Strain Fitness in Azospirillum sp. SherDot2

Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01443

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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Per-strain Table

Position	Strand	LocusTag	Fraction	NL-CCM; ambient oxygen
				remove
1,515,222	-	MPMX19_01442	0.56	-0.2
1,515,233	+	MPMX19_01442	0.57	-0.6
1,515,233	+	MPMX19_01442	0.57	-0.4
1,515,233	+	MPMX19_01442	0.57	+0.2
1,515,234	-	MPMX19_01442	0.57	+0.9
1,515,254	+	MPMX19_01442	0.58	+0.7
1,515,254	+	MPMX19_01442	0.58	+0.1
1,515,254	+	MPMX19_01442	0.58	-0.1
1,515,254	+	MPMX19_01442	0.58	+0.3
1,515,254	+	MPMX19_01442	0.58	-0.6
1,515,254	+	MPMX19_01442	0.58	-0.1
1,515,255	-	MPMX19_01442	0.58	-1.3
1,515,255	-	MPMX19_01442	0.58	+0.9
1,515,255	-	MPMX19_01442	0.58	-0.8
1,515,255	-	MPMX19_01442	0.58	-1.1
1,515,255	-	MPMX19_01442	0.58	-0.2
1,515,255	-	MPMX19_01442	0.58	+0.5
1,515,255	-	MPMX19_01442	0.58	-1.9
1,515,255	-	MPMX19_01442	0.58	-0.4
1,515,255	-	MPMX19_01442	0.58	+0.2
1,515,255	-	MPMX19_01442	0.58	-0.1
1,515,255	-	MPMX19_01442	0.58	-0.7
1,515,270	-	MPMX19_01442	0.59	-0.7
1,515,314	+	MPMX19_01442	0.62	+0.0
1,515,314	+	MPMX19_01442	0.62	+0.9
1,515,314	+	MPMX19_01442	0.62	-0.1
1,515,314	+	MPMX19_01442	0.62	-0.6
1,515,315	-	MPMX19_01442	0.62	+1.4
1,515,315	-	MPMX19_01442	0.62	-0.1
1,515,315	-	MPMX19_01442	0.62	-0.1
1,515,329	+	MPMX19_01442	0.63	-0.3
1,515,329	+	MPMX19_01442	0.63	-0.8
1,515,344	+	MPMX19_01442	0.64	-1.8
1,515,345	-	MPMX19_01442	0.65	+0.3
1,515,359	+	MPMX19_01442	0.65	-0.6
1,515,359	+	MPMX19_01442	0.65	-0.2
1,515,359	+	MPMX19_01442	0.65	-1.6
1,515,360	-	MPMX19_01442	0.66	+1.7
1,515,360	-	MPMX19_01442	0.66	-0.2
1,515,360	-	MPMX19_01442	0.66	+0.6
1,515,360	-	MPMX19_01442	0.66	-1.5
1,515,389	+	MPMX19_01442	0.67	+0.1
1,515,389	+	MPMX19_01442	0.67	+0.8
1,515,389	+	MPMX19_01442	0.67	-0.4
1,515,389	+	MPMX19_01442	0.67	-1.9
1,515,389	+	MPMX19_01442	0.67	+0.5
1,515,389	+	MPMX19_01442	0.67	+1.9
1,515,389	+	MPMX19_01442	0.67	-0.2
1,515,389	+	MPMX19_01442	0.67	-2.6
1,515,389	+	MPMX19_01442	0.67	+1.2
1,515,389	+	MPMX19_01442	0.67	-1.6
1,515,389	+	MPMX19_01442	0.67	+0.6
1,515,389	+	MPMX19_01442	0.67	+0.2
1,515,389	+	MPMX19_01442	0.67	-1.6
1,515,389	+	MPMX19_01442	0.67	+0.4
1,515,389	+	MPMX19_01442	0.67	+0.2
1,515,389	+	MPMX19_01442	0.67	-1.5
1,515,389	+	MPMX19_01442	0.67	+0.3
1,515,389	+	MPMX19_01442	0.67	-0.8
1,515,389	+	MPMX19_01442	0.67	+0.1
1,515,389	+	MPMX19_01442	0.67	-0.3
1,515,389	+	MPMX19_01442	0.67	-2.3
1,515,389	+	MPMX19_01442	0.67	-0.8
1,515,389	+	MPMX19_01442	0.67	-0.7
1,515,389	+	MPMX19_01442	0.67	+0.1
1,515,389	+	MPMX19_01442	0.67	+0.1
1,515,389	+	MPMX19_01442	0.67	-0.2
1,515,389	+	MPMX19_01442	0.67	-0.2
1,515,390	-	MPMX19_01442	0.68	+0.1
1,515,390	-	MPMX19_01442	0.68	-0.9
1,515,390	-	MPMX19_01442	0.68	+1.0
1,515,390	-	MPMX19_01442	0.68	-0.0
1,515,390	-	MPMX19_01442	0.68	-1.7
1,515,390	-	MPMX19_01442	0.68	-0.8
1,515,390	-	MPMX19_01442	0.68	-0.2
1,515,390	-	MPMX19_01442	0.68	-0.3
1,515,390	-	MPMX19_01442	0.68	+0.8
1,515,390	-	MPMX19_01442	0.68	-0.1
1,515,390	-	MPMX19_01442	0.68	+1.0
1,515,390	-	MPMX19_01442	0.68	-0.3
1,515,390	-	MPMX19_01442	0.68	-1.8
1,515,390	-	MPMX19_01442	0.68	+1.1
1,515,390	-	MPMX19_01442	0.68	-0.3
1,515,390	-	MPMX19_01442	0.68	+1.5
1,515,390	-	MPMX19_01442	0.68	-0.9
1,515,390	-	MPMX19_01442	0.68	-0.1
1,515,390	-	MPMX19_01442	0.68	-0.8
1,515,425	+	MPMX19_01442	0.70	-0.3
1,515,425	+	MPMX19_01442	0.70	-0.1
1,515,426	-	MPMX19_01442	0.70	+0.9
1,515,434	+	MPMX19_01442	0.71	+0.3
1,515,434	+	MPMX19_01442	0.71	-0.3
1,515,435	-	MPMX19_01442	0.71	+0.5
1,515,461	+	MPMX19_01442	0.72	-0.1
1,515,462	-	MPMX19_01442	0.72	+0.7
1,515,462	-	MPMX19_01442	0.72	+0.3
1,515,473	+	MPMX19_01442	0.73	+1.0
1,515,473	+	MPMX19_01442	0.73	-0.8
1,515,473	+	MPMX19_01442	0.73	+1.0
1,515,474	-	MPMX19_01442	0.73	-0.5
1,515,474	-	MPMX19_01442	0.73	-0.1
1,515,518	+	MPMX19_01442	0.76	+0.2
1,515,518	+	MPMX19_01442	0.76	-0.5
1,515,518	+	MPMX19_01442	0.76	+0.7
1,515,518	+	MPMX19_01442	0.76	-0.1
1,515,518	+	MPMX19_01442	0.76	+0.2
1,515,518	+	MPMX19_01442	0.76	+0.1
1,515,518	+	MPMX19_01442	0.76	+0.1
1,515,518	+	MPMX19_01442	0.76	-0.6
1,515,519	-	MPMX19_01442	0.76	+0.9
1,515,519	-	MPMX19_01442	0.76	-0.6
1,515,519	-	MPMX19_01442	0.76	-0.9
1,515,519	-	MPMX19_01442	0.76	+1.5
1,515,563	+	MPMX19_01442	0.79	-0.1
1,515,564	-	MPMX19_01442	0.79	+1.2
1,515,564	-	MPMX19_01442	0.79	-0.3
1,515,564	-	MPMX19_01442	0.79	+0.1
1,515,564	-	MPMX19_01442	0.79	-0.3
1,515,564	-	MPMX19_01442	0.79	+0.4
1,515,564	-	MPMX19_01442	0.79	-1.9
1,515,564	-	MPMX19_01442	0.79	+0.4
1,515,674	+	MPMX19_01442	0.87	-1.1
1,515,674	+	MPMX19_01442	0.87	+0.5
1,515,674	+	MPMX19_01442	0.87	+0.2
1,515,674	+	MPMX19_01442	0.87	-0.6
1,515,674	+	MPMX19_01442	0.87	-0.2
1,515,674	+	MPMX19_01442	0.87	-0.8
1,515,674	+	MPMX19_01442	0.87	+0.1
1,515,674	+	MPMX19_01442	0.87	-0.4
1,515,674	+	MPMX19_01442	0.87	-0.1
1,515,674	+	MPMX19_01442	0.87	-0.1
1,515,674	+	MPMX19_01442	0.87	+0.1
1,515,674	+	MPMX19_01442	0.87	-0.8
1,515,674	+	MPMX19_01442	0.87	+0.2
1,515,674	+	MPMX19_01442	0.87	-0.1
1,515,674	+	MPMX19_01442	0.87	-1.6
1,515,674	+	MPMX19_01442	0.87	-1.0
1,515,674	+	MPMX19_01442	0.87	-1.3
1,515,674	+	MPMX19_01442	0.87	-0.2
1,515,674	+	MPMX19_01442	0.87	-0.7
1,515,674	+	MPMX19_01442	0.87	+0.2
1,515,674	+	MPMX19_01442	0.87	+0.3
1,515,674	+	MPMX19_01442	0.87	+0.2
1,515,674	+	MPMX19_01442	0.87	+0.4
1,515,674	+	MPMX19_01442	0.87	-0.2
1,515,674	+	MPMX19_01442	0.87	-2.6
1,515,674	+	MPMX19_01442	0.87	+0.2
1,515,674	+	MPMX19_01442	0.87	-2.1
1,515,675	-	MPMX19_01442	0.87	-0.2
1,515,675	-	MPMX19_01442	0.87	-0.1
1,515,675	-	MPMX19_01442	0.87	-0.5
1,515,675	-	MPMX19_01442	0.87	-1.4
1,515,675	-	MPMX19_01442	0.87	+0.8
1,515,675	-	MPMX19_01442	0.87	+0.5
1,515,675	-	MPMX19_01442	0.87	-0.2
1,515,675	-	MPMX19_01442	0.87	+0.8
1,515,675	-	MPMX19_01442	0.87	-0.2
1,515,675	-	MPMX19_01442	0.87	-0.4
1,515,675	-	MPMX19_01442	0.87	+0.5
1,515,675	-	MPMX19_01442	0.87	+0.9
1,515,675	-	MPMX19_01442	0.87	-0.6
1,515,675	-	MPMX19_01442	0.87	-1.5
1,515,675	-	MPMX19_01442	0.87	-0.2
1,515,675	-	MPMX19_01442	0.87	+0.0
1,515,675	-	MPMX19_01442	0.87	-1.9
1,515,675	-	MPMX19_01442	0.87	-1.2
1,515,675	-	MPMX19_01442	0.87	-0.2
1,515,675	-	MPMX19_01442	0.87	-0.2
1,515,675	-	MPMX19_01442	0.87	-0.8
1,515,675	-	MPMX19_01442	0.87	-0.9
1,515,675	-	MPMX19_01442	0.87	+1.5
1,515,758	+			-0.8
1,515,759	-			+0.3
1,515,759	-			-1.8
1,515,759	-			+1.3
1,515,759	-			-0.8
1,515,759	-			-0.2
1,515,861	-			+0.9
1,516,064	+			-0.5
1,516,064	+			+0.9
1,516,064	+			-0.5
1,516,064	+			-1.9
1,516,064	+			-0.5
1,516,064	+			+0.1
1,516,064	+			-0.8
1,516,065	-			-1.1
1,516,065	-			-1.6
1,516,065	-			-1.3
1,516,065	-			+0.9
1,516,065	-			-2.3
1,516,065	-			+0.5
1,516,065	-			-0.5
1,516,065	-			-2.5
1,516,065	-			+0.1
1,516,065	-			+0.5
1,516,139	-			+0.4
1,516,139	-			+0.1
1,516,207	+	MPMX19_01443	0.17	-0.9
1,516,207	+	MPMX19_01443	0.17	-0.6
1,516,207	+	MPMX19_01443	0.17	-0.5
1,516,207	+	MPMX19_01443	0.17	-0.1
1,516,207	+	MPMX19_01443	0.17	+0.2
1,516,207	+	MPMX19_01443	0.17	-2.0
1,516,207	+	MPMX19_01443	0.17	+0.2
1,516,208	-	MPMX19_01443	0.18	+0.0
1,516,208	-	MPMX19_01443	0.18	-0.5
1,516,208	-	MPMX19_01443	0.18	-0.1
1,516,208	-	MPMX19_01443	0.18	-0.7
1,516,208	-	MPMX19_01443	0.18	-1.5
1,516,208	-	MPMX19_01443	0.18	-1.3
1,516,208	-	MPMX19_01443	0.18	-1.4
1,516,208	-	MPMX19_01443	0.18	-1.8
1,516,208	-	MPMX19_01443	0.18	+0.1
1,516,208	-	MPMX19_01443	0.18	-0.8
1,516,208	-	MPMX19_01443	0.18	-0.1
1,516,252	+	MPMX19_01443	0.29	-0.8
1,516,252	+	MPMX19_01443	0.29	+0.3
1,516,253	-	MPMX19_01443	0.29	+0.1
1,516,253	-	MPMX19_01443	0.29	+0.4
1,516,253	-	MPMX19_01443	0.29	-1.2
1,516,253	-	MPMX19_01443	0.29	-0.9
1,516,253	-	MPMX19_01443	0.29	-0.5
1,516,253	-	MPMX19_01443	0.29	+0.9
1,516,253	-	MPMX19_01443	0.29	-0.2
1,516,253	-	MPMX19_01443	0.29	-0.1
1,516,253	-	MPMX19_01443	0.29	-1.1
1,516,253	-	MPMX19_01443	0.29	+0.3
1,516,462	+	MPMX19_01443	0.81	+0.9
1,516,462	+	MPMX19_01443	0.81	+0.3
1,516,462	+	MPMX19_01443	0.81	-1.3
1,516,463	-	MPMX19_01443	0.81	+0.6
1,516,463	-	MPMX19_01443	0.81	-1.1
1,516,598	+			-1.0
1,516,598	+			+2.0
1,516,598	+			-1.6
1,516,598	+			-0.4
1,516,598	+			-1.2
1,516,598	+			+0.4
1,516,599	-			+0.1
1,516,599	-			+0.8
1,516,599	-			+0.7
1,516,599	-			-0.7
1,516,599	-			-0.0
1,516,599	-			-0.3
1,516,599	-			+0.3
1,516,599	-			+0.5
1,516,599	-			+0.2
1,516,794	+	MPMX19_01444	0.52	-1.1
1,516,794	+	MPMX19_01444	0.52	-1.4
1,516,794	+	MPMX19_01444	0.52	+0.2
1,516,794	+	MPMX19_01444	0.52	-0.8
1,516,794	+	MPMX19_01444	0.52	-0.4
1,516,794	+	MPMX19_01444	0.52	+1.5
1,516,794	+	MPMX19_01444	0.52	+0.5
1,516,794	+	MPMX19_01444	0.52	-0.7
1,516,794	+	MPMX19_01444	0.52	-2.5
1,516,794	+	MPMX19_01444	0.52	-1.3
1,516,794	+	MPMX19_01444	0.52	-0.1
1,516,794	+	MPMX19_01444	0.52	-0.8
1,516,794	+	MPMX19_01444	0.52	-1.2
1,516,794	+	MPMX19_01444	0.52	+0.7
1,516,794	+	MPMX19_01444	0.52	-0.5
1,516,794	+	MPMX19_01444	0.52	-0.8
1,516,794	+	MPMX19_01444	0.52	-0.6
1,516,794	+	MPMX19_01444	0.52	-1.0
1,516,794	+	MPMX19_01444	0.52	-0.9
1,516,794	+	MPMX19_01444	0.52	-1.3
1,516,794	+	MPMX19_01444	0.52	-1.1
1,516,794	+	MPMX19_01444	0.52	+0.1
1,516,794	+	MPMX19_01444	0.52	+0.2
1,516,794	+	MPMX19_01444	0.52	+0.4
1,516,794	+	MPMX19_01444	0.52	-1.0
1,516,794	+	MPMX19_01444	0.52	-1.9
1,516,794	+	MPMX19_01444	0.52	-1.3
1,516,795	-	MPMX19_01444	0.52	-0.0
1,516,795	-	MPMX19_01444	0.52	-0.0
1,516,795	-	MPMX19_01444	0.52	+0.3
1,516,795	-	MPMX19_01444	0.52	+0.8
1,516,795	-	MPMX19_01444	0.52	+0.0
1,516,795	-	MPMX19_01444	0.52	+0.1
1,516,795	-	MPMX19_01444	0.52	+1.0
1,516,795	-	MPMX19_01444	0.52	+0.7
1,516,795	-	MPMX19_01444	0.52	+0.2
1,516,795	-	MPMX19_01444	0.52	-1.6
1,516,795	-	MPMX19_01444	0.52	-0.6
1,516,948	+			+0.7
1,516,948	+			-0.0
1,516,948	+			+0.2
1,516,948	+			+0.3
1,516,949	-			-0.2
1,516,984	+			-2.5
1,516,985	-			-0.0
1,516,985	-			-0.8
1,516,986	+			-0.2
1,516,986	+			+1.3
1,516,986	+			+0.4
1,516,986	+			-1.4
1,516,986	+			-1.3
1,516,986	+			+0.5
1,516,986	+			-0.6
1,516,986	+			+0.5
1,516,986	+			-1.5
1,516,986	+			-0.4
1,516,986	+			-0.4
1,516,986	+			-1.1
1,516,986	+			+0.5
1,516,986	+			+0.5
1,516,986	+			+0.3
1,516,986	+			-0.5
1,516,986	+			-0.1
1,516,986	+			+0.7
1,516,986	+			+0.2
1,516,986	+			+0.2
1,516,986	+			-0.3
1,516,986	+			+1.4
1,516,986	+			+0.4
1,516,986	+			+0.1
1,516,986	+			-0.6
1,516,986	+			-0.8
1,516,986	+			-1.1
1,516,986	+			+1.1
1,516,986	+			-0.6
1,516,986	+			-0.4
1,516,986	+			-0.6
1,516,986	+			+0.2
1,516,986	+			-0.4
1,516,986	+			+0.1
1,516,986	+			-0.5
1,516,986	+			-0.0
1,516,986	+			-0.2
1,516,986	+			-0.1
1,516,986	+			-1.0
1,516,986	+			+0.9
1,516,986	+			+1.8
1,516,986	+			-2.3
1,516,986	+			+0.3
1,516,986	+			-0.8
1,516,986	+			+0.7
1,516,986	+			-0.4
1,516,986	+			-0.0
1,516,986	+			-1.1
1,516,986	+			-1.0
1,516,986	+			+0.3
1,516,986	+			-1.6
1,516,986	+			-0.4
1,516,986	+			+1.1
1,516,986	+			-0.8
1,516,986	+			-0.2
1,516,986	+			+0.1
1,516,986	+			-0.5
1,516,986	+			-0.3
1,516,986	+			-2.3
1,516,986	+			+0.2
1,516,986	+			+0.0
1,516,986	+			-0.3
1,516,987	-			-0.5
1,516,987	-			-1.5
1,516,987	-			-1.4
1,516,987	-			-1.6
1,516,987	-			+1.0
1,516,987	-			-0.2
1,516,987	-			+1.0
1,516,987	-			-0.3
1,516,987	-			-0.1
1,516,987	-			-0.9
1,516,987	-			-0.9
1,516,987	-			+1.5
1,516,987	-			-0.5
1,516,987	-			-1.3
1,516,987	-			-0.6
1,516,987	-			-2.0
1,516,987	-			+0.2
1,516,987	-			+1.2
1,516,987	-			-0.6
1,516,987	-			-0.8
1,516,987	-			+0.3
1,516,987	-			-0.6
1,516,987	-			-0.5
1,516,987	-			-0.3
1,516,987	-			-0.3
1,516,987	-			+0.5
1,516,987	-			-0.6
1,516,987	-			-1.6
1,516,987	-			-1.5
1,516,987	-			+0.5
1,516,987	-			-0.2
1,516,987	-			-0.5
1,516,987	-			+0.4
1,516,987	-			-0.5
1,516,987	-			+0.3
1,516,987	-			+0.7
1,516,987	-			+1.2
1,516,987	-			-1.6
1,516,987	-			+1.3
1,516,987	-			+0.1
1,516,987	-			-1.3
1,516,987	-			-0.3
1,516,987	-			+0.2
1,516,987	-			+0.5
1,516,987	-			-0.3
1,516,987	-			-0.5
1,516,987	-			-0.2
1,516,987	-			-1.1
1,516,987	-			+0.4
1,516,987	-			+1.4
1,516,987	-			-1.2
1,516,987	-			-1.0
1,516,987	-			-1.6
1,516,987	-			-1.1
1,516,987	-			-1.0
1,516,987	-			+1.0
1,516,987	-			-1.5
1,516,987	-			-0.2
1,516,987	-			-0.9
1,516,987	-			-0.6
1,516,987	-			+1.1
1,516,987	-			+0.0
1,516,987	-			+0.5
1,516,987	-			+1.0
1,516,987	-			+0.0
1,516,987	-			+1.5
1,517,022	+			+0.2
1,517,022	+			+2.0
1,517,023	-			+1.1
1,517,073	+			-0.5
1,517,073	+			-0.0
1,517,073	+			-0.1
1,517,073	+			+1.0
1,517,073	+			-0.4
1,517,073	+			-1.8
1,517,073	+			-0.3
1,517,073	+			-1.6
1,517,073	+			+0.5
1,517,073	+			-0.0
1,517,073	+			-1.5
1,517,073	+			+0.2
1,517,073	+			-0.6
1,517,073	+			-2.0
1,517,073	+			+1.8
1,517,073	+			-0.8
1,517,073	+			-0.6
1,517,073	+			+0.5
1,517,073	+			-0.1
1,517,073	+			+0.8
1,517,073	+			-1.0
1,517,073	+			-1.5
1,517,073	+			-1.0
1,517,074	-			+0.6
1,517,074	-			-0.8
1,517,074	-			+1.0
1,517,074	-			-0.9
1,517,074	-			-0.6
1,517,074	-			+0.5
1,517,074	-			-0.4
1,517,074	-			-1.3
1,517,074	-			-1.3
1,517,074	-			-0.8
1,517,074	-			-0.4
1,517,074	-			+0.4
1,517,074	-			+0.2
1,517,074	-			-1.0
1,517,074	-			+0.4
1,517,074	-			+0.3
1,517,074	-			-1.3
1,517,074	-			-1.5
1,517,074	-			-1.7
1,517,074	-			-1.5
1,517,074	-			+0.8
1,517,074	-			+0.4
1,517,074	-			-0.2
1,517,074	-			-0.8
1,517,175	+			-0.5
1,517,176	-			-0.2
1,517,176	-			-0.5
1,517,176	-			+0.6
1,517,176	-			+0.1
1,517,176	-			-1.9
1,517,271	+	MPMX19_01445	0.22	+0.7
1,517,406	+	MPMX19_01445	0.52	-1.0
1,517,406	+	MPMX19_01445	0.52	+0.4
1,517,407	-	MPMX19_01445	0.52	+0.4
1,517,526	+	MPMX19_01445	0.79	-0.4
1,517,526	+	MPMX19_01445	0.79	+1.1
1,517,526	+	MPMX19_01445	0.79	+1.2
1,517,527	-	MPMX19_01445	0.80	+0.4
1,517,527	-	MPMX19_01445	0.80	-0.4

Or see this region's nucleotide sequence