Experiment: NL-CCM; ambient oxygen
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00689 and MPMX19_00690 are separated by 73 nucleotides MPMX19_00690 and MPMX19_00691 are separated by 399 nucleotides MPMX19_00691 and MPMX19_00692 are separated by 4 nucleotides
MPMX19_00689: MPMX19_00689 - Glyceraldehyde-3-phosphate dehydrogenase 1, at 711,081 to 712,103
_00689
MPMX19_00690: MPMX19_00690 - Transketolase 1, at 712,177 to 714,171
_00690
MPMX19_00691: MPMX19_00691 - hypothetical protein, at 714,571 to 714,795
_00691
MPMX19_00692: MPMX19_00692 - hypothetical protein, at 714,800 to 715,108
_00692
Position (kb) 712
713
714
715 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 711.259 kb on + strand, within MPMX19_00689 at 711.259 kb on + strand, within MPMX19_00689 at 711.259 kb on + strand, within MPMX19_00689 at 711.259 kb on + strand, within MPMX19_00689 at 711.260 kb on - strand, within MPMX19_00689 at 711.260 kb on - strand, within MPMX19_00689 at 711.260 kb on - strand, within MPMX19_00689 at 711.260 kb on - strand, within MPMX19_00689 at 712.039 kb on + strand at 712.039 kb on + strand at 712.096 kb on - strand at 712.179 kb on - strand at 714.404 kb on - strand at 714.410 kb on + strand at 714.411 kb on - strand at 714.411 kb on - strand at 714.473 kb on + strand at 714.473 kb on + strand at 714.473 kb on + strand at 714.473 kb on + strand at 714.473 kb on + strand at 714.473 kb on + strand at 714.473 kb on + strand at 714.474 kb on - strand at 714.474 kb on - strand at 714.474 kb on - strand at 714.474 kb on - strand at 714.474 kb on - strand at 714.474 kb on - strand at 714.485 kb on + strand at 714.836 kb on + strand, within MPMX19_00692 at 714.836 kb on + strand, within MPMX19_00692 at 714.836 kb on + strand, within MPMX19_00692 at 714.836 kb on + strand, within MPMX19_00692 at 714.836 kb on + strand, within MPMX19_00692 at 714.836 kb on + strand, within MPMX19_00692 at 714.836 kb on + strand, within MPMX19_00692 at 714.836 kb on + strand, within MPMX19_00692 at 714.836 kb on + strand, within MPMX19_00692 at 714.837 kb on - strand, within MPMX19_00692 at 714.837 kb on - strand, within MPMX19_00692 at 714.837 kb on - strand, within MPMX19_00692 at 714.837 kb on - strand, within MPMX19_00692 at 714.837 kb on - strand, within MPMX19_00692 at 714.837 kb on - strand, within MPMX19_00692 at 714.890 kb on + strand, within MPMX19_00692 at 714.890 kb on + strand, within MPMX19_00692 at 714.890 kb on + strand, within MPMX19_00692 at 714.890 kb on + strand, within MPMX19_00692 at 714.890 kb on + strand, within MPMX19_00692 at 714.890 kb on + strand, within MPMX19_00692 at 714.890 kb on + strand, within MPMX19_00692 at 714.890 kb on + strand, within MPMX19_00692 at 714.890 kb on + strand, within MPMX19_00692 at 714.890 kb on + strand, within MPMX19_00692 at 714.890 kb on + strand, within MPMX19_00692 at 714.890 kb on + strand, within MPMX19_00692 at 714.890 kb on + strand, within MPMX19_00692 at 714.890 kb on + strand, within MPMX19_00692 at 714.890 kb on + strand, within MPMX19_00692 at 714.890 kb on + strand, within MPMX19_00692 at 714.890 kb on + strand, within MPMX19_00692 at 714.890 kb on + strand, within MPMX19_00692 at 714.891 kb on - strand, within MPMX19_00692 at 714.891 kb on - strand, within MPMX19_00692 at 714.891 kb on - strand, within MPMX19_00692 at 714.891 kb on - strand, within MPMX19_00692 at 714.891 kb on - strand, within MPMX19_00692 at 714.891 kb on - strand, within MPMX19_00692 at 714.891 kb on - strand, within MPMX19_00692 at 714.891 kb on - strand, within MPMX19_00692 at 714.891 kb on - strand, within MPMX19_00692 at 714.891 kb on - strand, within MPMX19_00692 at 714.891 kb on - strand, within MPMX19_00692 at 714.891 kb on - strand, within MPMX19_00692 at 714.891 kb on - strand, within MPMX19_00692 at 715.106 kb on + strand at 715.106 kb on + strand at 715.106 kb on + strand at 715.106 kb on + strand at 715.106 kb on + strand at 715.106 kb on + strand at 715.107 kb on - strand at 715.107 kb on - strand at 715.107 kb on - strand at 715.107 kb on - strand at 715.107 kb on - strand at 715.107 kb on - strand at 715.107 kb on - strand at 715.107 kb on - strand at 715.107 kb on - strand at 715.114 kb on + strand at 715.114 kb on + strand at 715.114 kb on + strand at 715.114 kb on + strand at 715.114 kb on + strand at 715.114 kb on + strand at 715.114 kb on + strand at 715.115 kb on - strand at 715.115 kb on - strand at 715.115 kb on - strand at 715.152 kb on + strand at 715.152 kb on + strand at 715.152 kb on + strand at 715.153 kb on - strand at 715.153 kb on - strand at 715.153 kb on - strand at 715.153 kb on - strand at 715.153 kb on - strand at 715.153 kb on - strand at 715.153 kb on - strand at 715.153 kb on - strand at 715.153 kb on - strand at 715.153 kb on - strand at 715.153 kb on - strand at 715.153 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM; ambient oxygen remove 711,259 + MPMX19_00689 0.17 -0.5 711,259 + MPMX19_00689 0.17 -0.2 711,259 + MPMX19_00689 0.17 -0.2 711,259 + MPMX19_00689 0.17 -2.1 711,260 - MPMX19_00689 0.17 -1.4 711,260 - MPMX19_00689 0.17 -2.2 711,260 - MPMX19_00689 0.17 +0.1 711,260 - MPMX19_00689 0.17 -1.8 712,039 + -0.2 712,039 + -0.1 712,096 - +0.5 712,179 - -2.5 714,404 - +1.3 714,410 + -0.6 714,411 - -0.7 714,411 - +0.5 714,473 + +0.3 714,473 + +0.1 714,473 + -0.3 714,473 + +0.3 714,473 + +0.2 714,473 + -0.0 714,473 + -0.1 714,474 - -0.7 714,474 - -1.3 714,474 - -0.3 714,474 - +0.1 714,474 - -0.3 714,474 - -0.8 714,485 + -0.6 714,836 + MPMX19_00692 0.12 +0.5 714,836 + MPMX19_00692 0.12 -1.1 714,836 + MPMX19_00692 0.12 -0.3 714,836 + MPMX19_00692 0.12 -1.4 714,836 + MPMX19_00692 0.12 -0.3 714,836 + MPMX19_00692 0.12 +1.5 714,836 + MPMX19_00692 0.12 -1.3 714,836 + MPMX19_00692 0.12 -0.8 714,836 + MPMX19_00692 0.12 -0.3 714,837 - MPMX19_00692 0.12 +0.1 714,837 - MPMX19_00692 0.12 -0.3 714,837 - MPMX19_00692 0.12 -0.2 714,837 - MPMX19_00692 0.12 -1.5 714,837 - MPMX19_00692 0.12 -1.1 714,837 - MPMX19_00692 0.12 -2.1 714,890 + MPMX19_00692 0.29 +1.0 714,890 + MPMX19_00692 0.29 +0.2 714,890 + MPMX19_00692 0.29 -0.8 714,890 + MPMX19_00692 0.29 -2.2 714,890 + MPMX19_00692 0.29 -2.3 714,890 + MPMX19_00692 0.29 -0.7 714,890 + MPMX19_00692 0.29 -1.9 714,890 + MPMX19_00692 0.29 -1.1 714,890 + MPMX19_00692 0.29 +0.1 714,890 + MPMX19_00692 0.29 +0.3 714,890 + MPMX19_00692 0.29 -0.5 714,890 + MPMX19_00692 0.29 +0.3 714,890 + MPMX19_00692 0.29 -2.8 714,890 + MPMX19_00692 0.29 -0.3 714,890 + MPMX19_00692 0.29 -2.6 714,890 + MPMX19_00692 0.29 -1.1 714,890 + MPMX19_00692 0.29 +0.1 714,890 + MPMX19_00692 0.29 -1.1 714,891 - MPMX19_00692 0.29 -0.3 714,891 - MPMX19_00692 0.29 -1.0 714,891 - MPMX19_00692 0.29 +0.4 714,891 - MPMX19_00692 0.29 +0.6 714,891 - MPMX19_00692 0.29 +0.1 714,891 - MPMX19_00692 0.29 -0.4 714,891 - MPMX19_00692 0.29 -0.0 714,891 - MPMX19_00692 0.29 +0.9 714,891 - MPMX19_00692 0.29 -0.3 714,891 - MPMX19_00692 0.29 +0.2 714,891 - MPMX19_00692 0.29 -0.2 714,891 - MPMX19_00692 0.29 -0.7 714,891 - MPMX19_00692 0.29 +2.4 715,106 + -1.4 715,106 + -0.3 715,106 + -1.2 715,106 + +0.5 715,106 + +0.4 715,106 + +0.0 715,107 - +0.5 715,107 - -0.6 715,107 - -0.3 715,107 - +2.3 715,107 - +1.5 715,107 - -0.1 715,107 - +0.9 715,107 - -1.9 715,107 - -1.5 715,114 + +0.1 715,114 + -0.5 715,114 + -0.0 715,114 + +0.9 715,114 + -2.4 715,114 + +0.5 715,114 + -0.5 715,115 - +0.5 715,115 - +0.5 715,115 - -0.9 715,152 + -1.2 715,152 + -1.5 715,152 + +0.9 715,153 - +0.1 715,153 - -1.8 715,153 - +0.1 715,153 - +0.5 715,153 - +0.0 715,153 - -0.6 715,153 - -0.5 715,153 - -0.1 715,153 - -1.9 715,153 - -0.8 715,153 - -0.1 715,153 - +0.5
Or see this region's nucleotide sequence