Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_05240 and MPMX19_05241 are separated by 230 nucleotides MPMX19_05241 and MPMX19_05242 are separated by 33 nucleotides MPMX19_05242 and MPMX19_05243 are separated by 79 nucleotides
MPMX19_05240: MPMX19_05240 - L-threonine dehydratase catabolic TdcB, at 769,843 to 770,817
_05240
MPMX19_05241: MPMX19_05241 - hypothetical protein, at 771,048 to 771,704
_05241
MPMX19_05242: MPMX19_05242 - hypothetical protein, at 771,738 to 772,460
_05242
MPMX19_05243: MPMX19_05243 - hypothetical protein, at 772,540 to 773,538
_05243
Position (kb) 771
772 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 770.190 kb on - strand, within MPMX19_05240 at 770.204 kb on + strand, within MPMX19_05240 at 770.204 kb on + strand, within MPMX19_05240 at 770.204 kb on + strand, within MPMX19_05240 at 770.204 kb on + strand, within MPMX19_05240 at 770.204 kb on + strand, within MPMX19_05240 at 770.204 kb on + strand, within MPMX19_05240 at 770.204 kb on + strand, within MPMX19_05240 at 770.204 kb on + strand, within MPMX19_05240 at 770.204 kb on + strand, within MPMX19_05240 at 770.204 kb on + strand, within MPMX19_05240 at 770.205 kb on - strand, within MPMX19_05240 at 770.205 kb on - strand, within MPMX19_05240 at 770.205 kb on - strand, within MPMX19_05240 at 770.205 kb on - strand, within MPMX19_05240 at 770.205 kb on - strand, within MPMX19_05240 at 770.205 kb on - strand, within MPMX19_05240 at 770.205 kb on - strand, within MPMX19_05240 at 770.205 kb on - strand, within MPMX19_05240 at 770.205 kb on - strand, within MPMX19_05240 at 770.205 kb on - strand, within MPMX19_05240 at 770.205 kb on - strand, within MPMX19_05240 at 770.205 kb on - strand, within MPMX19_05240 at 770.205 kb on - strand, within MPMX19_05240 at 770.205 kb on - strand, within MPMX19_05240 at 770.205 kb on - strand, within MPMX19_05240 at 770.229 kb on + strand, within MPMX19_05240 at 770.229 kb on + strand, within MPMX19_05240 at 770.229 kb on + strand, within MPMX19_05240 at 770.229 kb on + strand, within MPMX19_05240 at 770.230 kb on - strand, within MPMX19_05240 at 770.230 kb on - strand, within MPMX19_05240 at 770.230 kb on - strand, within MPMX19_05240 at 770.230 kb on - strand, within MPMX19_05240 at 770.230 kb on - strand, within MPMX19_05240 at 770.230 kb on - strand, within MPMX19_05240 at 770.230 kb on - strand, within MPMX19_05240 at 770.350 kb on + strand, within MPMX19_05240 at 770.350 kb on + strand, within MPMX19_05240 at 770.350 kb on + strand, within MPMX19_05240 at 770.350 kb on + strand, within MPMX19_05240 at 770.351 kb on - strand, within MPMX19_05240 at 770.351 kb on - strand, within MPMX19_05240 at 770.839 kb on + strand at 770.839 kb on + strand at 770.839 kb on + strand at 770.839 kb on + strand at 770.839 kb on + strand at 770.839 kb on + strand at 770.839 kb on + strand at 770.839 kb on + strand at 770.839 kb on + strand at 770.839 kb on + strand at 770.839 kb on + strand at 770.839 kb on + strand at 770.839 kb on + strand at 770.839 kb on + strand at 770.839 kb on + strand at 770.839 kb on + strand at 770.839 kb on + strand at 770.840 kb on - strand at 770.840 kb on - strand at 770.840 kb on - strand at 770.840 kb on - strand at 770.840 kb on - strand at 770.840 kb on - strand at 770.840 kb on - strand at 770.840 kb on - strand at 770.946 kb on + strand at 770.946 kb on + strand at 770.946 kb on + strand at 770.946 kb on + strand at 770.946 kb on + strand at 770.947 kb on - strand at 770.947 kb on - strand at 770.947 kb on - strand at 770.947 kb on - strand at 770.947 kb on - strand at 770.978 kb on + strand at 770.978 kb on + strand at 770.978 kb on + strand at 770.979 kb on - strand at 770.979 kb on - strand at 770.979 kb on - strand at 770.979 kb on - strand at 770.979 kb on - strand at 770.997 kb on + strand at 770.998 kb on - strand at 771.016 kb on - strand at 771.016 kb on - strand at 771.099 kb on + strand at 771.099 kb on + strand at 771.099 kb on + strand at 771.099 kb on + strand at 771.099 kb on + strand at 771.099 kb on + strand at 771.099 kb on + strand at 771.099 kb on + strand at 771.099 kb on + strand at 771.100 kb on - strand at 771.100 kb on - strand at 771.100 kb on - strand at 771.100 kb on - strand at 771.100 kb on - strand at 771.100 kb on - strand at 771.100 kb on - strand at 771.100 kb on - strand at 771.100 kb on - strand at 771.100 kb on - strand at 771.100 kb on - strand at 771.100 kb on - strand at 771.100 kb on - strand at 771.100 kb on - strand at 771.100 kb on - strand at 771.100 kb on - strand at 771.100 kb on - strand at 771.246 kb on + strand, within MPMX19_05241 at 771.246 kb on + strand, within MPMX19_05241 at 771.247 kb on - strand, within MPMX19_05241 at 771.423 kb on + strand, within MPMX19_05241 at 771.423 kb on + strand, within MPMX19_05241 at 771.423 kb on + strand, within MPMX19_05241 at 771.424 kb on - strand, within MPMX19_05241 at 771.424 kb on - strand, within MPMX19_05241 at 771.424 kb on - strand, within MPMX19_05241 at 771.522 kb on + strand, within MPMX19_05241 at 771.522 kb on + strand, within MPMX19_05241 at 771.523 kb on - strand, within MPMX19_05241 at 771.523 kb on - strand, within MPMX19_05241 at 771.523 kb on - strand, within MPMX19_05241 at 771.559 kb on + strand, within MPMX19_05241 at 771.584 kb on - strand, within MPMX19_05241 at 771.690 kb on + strand at 771.690 kb on + strand at 771.690 kb on + strand at 771.690 kb on + strand at 771.690 kb on + strand at 771.690 kb on + strand at 771.691 kb on - strand at 771.691 kb on - strand at 771.691 kb on - strand at 771.691 kb on - strand at 771.691 kb on - strand at 771.691 kb on - strand at 771.739 kb on + strand at 771.739 kb on + strand at 771.740 kb on - strand at 771.740 kb on - strand at 772.494 kb on + strand at 772.495 kb on - strand at 772.495 kb on - strand at 772.495 kb on - strand at 772.495 kb on - strand at 772.495 kb on - strand at 772.495 kb on - strand at 772.495 kb on - strand at 772.495 kb on - strand at 772.495 kb on - strand at 772.495 kb on - strand at 772.495 kb on - strand at 772.495 kb on - strand at 772.495 kb on - strand at 772.495 kb on - strand at 772.495 kb on - strand at 772.495 kb on - strand at 772.495 kb on - strand at 772.495 kb on - strand at 772.495 kb on - strand at 772.495 kb on - strand at 772.568 kb on + strand at 772.568 kb on + strand at 772.568 kb on + strand at 772.568 kb on + strand at 772.568 kb on + strand at 772.568 kb on + strand at 772.568 kb on + strand at 772.568 kb on + strand at 772.568 kb on + strand at 772.568 kb on + strand at 772.568 kb on + strand at 772.568 kb on + strand at 772.568 kb on + strand at 772.568 kb on + strand at 772.568 kb on + strand at 772.568 kb on + strand at 772.568 kb on + strand at 772.568 kb on + strand at 772.568 kb on + strand at 772.568 kb on + strand at 772.568 kb on + strand at 772.568 kb on + strand at 772.568 kb on + strand at 772.568 kb on + strand at 772.568 kb on + strand at 772.568 kb on + strand at 772.568 kb on + strand at 772.568 kb on + strand at 772.568 kb on + strand at 772.568 kb on + strand at 772.568 kb on + strand at 772.568 kb on + strand at 772.568 kb on + strand at 772.568 kb on + strand at 772.568 kb on + strand at 772.568 kb on + strand at 772.568 kb on + strand at 772.569 kb on - strand at 772.569 kb on - strand at 772.569 kb on - strand at 772.569 kb on - strand at 772.569 kb on - strand at 772.569 kb on - strand at 772.569 kb on - strand at 772.569 kb on - strand at 772.569 kb on - strand at 772.569 kb on - strand at 772.569 kb on - strand at 772.569 kb on - strand at 772.569 kb on - strand at 772.569 kb on - strand at 772.569 kb on - strand at 772.569 kb on - strand at 772.569 kb on - strand at 772.569 kb on - strand at 772.569 kb on - strand at 772.569 kb on - strand at 772.569 kb on - strand at 772.569 kb on - strand at 772.569 kb on - strand at 772.569 kb on - strand at 772.569 kb on - strand at 772.569 kb on - strand at 772.569 kb on - strand at 772.569 kb on - strand at 772.569 kb on - strand at 772.569 kb on - strand at 772.569 kb on - strand at 772.569 kb on - strand at 772.569 kb on - strand at 772.569 kb on - strand at 772.569 kb on - strand at 772.569 kb on - strand at 772.577 kb on + strand at 772.578 kb on - strand at 772.610 kb on + strand at 772.610 kb on + strand at 772.610 kb on + strand at 772.610 kb on + strand at 772.610 kb on + strand at 772.610 kb on + strand at 772.610 kb on + strand at 772.610 kb on + strand at 772.610 kb on + strand at 772.610 kb on + strand at 772.610 kb on + strand at 772.610 kb on + strand at 772.610 kb on + strand at 772.610 kb on + strand at 772.611 kb on - strand at 772.611 kb on - strand at 772.611 kb on - strand at 772.611 kb on - strand at 772.611 kb on - strand at 772.611 kb on - strand at 772.611 kb on - strand at 772.611 kb on - strand at 772.611 kb on - strand at 772.611 kb on - strand at 772.611 kb on - strand at 772.611 kb on - strand at 772.634 kb on + strand at 772.634 kb on + strand at 772.634 kb on + strand at 772.634 kb on + strand at 772.634 kb on + strand at 772.634 kb on + strand at 772.635 kb on - strand at 772.635 kb on - strand at 772.635 kb on - strand at 772.635 kb on - strand at 772.635 kb on - strand at 772.655 kb on + strand, within MPMX19_05243 at 772.655 kb on + strand, within MPMX19_05243 at 772.655 kb on + strand, within MPMX19_05243 at 772.655 kb on + strand, within MPMX19_05243 at 772.655 kb on + strand, within MPMX19_05243 at 772.655 kb on + strand, within MPMX19_05243 at 772.655 kb on + strand, within MPMX19_05243 at 772.656 kb on - strand, within MPMX19_05243 at 772.656 kb on - strand, within MPMX19_05243 at 772.656 kb on - strand, within MPMX19_05243 at 772.656 kb on - strand, within MPMX19_05243 at 772.656 kb on - strand, within MPMX19_05243
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 770,190 - MPMX19_05240 0.36 -0.2 770,204 + MPMX19_05240 0.37 -0.4 770,204 + MPMX19_05240 0.37 -0.4 770,204 + MPMX19_05240 0.37 +0.1 770,204 + MPMX19_05240 0.37 -2.2 770,204 + MPMX19_05240 0.37 -0.6 770,204 + MPMX19_05240 0.37 -2.1 770,204 + MPMX19_05240 0.37 +1.1 770,204 + MPMX19_05240 0.37 -1.5 770,204 + MPMX19_05240 0.37 +0.3 770,204 + MPMX19_05240 0.37 -1.0 770,205 - MPMX19_05240 0.37 -1.6 770,205 - MPMX19_05240 0.37 -0.6 770,205 - MPMX19_05240 0.37 -1.0 770,205 - MPMX19_05240 0.37 +0.6 770,205 - MPMX19_05240 0.37 -1.9 770,205 - MPMX19_05240 0.37 -1.6 770,205 - MPMX19_05240 0.37 -1.0 770,205 - MPMX19_05240 0.37 -0.4 770,205 - MPMX19_05240 0.37 -0.3 770,205 - MPMX19_05240 0.37 -2.3 770,205 - MPMX19_05240 0.37 -1.4 770,205 - MPMX19_05240 0.37 +0.3 770,205 - MPMX19_05240 0.37 -0.7 770,205 - MPMX19_05240 0.37 +0.4 770,205 - MPMX19_05240 0.37 -0.2 770,229 + MPMX19_05240 0.40 -0.2 770,229 + MPMX19_05240 0.40 -0.7 770,229 + MPMX19_05240 0.40 -1.2 770,229 + MPMX19_05240 0.40 -1.4 770,230 - MPMX19_05240 0.40 -1.0 770,230 - MPMX19_05240 0.40 -0.0 770,230 - MPMX19_05240 0.40 +0.5 770,230 - MPMX19_05240 0.40 +1.3 770,230 - MPMX19_05240 0.40 -0.5 770,230 - MPMX19_05240 0.40 +0.7 770,230 - MPMX19_05240 0.40 -1.2 770,350 + MPMX19_05240 0.52 -0.5 770,350 + MPMX19_05240 0.52 -0.4 770,350 + MPMX19_05240 0.52 -0.3 770,350 + MPMX19_05240 0.52 +0.7 770,351 - MPMX19_05240 0.52 -0.9 770,351 - MPMX19_05240 0.52 -1.0 770,839 + +1.1 770,839 + +0.6 770,839 + -2.7 770,839 + +0.1 770,839 + +0.1 770,839 + -0.7 770,839 + -1.0 770,839 + +0.4 770,839 + +0.3 770,839 + -0.3 770,839 + +0.3 770,839 + +0.6 770,839 + +1.7 770,839 + +1.4 770,839 + -0.0 770,839 + -1.3 770,839 + -0.6 770,840 - +0.9 770,840 - -1.2 770,840 - +0.8 770,840 - -0.5 770,840 - +0.6 770,840 - -0.4 770,840 - -1.5 770,840 - -0.7 770,946 + -0.6 770,946 + -0.8 770,946 + +0.8 770,946 + -0.4 770,946 + +0.8 770,947 - +1.4 770,947 - -0.5 770,947 - +0.7 770,947 - -0.8 770,947 - -1.8 770,978 + +0.0 770,978 + +0.1 770,978 + +0.4 770,979 - -1.0 770,979 - -0.2 770,979 - -1.7 770,979 - -0.0 770,979 - -2.2 770,997 + -1.8 770,998 - -0.9 771,016 - +0.6 771,016 - +1.1 771,099 + -0.4 771,099 + -0.6 771,099 + -0.4 771,099 + -1.2 771,099 + +0.3 771,099 + -0.1 771,099 + +0.4 771,099 + -1.0 771,099 + -2.9 771,100 - +0.7 771,100 - -0.5 771,100 - +0.6 771,100 - -1.5 771,100 - -0.6 771,100 - -0.0 771,100 - -0.8 771,100 - -0.2 771,100 - +0.8 771,100 - -1.5 771,100 - -0.5 771,100 - +1.2 771,100 - -0.2 771,100 - +1.7 771,100 - -1.7 771,100 - -2.2 771,100 - -0.7 771,246 + MPMX19_05241 0.30 +0.8 771,246 + MPMX19_05241 0.30 -0.4 771,247 - MPMX19_05241 0.30 -1.0 771,423 + MPMX19_05241 0.57 +1.4 771,423 + MPMX19_05241 0.57 +0.3 771,423 + MPMX19_05241 0.57 +0.5 771,424 - MPMX19_05241 0.57 -1.0 771,424 - MPMX19_05241 0.57 +0.0 771,424 - MPMX19_05241 0.57 +0.1 771,522 + MPMX19_05241 0.72 +0.7 771,522 + MPMX19_05241 0.72 +1.0 771,523 - MPMX19_05241 0.72 +0.8 771,523 - MPMX19_05241 0.72 -1.3 771,523 - MPMX19_05241 0.72 +0.3 771,559 + MPMX19_05241 0.78 -1.3 771,584 - MPMX19_05241 0.82 -0.2 771,690 + -0.2 771,690 + +0.1 771,690 + -0.5 771,690 + -1.6 771,690 + -1.2 771,690 + -0.4 771,691 - +0.6 771,691 - -1.2 771,691 - -1.7 771,691 - -1.6 771,691 - -1.3 771,691 - -0.0 771,739 + +0.6 771,739 + -1.3 771,740 - -1.3 771,740 - +0.6 772,494 + +1.3 772,495 - -1.2 772,495 - -0.2 772,495 - -0.2 772,495 - +0.4 772,495 - +0.1 772,495 - -1.7 772,495 - -1.7 772,495 - -0.2 772,495 - -1.3 772,495 - -0.2 772,495 - -1.2 772,495 - -1.7 772,495 - -0.0 772,495 - -2.2 772,495 - -1.2 772,495 - -1.3 772,495 - -0.4 772,495 - -0.6 772,495 - -0.1 772,495 - +0.0 772,568 + +1.0 772,568 + +0.4 772,568 + -0.0 772,568 + -0.7 772,568 + -0.6 772,568 + -0.8 772,568 + -1.5 772,568 + -0.5 772,568 + -1.0 772,568 + +1.1 772,568 + +0.8 772,568 + +0.8 772,568 + +0.3 772,568 + -3.5 772,568 + -0.9 772,568 + -0.2 772,568 + +1.4 772,568 + +0.3 772,568 + +0.6 772,568 + -1.0 772,568 + +0.7 772,568 + -1.5 772,568 + -0.6 772,568 + +1.4 772,568 + +0.4 772,568 + -1.8 772,568 + -1.2 772,568 + -1.0 772,568 + -1.0 772,568 + -0.4 772,568 + -0.2 772,568 + -0.2 772,568 + +0.6 772,568 + +0.4 772,568 + -0.9 772,568 + -1.1 772,568 + -1.4 772,569 - -1.7 772,569 - +0.3 772,569 - -2.0 772,569 - -1.2 772,569 - -1.0 772,569 - -0.1 772,569 - -0.7 772,569 - +0.3 772,569 - -1.3 772,569 - +0.8 772,569 - -2.3 772,569 - -2.1 772,569 - +0.5 772,569 - -1.2 772,569 - -1.2 772,569 - -1.8 772,569 - -0.7 772,569 - +1.4 772,569 - +0.3 772,569 - +0.3 772,569 - -0.3 772,569 - -0.6 772,569 - -1.2 772,569 - +0.1 772,569 - -1.9 772,569 - +0.4 772,569 - -2.2 772,569 - -0.6 772,569 - +0.3 772,569 - -0.7 772,569 - -0.9 772,569 - -1.2 772,569 - -1.0 772,569 - -0.5 772,569 - +0.8 772,569 - -0.0 772,577 + +0.4 772,578 - -0.6 772,610 + -0.8 772,610 + -0.9 772,610 + -1.4 772,610 + -1.0 772,610 + -1.3 772,610 + +0.0 772,610 + -0.6 772,610 + -1.8 772,610 + -0.7 772,610 + -0.8 772,610 + -0.5 772,610 + -1.5 772,610 + -1.5 772,610 + -0.6 772,611 - -2.3 772,611 - -0.6 772,611 - -0.4 772,611 - -1.0 772,611 - +0.3 772,611 - -1.1 772,611 - -1.0 772,611 - +0.1 772,611 - -0.8 772,611 - +0.2 772,611 - +0.1 772,611 - -0.5 772,634 + -0.4 772,634 + +0.4 772,634 + +0.5 772,634 + -0.4 772,634 + -0.9 772,634 + -0.9 772,635 - +0.8 772,635 - +0.6 772,635 - +0.6 772,635 - -0.5 772,635 - -1.0 772,655 + MPMX19_05243 0.12 -1.3 772,655 + MPMX19_05243 0.12 -0.6 772,655 + MPMX19_05243 0.12 -2.7 772,655 + MPMX19_05243 0.12 -0.2 772,655 + MPMX19_05243 0.12 +0.4 772,655 + MPMX19_05243 0.12 -0.7 772,655 + MPMX19_05243 0.12 -0.4 772,656 - MPMX19_05243 0.12 -0.3 772,656 - MPMX19_05243 0.12 +0.8 772,656 - MPMX19_05243 0.12 -0.2 772,656 - MPMX19_05243 0.12 -1.2 772,656 - MPMX19_05243 0.12 +1.1
Or see this region's nucleotide sequence