Strain Fitness in Azospirillum sp. SherDot2

Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_05956

Experiment: MGL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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Per-strain Table

Position	Strand	LocusTag	Fraction	MGL
				remove
103,652	+			-0.8
103,652	+			-0.8
103,652	+			-0.6
103,652	+			-0.3
103,652	+			-0.9
103,652	+			+0.0
103,652	+			+1.6
103,652	+			-0.7
103,652	+			-2.1
103,652	+			+0.1
103,652	+			-0.3
103,652	+			-0.8
103,652	+			-1.2
103,653	-			+0.3
103,653	-			-0.3
103,653	-			+0.2
103,653	-			+0.3
103,653	-			-2.4
103,653	-			+0.1
103,653	-			-1.4
103,653	-			-0.2
103,653	-			+0.5
103,653	-			-1.7
103,653	-			-1.5
103,653	-			+0.2
103,653	-			-1.1
103,757	+	MPMX19_05955	0.19	+0.3
103,757	+	MPMX19_05955	0.19	-1.8
103,757	+	MPMX19_05955	0.19	-0.3
103,757	+	MPMX19_05955	0.19	+0.1
103,757	+	MPMX19_05955	0.19	-1.2
103,758	-	MPMX19_05955	0.19	-0.7
103,758	-	MPMX19_05955	0.19	-2.4
103,758	-	MPMX19_05955	0.19	-1.1
103,758	-	MPMX19_05955	0.19	+0.7
103,796	+	MPMX19_05955	0.23	-0.9
103,797	-	MPMX19_05955	0.23	-1.5
103,797	-	MPMX19_05955	0.23	-0.8
103,934	+	MPMX19_05955	0.37	+0.8
103,934	+	MPMX19_05955	0.37	-0.7
103,934	+	MPMX19_05955	0.37	-2.3
103,934	+	MPMX19_05955	0.37	-1.5
103,934	+	MPMX19_05955	0.37	+0.0
103,934	+	MPMX19_05955	0.37	+0.2
103,934	+	MPMX19_05955	0.37	-0.6
103,934	+	MPMX19_05955	0.37	+0.7
103,934	+	MPMX19_05955	0.37	-0.6
103,934	+	MPMX19_05955	0.37	+0.7
103,935	-	MPMX19_05955	0.38	-0.3
103,935	-	MPMX19_05955	0.38	-0.1
103,935	-	MPMX19_05955	0.38	+1.2
103,935	-	MPMX19_05955	0.38	+0.0
103,935	-	MPMX19_05955	0.38	-1.0
103,935	-	MPMX19_05955	0.38	-1.6
103,935	-	MPMX19_05955	0.38	+0.7
104,265	+	MPMX19_05955	0.73	+1.7
104,266	-	MPMX19_05955	0.73	-1.6
104,266	-	MPMX19_05955	0.73	+0.7
104,280	-	MPMX19_05955	0.74	-0.5
104,280	-	MPMX19_05955	0.74	+0.0
104,534	+			-0.7
104,534	+			-0.7
104,535	-			+0.2
104,535	-			-0.3
104,535	-			-0.9
104,535	-			+0.1
104,535	-			-0.5
104,607	+			+0.5
104,607	+			+0.3
104,607	+			-0.8
104,608	-			+0.2
104,728	+	MPMX19_05956	0.18	+0.7
104,866	+	MPMX19_05956	0.43	-1.2
104,866	+	MPMX19_05956	0.43	-1.1
104,866	+	MPMX19_05956	0.43	-1.3
104,866	+	MPMX19_05956	0.43	-1.1
104,866	+	MPMX19_05956	0.43	+0.6
104,866	+	MPMX19_05956	0.43	-1.0
104,866	+	MPMX19_05956	0.43	+0.3
104,866	+	MPMX19_05956	0.43	+0.0
104,866	+	MPMX19_05956	0.43	-0.3
104,866	+	MPMX19_05956	0.43	+1.3
104,866	+	MPMX19_05956	0.43	-0.3
104,866	+	MPMX19_05956	0.43	-0.7
104,866	+	MPMX19_05956	0.43	-1.4
104,866	+	MPMX19_05956	0.43	+1.8
104,867	-	MPMX19_05956	0.43	-1.8
104,867	-	MPMX19_05956	0.43	-0.5
104,867	-	MPMX19_05956	0.43	-2.4
104,867	-	MPMX19_05956	0.43	-0.3
104,867	-	MPMX19_05956	0.43	-0.6
104,867	-	MPMX19_05956	0.43	-0.6
104,867	-	MPMX19_05956	0.43	+0.5
104,867	-	MPMX19_05956	0.43	-0.3
104,867	-	MPMX19_05956	0.43	-2.0
104,867	-	MPMX19_05956	0.43	+0.3
104,867	-	MPMX19_05956	0.43	+0.0
104,867	-	MPMX19_05956	0.43	+0.7
104,867	-	MPMX19_05956	0.43	+1.7
104,867	-	MPMX19_05956	0.43	-1.5
104,868	-	MPMX19_05956	0.43	+0.0
105,232	+			+0.2
105,232	+			+0.2
105,233	-			-1.0
105,233	-			-0.7
105,244	-			-0.7
105,352	+			-1.2
105,353	-			+1.0
105,355	+			-0.9
105,355	+			-1.6
105,355	+			-0.5
105,355	+			-0.6
105,355	+			-0.3
105,355	+			-0.7
105,355	+			+0.0
105,356	-			-1.4
105,356	-			-0.3
105,356	-			-0.6
105,356	-			-2.2
105,356	-			-0.8
105,356	-			+0.2
105,356	-			-1.0
105,424	+	MPMX19_05957	0.16	+0.2
105,424	+	MPMX19_05957	0.16	-0.8
105,424	+	MPMX19_05957	0.16	+0.5
105,424	+	MPMX19_05957	0.16	+0.5
105,425	-	MPMX19_05957	0.16	-0.2
105,425	-	MPMX19_05957	0.16	+0.2
105,425	-	MPMX19_05957	0.16	+0.0
105,425	-	MPMX19_05957	0.16	-0.9
105,425	-	MPMX19_05957	0.16	-1.4
105,425	-	MPMX19_05957	0.16	-0.5
105,425	-	MPMX19_05957	0.16	-0.3
105,460	+	MPMX19_05957	0.22	-1.3
105,460	+	MPMX19_05957	0.22	+0.1
105,461	-	MPMX19_05957	0.22	-1.0
105,461	-	MPMX19_05957	0.22	-1.0
105,461	-	MPMX19_05957	0.22	-1.9
105,691	+	MPMX19_05957	0.59	-1.0
105,691	+	MPMX19_05957	0.59	-2.1
105,691	+	MPMX19_05957	0.59	-1.9
105,691	+	MPMX19_05957	0.59	-2.1
105,691	+	MPMX19_05957	0.59	-0.8
105,691	+	MPMX19_05957	0.59	-1.4
105,691	+	MPMX19_05957	0.59	-0.4
105,691	+	MPMX19_05957	0.59	-0.8
105,691	+	MPMX19_05957	0.59	+1.6
105,691	+	MPMX19_05957	0.59	+0.5
105,691	+	MPMX19_05957	0.59	-1.0
105,691	+	MPMX19_05957	0.59	+0.2
105,691	+	MPMX19_05957	0.59	-0.3
105,691	+	MPMX19_05957	0.59	-1.2
105,691	+	MPMX19_05957	0.59	-0.2
105,691	+	MPMX19_05957	0.59	-2.4
105,691	+	MPMX19_05957	0.59	-1.4
105,691	+	MPMX19_05957	0.59	+0.3
105,692	-	MPMX19_05957	0.60	-0.3
105,692	-	MPMX19_05957	0.60	+0.5
105,692	-	MPMX19_05957	0.60	-2.7
105,692	-	MPMX19_05957	0.60	+0.3
105,692	-	MPMX19_05957	0.60	+0.3
105,692	-	MPMX19_05957	0.60	+0.3
105,692	-	MPMX19_05957	0.60	-0.9
105,692	-	MPMX19_05957	0.60	-0.7
105,692	-	MPMX19_05957	0.60	+0.5
105,692	-	MPMX19_05957	0.60	-0.8
105,692	-	MPMX19_05957	0.60	-0.5
105,692	-	MPMX19_05957	0.60	-1.4
105,692	-	MPMX19_05957	0.60	-0.8
105,692	-	MPMX19_05957	0.60	-1.0
105,692	-	MPMX19_05957	0.60	-1.0
105,692	-	MPMX19_05957	0.60	+1.3
105,693	-	MPMX19_05957	0.60	-0.4
105,781	+	MPMX19_05957	0.74	-0.5
105,781	+	MPMX19_05957	0.74	+0.0
105,781	+	MPMX19_05957	0.74	-0.4
105,781	+	MPMX19_05957	0.74	-0.3
105,782	-	MPMX19_05957	0.74	-1.0
105,782	-	MPMX19_05957	0.74	+1.3
105,782	-	MPMX19_05957	0.74	-1.6
105,782	-	MPMX19_05957	0.74	-1.5
105,782	-	MPMX19_05957	0.74	+0.5
105,782	-	MPMX19_05957	0.74	+0.3
105,782	-	MPMX19_05957	0.74	-1.3
105,961	+			+0.3
105,962	-			-2.0
105,962	-			+0.2
105,962	-			+0.1
105,962	-			-0.7
105,962	-			-1.0
106,001	+			+0.0
106,001	+			-0.7
106,001	+			-1.7
106,001	+			-0.8
106,002	-			-0.8
106,002	-			+0.5
106,002	-			-1.0
106,002	-			+0.1
106,002	-			-1.4
106,002	-			-1.1
106,002	-			+0.2
106,002	-			-1.0
106,002	-			-1.3
106,003	+			+0.9
106,003	+			-0.7
106,003	+			-0.8
106,003	+			-1.3
106,003	+			-1.1
106,003	+			-0.7
106,003	+			+0.2
106,003	+			-1.0
106,003	+			-0.8
106,003	+			-1.0
106,003	+			+0.2
106,003	+			-0.7
106,004	-			-0.7
106,004	-			-0.9
106,004	-			+1.0
106,004	-			-0.3
106,004	-			-0.5
106,004	-			-0.1
106,004	-			-0.9
106,004	-			+0.5
106,035	+			+0.0
106,035	+			-1.1
106,035	+			-0.6
106,035	+			+0.0
106,035	+			-1.3
106,036	-			-0.2
106,036	-			-1.0
106,044	+			-1.1
106,044	+			-0.3
106,045	-			-0.6
106,045	-			-0.3
106,050	+			-2.4
106,050	+			+1.1
106,050	+			-1.2
106,051	-			-0.3
106,051	-			-0.8
106,051	-			-0.2
106,117	+			-0.9
106,117	+			+0.3
106,117	+			-1.2
106,117	+			-1.8
106,117	+			-1.8
106,117	+			+1.2
106,117	+			-0.5
106,117	+			+0.5
106,117	+			+1.2
106,117	+			-0.5
106,117	+			-2.0
106,118	-			-0.5
106,118	-			+0.0
106,118	-			-0.8
106,118	-			-1.0
106,118	-			-1.6
106,118	-			-0.3
106,118	-			-1.3
106,118	-			-1.0
106,118	-			-1.3
106,122	+			-0.3
106,122	+			-0.2
106,122	+			+0.7
106,122	+			+0.3
106,122	+			+0.3
106,122	+			-0.8
106,122	+			-2.4
106,122	+			+0.2
106,122	+			-0.3
106,122	+			+1.1
106,122	+			-1.5
106,122	+			-0.3
106,122	+			+0.0
106,122	+			-0.3
106,122	+			-0.1
106,123	-			-0.1
106,123	-			-1.6
106,123	-			+0.1
106,123	-			-1.1
106,123	-			-0.9
106,123	-			+0.9
106,123	-			-1.4
106,123	-			-1.9
106,123	-			-0.1
106,123	-			+0.3
106,123	-			-1.0
106,123	-			-1.1

Or see this region's nucleotide sequence