.2 616,395 + -0.8 616,395 + -0.3 616,395 + +0.4 616,395 + -0.5 616,396 - -2.3 616,396 - -0.1 616,396 - -0.4 616,396 - -1.2 616,608 + MPMX19_03272 0.24 +0.2 616,608 + MPMX19_03272 0.24 +0.3 616,608 + MPMX19_03272 0.24 -1.3 616,608 + MPMX19_03272 0.24 -0.3 616,609 - MPMX19_03272 0.24 -1.1 616,609 - MPMX19_03272 0.24 +1.1 616,617 + MPMX19_03272 0.25 -0.8 616,618 - MPMX19_03272 0.25 -0.3 616,734 + MPMX19_03272 0.36 -0.7 616,734 + MPMX19_03272 0.36 +0.5 616,734 + MPMX19_03272 0.36 -0.3 616,923 + MPMX19_03272 0.54 -0.0 616,923 + MPMX19_03272 0.54 -0.9 616,923 + MPMX19_03272 0.54 +0.3 616,923 + MPMX19_03272 0.54 +0.0 616,923 + MPMX19_03272 0.54 -0.6 616,923 + MPMX19_03272 0.54 -0.3 616,923 + MPMX19_03272 0.54 -0.9 616,923 + MPMX19_03272 0.54 +1.8 616,923 + MPMX19_03272 0.54 -0.5 616,923 + MPMX19_03272 0.54 +1.3 616,923 + MPMX19_03272 0.54 -0.4 616,923 + MPMX19_03272 0.54 -0.8 616,923 + MPMX19_03272 0.54 -0.3 616,923 + MPMX19_03272 0.54 -0.2 616,923 + MPMX19_03272 0.54 -1.2 616,924 - MPMX19_03272 0.54 -0.8 616,924 - MPMX19_03272 0.54 -0.1 616,924 - MPMX19_03272 0.54 -1.5 616,924 - MPMX19_03272 0.54 -0.8 616,924 - MPMX19_03272 0.54 -0.8 616,924 - MPMX19_03272 0.54 -0.4 616,924 - MPMX19_03272 0.54 -0.5 616,924 - MPMX19_03272 0.54 -0.7 616,924 - MPMX19_03272 0.54 +0.1 616,924 - MPMX19_03272 0.54 -0.8 616,924 - MPMX19_03272 0.54 -1.1 617,022 + MPMX19_03272 0.64 -0.3 617,022 + MPMX19_03272 0.64 +0.0 617,022 + MPMX19_03272 0.64 +0.2 617,022 + MPMX19_03272 0.64 -1.0 617,022 + MPMX19_03272 0.64 +0.5 617,023 - MPMX19_03272 0.64 -1.0 617,232 + MPMX19_03272 0.84 -0.1 617,233 - MPMX19_03272 0.84 -0.9 617,233 - MPMX19_03272 0.84 -0.5 617,444 + -2.0 617,444 + -0.3 617,444 + -0.1 617,444 + +0.1 617,444 + +0.7 617,444 + +0.9 617,444 + +0.7 617,444 + +0.5 617,444 + +0.5 617,444 + -0.9 617,444 + +1.5 617,444 + -0.5 617,444 + +0.1 617,444 + -0.7 617,444 + -1.3 617,445 - -0.2 617,445 - +0.7 617,445 - -0.9 617,445 - +0.0 617,445 - -1.3 617,445 - -0.5 617,445 - +0.1 617,445 - +0.3 617,445 - -0.2 617,445 - -1.2 617,445 - -1.0 617,445 - -0.2 617,445 - -1.0 617,445 - -0.7 617,445 - -0.2 617,445 - +0.5 617,445 - +1.5 617,445 - +0.2 617,445 - -0.9 617,537 + +0.5 617,537 + +0.5 617,538 - -0.1 617,538 - -0.6 617,538 - +0.1 617,588 + -0.0 617,589 - +0.4 617,589 - -0.6 617,589 - +0.3 617,589 - +0.9 617,589 - -1.0 617,589 - +0.1 617,589 - -0.5 617,777 + MPMX19_03273 0.16 -1.0 617,777 + MPMX19_03273 0.16 -0.9 617,777 + MPMX19_03273 0.16 +1.5 617,777 + MPMX19_03273 0.16 -1.3 617,778 - MPMX19_03273 0.16 -1.2 617,778 - MPMX19_03273 0.16 -0.4 617,778 - MPMX19_03273 0.16 -1.6 617,813 + MPMX19_03273 0.18 +0.2 617,813 + MPMX19_03273 0.18 -0.9 617,814 - MPMX19_03273 0.18 -0.3 617,814 - MPMX19_03273 0.18 +0.2 617,814 - MPMX19_03273 0.18 +0.1 617,814 - MPMX19_03273 0.18 -0.3 617,814 - MPMX19_03273 0.18 -1.0 617,814 - MPMX19_03273 0.18 -0.8 617,948 + MPMX19_03273 0.23 -0.5 617,948 + MPMX19_03273 0.23 +0.4 617,948 + MPMX19_03273 0.23 -0.1 617,948 + MPMX19_03273 0.23 +0.1 617,949 - MPMX19_03273 0.23 -0.8 617,949 - MPMX19_03273 0.23 -0.3 617,949 - MPMX19_03273 0.23 -0.2 617,949 - MPMX19_03273 0.23 -0.3 617,949 - MPMX19_03273 0.23 +0.1 618,002 + MPMX19_03273 0.26 -1.2 618,003 - MPMX19_03273 0.26 +0.3 618,003 - MPMX19_03273 0.26 +2.3 618,003 - MPMX19_03273 0.26 +0.4 618,003 - MPMX19_03273 0.26 +0.2 618,003 - MPMX19_03273 0.26 +0.5 618,003 - MPMX19_03273 0.26 +1.1 618,003 - MPMX19_03273 0.26 -0.8 618,003 - MPMX19_03273 0.26 +1.5 618,003 - MPMX19_03273 0.26 +1.2 618,005 + MPMX19_03273 0.26 -0.8 618,005 + MPMX19_03273 0.26 +1.5 618,005 + MPMX19_03273 0.26 -1.3 618,006 - MPMX19_03273 0.26 -0.6 618,006 - MPMX19_03273 0.26 -2.5 618,056 + MPMX19_03273 0.28 -0.6 618,056 + MPMX19_03273 0.28 +0.3 618,057 - MPMX19_03273 0.28 -0.6 618,057 - MPMX19_03273 0.28 +0.2 618,077 + MPMX19_03273 0.29 -0.0 618,078 - MPMX19_03273 0.29 -0.0 618,107 + MPMX19_03273 0.30 -0.5 618,107 + MPMX19_03273 0.30 -0.5 618,107 + MPMX19_03273 0.30 -0.9 618,107 + MPMX19_03273 0.30 +0.2 618,107 + MPMX19_03273 0.30 +1.5 618,107 + MPMX19_03273 0.30 +0.3 618,107 + MPMX19_03273 0.30 -1.6 618,107 + MPMX19_03273 0.30 -0.9 618,107 + MPMX19_03273 0.30 -0.9 618,107 + MPMX19_03273 0.30 +0.1 618,108 - MPMX19_03273 0.30 +0.5 618,108 - MPMX19_03273 0.30 -0.0 618,108 - MPMX19_03273 0.30 +0.5 618,108 - MPMX19_03273 0.30 -0.0 618,108 - MPMX19_03273 0.30 -0.8 618,108 - MPMX19_03273 0.30 -0.9 618,108 - MPMX19_03273 0.30 +0.3 618,108 - MPMX19_03273 0.30 -0.0 618,108 - MPMX19_03273 0.30 -0.5 618,108 - MPMX19_03273 0.30 +0.4 618,108 - MPMX19_03273 0.30 -1.3 618,108 - MPMX19_03273 0.30 -2.9 618,265 - MPMX19_03273 0.37 -0.3 618,321 - MPMX19_03273 0.39 -0.9 618,321 - MPMX19_03273 0.39 +0.2 618,321 - MPMX19_03273 0.39 -0.0 618,321 - MPMX19_03273 0.39 -0.4 618,398 - MPMX19_03273 0.42 -1.9 618,398 - MPMX19_03273 0.42 -1.8 618,398 - MPMX19_03273 0.42 +0.6
Or see this region's nucleotide sequence