Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_06219

Experiment: MGL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_06218 and MPMX19_06219 are separated by 457 nucleotidesMPMX19_06219 and MPMX19_06220 are separated by 196 nucleotides MPMX19_06218: MPMX19_06218 - ABC transporter periplasmic-binding protein YtfQ, at 401,475 to 402,443 _06218 MPMX19_06219: MPMX19_06219 - hypothetical protein, at 402,901 to 404,058 _06219 MPMX19_06220: MPMX19_06220 - Alpha-ketoglutaric semialdehyde dehydrogenase 2, at 404,255 to 405,835 _06220 Position (kb) 402 403 404 405Strain fitness (log2 ratio) -3 -2 -1 0 1at 402.061 kb on + strand, within MPMX19_06218at 402.061 kb on + strand, within MPMX19_06218at 402.061 kb on + strand, within MPMX19_06218at 402.061 kb on + strand, within MPMX19_06218at 402.061 kb on + strand, within MPMX19_06218at 402.061 kb on + strand, within MPMX19_06218at 402.061 kb on + strand, within MPMX19_06218at 402.061 kb on + strand, within MPMX19_06218at 402.061 kb on + strand, within MPMX19_06218at 402.061 kb on + strand, within MPMX19_06218at 402.061 kb on + strand, within MPMX19_06218at 402.061 kb on + strand, within MPMX19_06218at 402.061 kb on + strand, within MPMX19_06218at 402.061 kb on + strand, within MPMX19_06218at 402.061 kb on + strand, within MPMX19_06218at 402.061 kb on + strand, within MPMX19_06218at 402.061 kb on + strand, within MPMX19_06218at 402.061 kb on + strand, within MPMX19_06218at 402.062 kb on - strand, within MPMX19_06218at 402.062 kb on - strand, within MPMX19_06218at 402.062 kb on - strand, within MPMX19_06218at 402.062 kb on - strand, within MPMX19_06218at 402.062 kb on - strand, within MPMX19_06218at 402.062 kb on - strand, within MPMX19_06218at 402.062 kb on - strand, within MPMX19_06218at 402.062 kb on - strand, within MPMX19_06218at 402.062 kb on - strand, within MPMX19_06218at 402.062 kb on - strand, within MPMX19_06218at 402.062 kb on - strand, within MPMX19_06218at 402.062 kb on - strand, within MPMX19_06218at 402.062 kb on - strand, within MPMX19_06218at 402.404 kb on + strandat 402.464 kb on + strandat 402.464 kb on + strandat 402.464 kb on + strandat 402.476 kb on + strandat 402.476 kb on + strandat 402.476 kb on + strandat 402.476 kb on + strandat 402.476 kb on + strandat 402.476 kb on + strandat 402.476 kb on + strandat 402.477 kb on - strandat 402.477 kb on - strandat 402.477 kb on - strandat 402.477 kb on - strandat 402.496 kb on - strandat 402.509 kb on + strandat 402.510 kb on - strandat 402.523 kb on + strandat 402.523 kb on + strandat 402.523 kb on + strandat 402.608 kb on - strandat 402.667 kb on + strandat 402.668 kb on - strandat 402.669 kb on + strandat 402.669 kb on + strandat 402.669 kb on + strandat 402.669 kb on + strandat 402.669 kb on + strandat 402.669 kb on + strandat 402.670 kb on - strandat 402.670 kb on - strandat 402.670 kb on - strandat 402.670 kb on - strandat 402.670 kb on - strandat 402.670 kb on - strandat 402.670 kb on - strandat 402.902 kb on + strandat 402.902 kb on + strandat 402.902 kb on + strandat 402.902 kb on + strandat 402.902 kb on + strandat 402.902 kb on + strandat 402.903 kb on - strandat 402.903 kb on - strandat 402.903 kb on - strandat 402.903 kb on - strandat 402.903 kb on - strandat 402.903 kb on - strandat 402.903 kb on - strandat 402.903 kb on - strandat 402.903 kb on - strandat 402.903 kb on - strandat 402.903 kb on - strandat 402.903 kb on - strandat 402.903 kb on - strandat 402.903 kb on - strandat 402.903 kb on - strandat 402.903 kb on - strandat 402.903 kb on - strandat 402.903 kb on - strandat 402.986 kb on + strandat 402.986 kb on + strandat 402.986 kb on + strandat 402.986 kb on + strandat 402.987 kb on - strandat 402.987 kb on - strandat 403.022 kb on + strand, within MPMX19_06219at 403.022 kb on + strand, within MPMX19_06219at 403.022 kb on + strand, within MPMX19_06219at 403.022 kb on + strand, within MPMX19_06219at 403.022 kb on + strand, within MPMX19_06219at 403.022 kb on + strand, within MPMX19_06219at 403.022 kb on + strand, within MPMX19_06219at 403.022 kb on + strand, within MPMX19_06219at 403.022 kb on + strand, within MPMX19_06219at 403.022 kb on + strand, within MPMX19_06219at 403.022 kb on + strand, within MPMX19_06219at 403.023 kb on - strand, within MPMX19_06219at 403.023 kb on - strand, within MPMX19_06219at 403.023 kb on - strand, within MPMX19_06219at 403.023 kb on - strand, within MPMX19_06219at 403.023 kb on - strand, within MPMX19_06219at 403.023 kb on - strand, within MPMX19_06219at 403.023 kb on - strand, within MPMX19_06219at 403.023 kb on - strand, within MPMX19_06219at 403.023 kb on - strand, within MPMX19_06219at 403.133 kb on + strand, within MPMX19_06219at 403.133 kb on + strand, within MPMX19_06219at 403.133 kb on + strand, within MPMX19_06219at 403.133 kb on + strand, within MPMX19_06219at 403.133 kb on + strand, within MPMX19_06219at 403.134 kb on - strand, within MPMX19_06219at 403.134 kb on - strand, within MPMX19_06219at 403.134 kb on - strand, within MPMX19_06219at 403.134 kb on - strand, within MPMX19_06219at 403.134 kb on - strand, within MPMX19_06219at 403.134 kb on - strand, within MPMX19_06219at 403.134 kb on - strand, within MPMX19_06219at 403.134 kb on - strand, within MPMX19_06219at 403.202 kb on + strand, within MPMX19_06219at 403.226 kb on + strand, within MPMX19_06219at 403.226 kb on + strand, within MPMX19_06219at 403.226 kb on + strand, within MPMX19_06219at 403.226 kb on + strand, within MPMX19_06219at 403.226 kb on + strand, within MPMX19_06219at 403.226 kb on + strand, within MPMX19_06219at 403.226 kb on + strand, within MPMX19_06219at 403.226 kb on + strand, within MPMX19_06219at 403.226 kb on + strand, within MPMX19_06219at 403.226 kb on + strand, within MPMX19_06219at 403.226 kb on + strand, within MPMX19_06219at 403.226 kb on + strand, within MPMX19_06219at 403.226 kb on + strand, within MPMX19_06219at 403.226 kb on + strand, within MPMX19_06219at 403.226 kb on + strand, within MPMX19_06219at 403.226 kb on + strand, within MPMX19_06219at 403.226 kb on + strand, within MPMX19_06219at 403.227 kb on - strand, within MPMX19_06219at 403.227 kb on - strand, within MPMX19_06219at 403.227 kb on - strand, within MPMX19_06219at 403.227 kb on - strand, within MPMX19_06219at 403.227 kb on - strand, within MPMX19_06219at 403.227 kb on - strand, within MPMX19_06219at 403.227 kb on - strand, within MPMX19_06219at 403.227 kb on - strand, within MPMX19_06219at 403.227 kb on - strand, within MPMX19_06219at 403.227 kb on - strand, within MPMX19_06219at 403.227 kb on - strand, within MPMX19_06219at 403.227 kb on - strand, within MPMX19_06219at 403.227 kb on - strand, within MPMX19_06219at 403.227 kb on - strand, within MPMX19_06219at 403.227 kb on - strand, within MPMX19_06219at 403.227 kb on - strand, within MPMX19_06219at 403.253 kb on + strand, within MPMX19_06219at 403.253 kb on + strand, within MPMX19_06219at 403.254 kb on - strand, within MPMX19_06219at 403.254 kb on - strand, within MPMX19_06219at 403.343 kb on + strand, within MPMX19_06219at 403.343 kb on + strand, within MPMX19_06219at 403.343 kb on + strand, within MPMX19_06219at 403.343 kb on + strand, within MPMX19_06219at 403.343 kb on + strand, within MPMX19_06219at 403.343 kb on + strand, within MPMX19_06219at 403.344 kb on - strand, within MPMX19_06219at 403.344 kb on - strand, within MPMX19_06219at 403.388 kb on + strand, within MPMX19_06219at 403.388 kb on + strand, within MPMX19_06219at 403.388 kb on + strand, within MPMX19_06219at 403.388 kb on + strand, within MPMX19_06219at 403.388 kb on + strand, within MPMX19_06219at 403.389 kb on - strand, within MPMX19_06219at 403.389 kb on - strand, within MPMX19_06219at 403.389 kb on - strand, within MPMX19_06219at 403.389 kb on - strand, within MPMX19_06219at 403.389 kb on - strand, within MPMX19_06219at 403.389 kb on - strand, within MPMX19_06219at 403.389 kb on - strand, within MPMX19_06219at 403.389 kb on - strand, within MPMX19_06219at 403.406 kb on + strand, within MPMX19_06219at 403.406 kb on + strand, within MPMX19_06219at 403.406 kb on + strand, within MPMX19_06219at 403.406 kb on + strand, within MPMX19_06219at 403.406 kb on + strand, within MPMX19_06219at 403.406 kb on + strand, within MPMX19_06219at 403.406 kb on + strand, within MPMX19_06219at 403.406 kb on + strand, within MPMX19_06219at 403.406 kb on + strand, within MPMX19_06219at 403.406 kb on + strand, within MPMX19_06219at 403.406 kb on + strand, within MPMX19_06219at 403.407 kb on - strand, within MPMX19_06219at 403.407 kb on - strand, within MPMX19_06219at 403.407 kb on - strand, within MPMX19_06219at 403.407 kb on - strand, within MPMX19_06219at 403.407 kb on - strand, within MPMX19_06219at 403.407 kb on - strand, within MPMX19_06219at 403.407 kb on - strand, within MPMX19_06219at 403.419 kb on - strand, within MPMX19_06219at 403.473 kb on + strand, within MPMX19_06219at 403.473 kb on + strand, within MPMX19_06219at 403.474 kb on - strand, within MPMX19_06219at 403.474 kb on - strand, within MPMX19_06219at 403.499 kb on + strand, within MPMX19_06219at 403.500 kb on - strand, within MPMX19_06219at 403.500 kb on - strand, within MPMX19_06219at 403.500 kb on - strand, within MPMX19_06219at 403.541 kb on + strand, within MPMX19_06219at 403.541 kb on + strand, within MPMX19_06219at 403.541 kb on + strand, within MPMX19_06219at 403.541 kb on + strand, within MPMX19_06219at 403.542 kb on - strand, within MPMX19_06219at 403.542 kb on - strand, within MPMX19_06219at 403.542 kb on - strand, within MPMX19_06219at 403.542 kb on - strand, within MPMX19_06219at 403.542 kb on - strand, within MPMX19_06219at 403.542 kb on - strand, within MPMX19_06219at 403.542 kb on - strand, within MPMX19_06219at 403.542 kb on - strand, within MPMX19_06219at 403.542 kb on - strand, within MPMX19_06219at 403.542 kb on - strand, within MPMX19_06219at 403.542 kb on - strand, within MPMX19_06219at 403.827 kb on - strand, within MPMX19_06219at 403.928 kb on + strand, within MPMX19_06219at 403.928 kb on + strand, within MPMX19_06219at 403.928 kb on + strand, within MPMX19_06219at 403.928 kb on + strand, within MPMX19_06219at 403.929 kb on - strand, within MPMX19_06219at 403.929 kb on - strand, within MPMX19_06219at 403.929 kb on - strand, within MPMX19_06219at 403.943 kb on + strandat 404.072 kb on - strandat 404.256 kb on + strandat 404.256 kb on + strandat 404.256 kb on + strandat 404.257 kb on - strandat 404.257 kb on - strandat 405.048 kb on + strand, within MPMX19_06220at 405.048 kb on + strand, within MPMX19_06220at 405.048 kb on + strand, within MPMX19_06220at 405.048 kb on + strand, within MPMX19_06220

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Per-strain Table

Position Strand Gene LocusTag Fraction MGL
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402,061 + MPMX19_06218 0.60 -0.0
402,061 + MPMX19_06218 0.60 +0.2
402,061 + MPMX19_06218 0.60 +0.3
402,061 + MPMX19_06218 0.60 +1.7
402,061 + MPMX19_06218 0.60 -0.4
402,061 + MPMX19_06218 0.60 -0.6
402,061 + MPMX19_06218 0.60 +0.7
402,061 + MPMX19_06218 0.60 +0.2
402,061 + MPMX19_06218 0.60 +0.7
402,061 + MPMX19_06218 0.60 -0.7
402,061 + MPMX19_06218 0.60 -0.8
402,061 + MPMX19_06218 0.60 -0.8
402,061 + MPMX19_06218 0.60 -1.5
402,061 + MPMX19_06218 0.60 +0.4
402,061 + MPMX19_06218 0.60 -0.3
402,061 + MPMX19_06218 0.60 +0.2
402,061 + MPMX19_06218 0.60 -1.0
402,061 + MPMX19_06218 0.60 -0.6
402,062 - MPMX19_06218 0.61 -1.8
402,062 - MPMX19_06218 0.61 -0.9
402,062 - MPMX19_06218 0.61 -1.6
402,062 - MPMX19_06218 0.61 -0.3
402,062 - MPMX19_06218 0.61 -1.0
402,062 - MPMX19_06218 0.61 -1.3
402,062 - MPMX19_06218 0.61 +0.5
402,062 - MPMX19_06218 0.61 -0.3
402,062 - MPMX19_06218 0.61 +0.3
402,062 - MPMX19_06218 0.61 -0.5
402,062 - MPMX19_06218 0.61 -0.4
402,062 - MPMX19_06218 0.61 -0.7
402,062 - MPMX19_06218 0.61 -1.2
402,404 + +0.3
402,464 + +0.8
402,464 + -1.0
402,464 + -0.3
402,476 + -1.0
402,476 + -1.1
402,476 + -1.3
402,476 + -0.1
402,476 + -0.8
402,476 + -1.0
402,476 + -0.4
402,477 - +0.4
402,477 - -2.5
402,477 - -1.6
402,477 - +1.6
402,496 - -1.3
402,509 + -0.1
402,510 - -0.0
402,523 + -0.0
402,523 + +0.6
402,523 + -0.1
402,608 - -1.4
402,667 + -1.0
402,668 - -1.0
402,669 + -0.1
402,669 + -0.3
402,669 + -2.1
402,669 + -1.7
402,669 + -1.4
402,669 + -0.8
402,670 - -1.3
402,670 - -0.0
402,670 - -1.6
402,670 - -0.4
402,670 - +1.0
402,670 - -0.8
402,670 - -0.4
402,902 + -1.3
402,902 + -0.9
402,902 + -0.3
402,902 + -0.8
402,902 + -1.4
402,902 + +0.7
402,903 - -1.1
402,903 - -1.4
402,903 - -3.1
402,903 - -1.4
402,903 - +0.3
402,903 - -0.1
402,903 - -2.5
402,903 - -1.0
402,903 - -1.2
402,903 - -1.8
402,903 - -1.3
402,903 - -2.4
402,903 - +1.0
402,903 - -2.1
402,903 - -0.3
402,903 - -0.0
402,903 - -1.0
402,903 - +0.1
402,986 + -0.3
402,986 + +1.0
402,986 + -1.0
402,986 + +0.3
402,987 - -1.0
402,987 - -1.4
403,022 + MPMX19_06219 0.10 +0.4
403,022 + MPMX19_06219 0.10 +1.3
403,022 + MPMX19_06219 0.10 -1.5
403,022 + MPMX19_06219 0.10 +0.3
403,022 + MPMX19_06219 0.10 -1.0
403,022 + MPMX19_06219 0.10 -1.0
403,022 + MPMX19_06219 0.10 -1.0
403,022 + MPMX19_06219 0.10 +0.3
403,022 + MPMX19_06219 0.10 -0.3
403,022 + MPMX19_06219 0.10 -1.2
403,022 + MPMX19_06219 0.10 -0.0
403,023 - MPMX19_06219 0.11 -0.5
403,023 - MPMX19_06219 0.11 -1.1
403,023 - MPMX19_06219 0.11 -0.8
403,023 - MPMX19_06219 0.11 -1.8
403,023 - MPMX19_06219 0.11 -0.4
403,023 - MPMX19_06219 0.11 +0.2
403,023 - MPMX19_06219 0.11 -0.7
403,023 - MPMX19_06219 0.11 -1.2
403,023 - MPMX19_06219 0.11 -0.8
403,133 + MPMX19_06219 0.20 -0.8
403,133 + MPMX19_06219 0.20 -0.4
403,133 + MPMX19_06219 0.20 -0.0
403,133 + MPMX19_06219 0.20 -0.0
403,133 + MPMX19_06219 0.20 -1.0
403,134 - MPMX19_06219 0.20 -1.3
403,134 - MPMX19_06219 0.20 -1.1
403,134 - MPMX19_06219 0.20 -0.9
403,134 - MPMX19_06219 0.20 -0.8
403,134 - MPMX19_06219 0.20 -0.1
403,134 - MPMX19_06219 0.20 +0.7
403,134 - MPMX19_06219 0.20 -0.0
403,134 - MPMX19_06219 0.20 -1.6
403,202 + MPMX19_06219 0.26 -1.5
403,226 + MPMX19_06219 0.28 -0.3
403,226 + MPMX19_06219 0.28 -0.8
403,226 + MPMX19_06219 0.28 -1.5
403,226 + MPMX19_06219 0.28 -2.1
403,226 + MPMX19_06219 0.28 +0.4
403,226 + MPMX19_06219 0.28 +0.7
403,226 + MPMX19_06219 0.28 -2.1
403,226 + MPMX19_06219 0.28 +0.4
403,226 + MPMX19_06219 0.28 -0.6
403,226 + MPMX19_06219 0.28 -0.5
403,226 + MPMX19_06219 0.28 -1.1
403,226 + MPMX19_06219 0.28 -1.7
403,226 + MPMX19_06219 0.28 +0.3
403,226 + MPMX19_06219 0.28 -0.7
403,226 + MPMX19_06219 0.28 -1.1
403,226 + MPMX19_06219 0.28 -0.0
403,226 + MPMX19_06219 0.28 -0.9
403,227 - MPMX19_06219 0.28 -0.6
403,227 - MPMX19_06219 0.28 -0.8
403,227 - MPMX19_06219 0.28 -1.3
403,227 - MPMX19_06219 0.28 -0.1
403,227 - MPMX19_06219 0.28 +0.3
403,227 - MPMX19_06219 0.28 -0.2
403,227 - MPMX19_06219 0.28 -0.8
403,227 - MPMX19_06219 0.28 +0.1
403,227 - MPMX19_06219 0.28 -0.6
403,227 - MPMX19_06219 0.28 +0.3
403,227 - MPMX19_06219 0.28 +1.3
403,227 - MPMX19_06219 0.28 -0.7
403,227 - MPMX19_06219 0.28 +0.4
403,227 - MPMX19_06219 0.28 -2.0
403,227 - MPMX19_06219 0.28 -0.1
403,227 - MPMX19_06219 0.28 -0.4
403,253 + MPMX19_06219 0.30 -0.6
403,253 + MPMX19_06219 0.30 +0.1
403,254 - MPMX19_06219 0.30 +0.3
403,254 - MPMX19_06219 0.30 -1.0
403,343 + MPMX19_06219 0.38 -1.8
403,343 + MPMX19_06219 0.38 -0.8
403,343 + MPMX19_06219 0.38 +0.7
403,343 + MPMX19_06219 0.38 -1.1
403,343 + MPMX19_06219 0.38 -0.2
403,343 + MPMX19_06219 0.38 -0.1
403,344 - MPMX19_06219 0.38 -0.7
403,344 - MPMX19_06219 0.38 -0.8
403,388 + MPMX19_06219 0.42 -0.7
403,388 + MPMX19_06219 0.42 -1.0
403,388 + MPMX19_06219 0.42 -1.9
403,388 + MPMX19_06219 0.42 -1.4
403,388 + MPMX19_06219 0.42 -1.8
403,389 - MPMX19_06219 0.42 -0.5
403,389 - MPMX19_06219 0.42 -1.8
403,389 - MPMX19_06219 0.42 -1.4
403,389 - MPMX19_06219 0.42 -0.3
403,389 - MPMX19_06219 0.42 -1.2
403,389 - MPMX19_06219 0.42 -3.0
403,389 - MPMX19_06219 0.42 +0.3
403,389 - MPMX19_06219 0.42 -1.2
403,406 + MPMX19_06219 0.44 -0.8
403,406 + MPMX19_06219 0.44 -2.2
403,406 + MPMX19_06219 0.44 -0.2
403,406 + MPMX19_06219 0.44 +1.0
403,406 + MPMX19_06219 0.44 -2.3
403,406 + MPMX19_06219 0.44 -0.2
403,406 + MPMX19_06219 0.44 -1.1
403,406 + MPMX19_06219 0.44 +0.3
403,406 + MPMX19_06219 0.44 -0.8
403,406 + MPMX19_06219 0.44 +0.2
403,406 + MPMX19_06219 0.44 -2.3
403,407 - MPMX19_06219 0.44 -1.1
403,407 - MPMX19_06219 0.44 +1.0
403,407 - MPMX19_06219 0.44 -0.3
403,407 - MPMX19_06219 0.44 -1.5
403,407 - MPMX19_06219 0.44 -0.3
403,407 - MPMX19_06219 0.44 -2.3
403,407 - MPMX19_06219 0.44 -0.5
403,419 - MPMX19_06219 0.45 -1.3
403,473 + MPMX19_06219 0.49 -1.1
403,473 + MPMX19_06219 0.49 -0.4
403,474 - MPMX19_06219 0.49 -0.0
403,474 - MPMX19_06219 0.49 +1.0
403,499 + MPMX19_06219 0.52 -0.3
403,500 - MPMX19_06219 0.52 -0.5
403,500 - MPMX19_06219 0.52 -1.4
403,500 - MPMX19_06219 0.52 -1.3
403,541 + MPMX19_06219 0.55 -0.3
403,541 + MPMX19_06219 0.55 -0.8
403,541 + MPMX19_06219 0.55 +0.2
403,541 + MPMX19_06219 0.55 -0.3
403,542 - MPMX19_06219 0.55 -2.1
403,542 - MPMX19_06219 0.55 -1.1
403,542 - MPMX19_06219 0.55 -0.1
403,542 - MPMX19_06219 0.55 +0.3
403,542 - MPMX19_06219 0.55 -1.4
403,542 - MPMX19_06219 0.55 -1.3
403,542 - MPMX19_06219 0.55 +0.2
403,542 - MPMX19_06219 0.55 +0.1
403,542 - MPMX19_06219 0.55 -0.5
403,542 - MPMX19_06219 0.55 -0.7
403,542 - MPMX19_06219 0.55 +1.7
403,827 - MPMX19_06219 0.80 -1.0
403,928 + MPMX19_06219 0.89 -1.4
403,928 + MPMX19_06219 0.89 -0.1
403,928 + MPMX19_06219 0.89 -1.9
403,928 + MPMX19_06219 0.89 -1.4
403,929 - MPMX19_06219 0.89 +0.1
403,929 - MPMX19_06219 0.89 -1.3
403,929 - MPMX19_06219 0.89 -2.7
403,943 + -1.5
404,072 - -0.4
404,256 + -0.1
404,256 + -0.5
404,256 + -0.8
404,257 - -2.6
404,257 - -1.9
405,048 + MPMX19_06220 0.50 -0.3
405,048 + MPMX19_06220 0.50 -0.9
405,048 + MPMX19_06220 0.50 -0.0
405,048 + MPMX19_06220 0.50 -0.7

Or see this region's nucleotide sequence