Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_05055 and MPMX19_05056 are separated by 154 nucleotides MPMX19_05056 and MPMX19_05057 are separated by 122 nucleotides MPMX19_05057 and MPMX19_05058 are separated by 184 nucleotides MPMX19_05058 and MPMX19_05059 overlap by 10 nucleotides
MPMX19_05055: MPMX19_05055 - Phosphoserine aminotransferase, at 540,887 to 542,074
_05055
MPMX19_05056: MPMX19_05056 - hypothetical protein, at 542,229 to 542,696
_05056
MPMX19_05057: MPMX19_05057 - hypothetical protein, at 542,819 to 543,184
_05057
MPMX19_05058: MPMX19_05058 - hypothetical protein, at 543,369 to 543,596
_05058
MPMX19_05059: MPMX19_05059 - hypothetical protein, at 543,587 to 544,339
_05059
Position (kb) 542
543 Strain fitness (log2 ratio) -2
-1
0
1
2 at 542.138 kb on - strand at 542.138 kb on - strand at 542.138 kb on - strand at 542.138 kb on - strand at 542.138 kb on - strand at 542.138 kb on - strand at 542.138 kb on - strand at 542.181 kb on + strand at 542.181 kb on + strand at 542.230 kb on + strand at 542.231 kb on - strand at 542.231 kb on - strand at 542.231 kb on - strand at 542.260 kb on + strand at 542.260 kb on + strand at 542.261 kb on - strand at 542.261 kb on - strand at 542.261 kb on - strand at 542.366 kb on - strand, within MPMX19_05056 at 542.476 kb on + strand, within MPMX19_05056 at 542.476 kb on - strand, within MPMX19_05056 at 542.477 kb on - strand, within MPMX19_05056 at 542.511 kb on - strand, within MPMX19_05056 at 542.684 kb on + strand at 542.684 kb on + strand at 542.684 kb on + strand at 542.684 kb on + strand at 542.684 kb on + strand at 542.684 kb on + strand at 542.684 kb on + strand at 542.684 kb on + strand at 542.684 kb on + strand at 542.685 kb on - strand at 542.685 kb on - strand at 542.685 kb on - strand at 542.685 kb on - strand at 542.685 kb on - strand at 542.685 kb on - strand at 542.685 kb on - strand at 542.685 kb on - strand at 542.685 kb on - strand at 542.685 kb on - strand at 542.685 kb on - strand at 542.685 kb on - strand at 542.685 kb on - strand at 542.685 kb on - strand at 542.738 kb on - strand at 542.756 kb on + strand at 542.756 kb on + strand at 542.756 kb on + strand at 542.756 kb on + strand at 542.756 kb on + strand at 542.756 kb on + strand at 542.756 kb on + strand at 542.757 kb on - strand at 542.757 kb on - strand at 542.757 kb on - strand at 542.757 kb on - strand at 542.757 kb on - strand at 542.871 kb on + strand, within MPMX19_05057 at 542.872 kb on - strand, within MPMX19_05057 at 542.892 kb on + strand, within MPMX19_05057 at 542.892 kb on + strand, within MPMX19_05057 at 542.892 kb on + strand, within MPMX19_05057 at 542.892 kb on + strand, within MPMX19_05057 at 542.892 kb on + strand, within MPMX19_05057 at 542.892 kb on + strand, within MPMX19_05057 at 542.892 kb on + strand, within MPMX19_05057 at 542.892 kb on + strand, within MPMX19_05057 at 542.892 kb on + strand, within MPMX19_05057 at 542.892 kb on + strand, within MPMX19_05057 at 542.892 kb on + strand, within MPMX19_05057 at 542.892 kb on + strand, within MPMX19_05057 at 542.892 kb on + strand, within MPMX19_05057 at 542.892 kb on + strand, within MPMX19_05057 at 542.892 kb on + strand, within MPMX19_05057 at 542.892 kb on + strand, within MPMX19_05057 at 542.892 kb on + strand, within MPMX19_05057 at 542.892 kb on + strand, within MPMX19_05057 at 542.893 kb on - strand, within MPMX19_05057 at 542.893 kb on - strand, within MPMX19_05057 at 542.893 kb on - strand, within MPMX19_05057 at 542.893 kb on - strand, within MPMX19_05057 at 542.893 kb on - strand, within MPMX19_05057 at 542.893 kb on - strand, within MPMX19_05057 at 542.893 kb on - strand, within MPMX19_05057 at 542.893 kb on - strand, within MPMX19_05057 at 542.893 kb on - strand, within MPMX19_05057 at 542.893 kb on - strand, within MPMX19_05057 at 542.893 kb on - strand, within MPMX19_05057 at 542.893 kb on - strand, within MPMX19_05057 at 542.893 kb on - strand, within MPMX19_05057 at 542.893 kb on - strand, within MPMX19_05057 at 542.893 kb on - strand, within MPMX19_05057 at 542.893 kb on - strand, within MPMX19_05057 at 542.923 kb on - strand, within MPMX19_05057 at 542.923 kb on - strand, within MPMX19_05057 at 542.943 kb on + strand, within MPMX19_05057 at 542.943 kb on + strand, within MPMX19_05057 at 542.943 kb on + strand, within MPMX19_05057 at 542.943 kb on + strand, within MPMX19_05057 at 542.943 kb on + strand, within MPMX19_05057 at 542.943 kb on + strand, within MPMX19_05057 at 542.943 kb on + strand, within MPMX19_05057 at 542.943 kb on + strand, within MPMX19_05057 at 542.943 kb on + strand, within MPMX19_05057 at 542.943 kb on + strand, within MPMX19_05057 at 542.943 kb on + strand, within MPMX19_05057 at 542.944 kb on - strand, within MPMX19_05057 at 542.944 kb on - strand, within MPMX19_05057 at 542.944 kb on - strand, within MPMX19_05057 at 542.944 kb on - strand, within MPMX19_05057 at 542.944 kb on - strand, within MPMX19_05057 at 542.944 kb on - strand, within MPMX19_05057 at 542.964 kb on + strand, within MPMX19_05057 at 542.964 kb on + strand, within MPMX19_05057 at 542.964 kb on + strand, within MPMX19_05057 at 542.965 kb on - strand, within MPMX19_05057 at 542.965 kb on - strand, within MPMX19_05057 at 542.965 kb on - strand, within MPMX19_05057 at 542.965 kb on - strand, within MPMX19_05057 at 542.965 kb on - strand, within MPMX19_05057 at 542.965 kb on - strand, within MPMX19_05057 at 542.967 kb on + strand, within MPMX19_05057 at 542.968 kb on - strand, within MPMX19_05057 at 542.968 kb on - strand, within MPMX19_05057 at 543.166 kb on + strand at 543.166 kb on + strand at 543.167 kb on - strand at 543.167 kb on - strand at 543.210 kb on + strand at 543.210 kb on + strand at 543.211 kb on - strand at 543.211 kb on - strand at 543.211 kb on - strand at 543.285 kb on + strand at 543.285 kb on + strand at 543.285 kb on + strand at 543.286 kb on - strand at 543.297 kb on + strand at 543.297 kb on + strand at 543.297 kb on + strand at 543.298 kb on - strand at 543.351 kb on + strand at 543.351 kb on + strand at 543.352 kb on - strand at 543.352 kb on - strand at 543.356 kb on + strand at 543.356 kb on + strand at 543.356 kb on + strand at 543.356 kb on + strand at 543.357 kb on - strand at 543.357 kb on - strand at 543.357 kb on - strand at 543.357 kb on - strand at 543.357 kb on - strand at 543.357 kb on - strand at 543.357 kb on - strand at 543.373 kb on + strand at 543.373 kb on + strand at 543.373 kb on + strand at 543.374 kb on - strand at 543.374 kb on - strand at 543.374 kb on - strand at 543.561 kb on + strand, within MPMX19_05058 at 543.594 kb on + strand at 543.594 kb on + strand at 543.594 kb on + strand at 543.594 kb on + strand at 543.594 kb on + strand at 543.594 kb on + strand at 543.594 kb on + strand at 543.594 kb on + strand at 543.595 kb on - strand at 543.595 kb on - strand at 543.595 kb on - strand at 543.648 kb on + strand at 543.648 kb on + strand at 543.648 kb on + strand at 543.648 kb on + strand at 543.648 kb on + strand at 543.648 kb on + strand at 543.648 kb on + strand at 543.648 kb on + strand at 543.648 kb on + strand at 543.648 kb on + strand at 543.648 kb on + strand at 543.648 kb on + strand at 543.648 kb on + strand at 543.648 kb on + strand at 543.648 kb on + strand at 543.648 kb on + strand at 543.648 kb on + strand at 543.648 kb on + strand at 543.648 kb on + strand at 543.649 kb on - strand at 543.649 kb on - strand at 543.649 kb on - strand at 543.649 kb on - strand at 543.649 kb on - strand at 543.649 kb on - strand at 543.649 kb on - strand at 543.649 kb on - strand at 543.649 kb on - strand at 543.649 kb on - strand at 543.649 kb on - strand at 543.649 kb on - strand at 543.649 kb on - strand at 543.649 kb on - strand at 543.649 kb on - strand at 543.649 kb on - strand at 543.649 kb on - strand at 543.649 kb on - strand at 543.649 kb on - strand at 543.649 kb on - strand at 543.649 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 542,138 - -0.4 542,138 - -0.4 542,138 - -0.6 542,138 - +1.2 542,138 - +1.5 542,138 - -0.3 542,138 - +0.9 542,181 + -0.6 542,181 + +0.1 542,230 + +0.7 542,231 - -0.0 542,231 - -1.9 542,231 - -0.7 542,260 + -1.7 542,260 + +0.2 542,261 - -1.1 542,261 - -0.5 542,261 - +0.1 542,366 - MPMX19_05056 0.29 +0.1 542,476 + MPMX19_05056 0.53 -1.6 542,476 - MPMX19_05056 0.53 +0.1 542,477 - MPMX19_05056 0.53 -0.5 542,511 - MPMX19_05056 0.60 -0.2 542,684 + -2.5 542,684 + -0.7 542,684 + -1.3 542,684 + -2.3 542,684 + +0.5 542,684 + -0.9 542,684 + -1.5 542,684 + -1.6 542,684 + +0.3 542,685 - -0.7 542,685 - +1.5 542,685 - +0.5 542,685 - -1.7 542,685 - -0.1 542,685 - -1.5 542,685 - -0.1 542,685 - -0.0 542,685 - +0.6 542,685 - -1.5 542,685 - -1.2 542,685 - -0.4 542,685 - +0.6 542,685 - -1.4 542,738 - -1.1 542,756 + +0.0 542,756 + -1.4 542,756 + -0.6 542,756 + +0.4 542,756 + -1.1 542,756 + -0.8 542,756 + -0.9 542,757 - -0.6 542,757 - -0.5 542,757 - -1.4 542,757 - +0.5 542,757 - -1.1 542,871 + MPMX19_05057 0.14 -0.6 542,872 - MPMX19_05057 0.14 -1.2 542,892 + MPMX19_05057 0.20 -1.4 542,892 + MPMX19_05057 0.20 -1.4 542,892 + MPMX19_05057 0.20 -0.4 542,892 + MPMX19_05057 0.20 -1.5 542,892 + MPMX19_05057 0.20 -2.1 542,892 + MPMX19_05057 0.20 -0.5 542,892 + MPMX19_05057 0.20 -1.0 542,892 + MPMX19_05057 0.20 -0.5 542,892 + MPMX19_05057 0.20 -1.3 542,892 + MPMX19_05057 0.20 -0.7 542,892 + MPMX19_05057 0.20 -1.0 542,892 + MPMX19_05057 0.20 -2.3 542,892 + MPMX19_05057 0.20 -1.0 542,892 + MPMX19_05057 0.20 -1.4 542,892 + MPMX19_05057 0.20 -0.9 542,892 + MPMX19_05057 0.20 -0.4 542,892 + MPMX19_05057 0.20 -0.4 542,892 + MPMX19_05057 0.20 +0.6 542,893 - MPMX19_05057 0.20 +1.5 542,893 - MPMX19_05057 0.20 -1.1 542,893 - MPMX19_05057 0.20 +0.5 542,893 - MPMX19_05057 0.20 -0.4 542,893 - MPMX19_05057 0.20 -0.1 542,893 - MPMX19_05057 0.20 +0.6 542,893 - MPMX19_05057 0.20 -1.1 542,893 - MPMX19_05057 0.20 -0.1 542,893 - MPMX19_05057 0.20 -0.0 542,893 - MPMX19_05057 0.20 -2.4 542,893 - MPMX19_05057 0.20 -1.5 542,893 - MPMX19_05057 0.20 +0.9 542,893 - MPMX19_05057 0.20 +1.1 542,893 - MPMX19_05057 0.20 -1.7 542,893 - MPMX19_05057 0.20 +0.3 542,893 - MPMX19_05057 0.20 -0.1 542,923 - MPMX19_05057 0.28 -0.5 542,923 - MPMX19_05057 0.28 +0.5 542,943 + MPMX19_05057 0.34 -0.8 542,943 + MPMX19_05057 0.34 -0.1 542,943 + MPMX19_05057 0.34 +0.5 542,943 + MPMX19_05057 0.34 -0.4 542,943 + MPMX19_05057 0.34 -1.0 542,943 + MPMX19_05057 0.34 -1.4 542,943 + MPMX19_05057 0.34 -0.1 542,943 + MPMX19_05057 0.34 -0.5 542,943 + MPMX19_05057 0.34 -1.0 542,943 + MPMX19_05057 0.34 -0.3 542,943 + MPMX19_05057 0.34 -0.6 542,944 - MPMX19_05057 0.34 -1.2 542,944 - MPMX19_05057 0.34 +0.3 542,944 - MPMX19_05057 0.34 -1.8 542,944 - MPMX19_05057 0.34 -1.1 542,944 - MPMX19_05057 0.34 -1.4 542,944 - MPMX19_05057 0.34 -2.2 542,964 + MPMX19_05057 0.40 -1.5 542,964 + MPMX19_05057 0.40 -1.5 542,964 + MPMX19_05057 0.40 -2.6 542,965 - MPMX19_05057 0.40 -0.0 542,965 - MPMX19_05057 0.40 +1.5 542,965 - MPMX19_05057 0.40 +0.1 542,965 - MPMX19_05057 0.40 -1.1 542,965 - MPMX19_05057 0.40 -1.7 542,965 - MPMX19_05057 0.40 -0.4 542,967 + MPMX19_05057 0.40 -1.1 542,968 - MPMX19_05057 0.41 -0.4 542,968 - MPMX19_05057 0.41 +0.3 543,166 + -1.4 543,166 + -0.1 543,167 - -0.7 543,167 - -2.4 543,210 + -2.4 543,210 + -2.0 543,211 - -2.5 543,211 - +0.5 543,211 - -0.5 543,285 + -0.1 543,285 + -0.1 543,285 + -1.1 543,286 - +0.6 543,297 + -0.2 543,297 + -1.2 543,297 + -0.6 543,298 - +1.7 543,351 + -0.5 543,351 + -0.9 543,352 - +0.5 543,352 - -1.4 543,356 + -1.0 543,356 + -1.9 543,356 + -1.4 543,356 + -0.8 543,357 - -0.4 543,357 - -0.4 543,357 - -0.5 543,357 - -1.1 543,357 - -0.9 543,357 - +0.1 543,357 - +0.0 543,373 + +0.1 543,373 + +0.9 543,373 + -0.9 543,374 - -0.7 543,374 - -0.5 543,374 - +0.3 543,561 + MPMX19_05058 0.84 -0.5 543,594 + +0.0 543,594 + -1.5 543,594 + -1.5 543,594 + +0.7 543,594 + +0.2 543,594 + -0.0 543,594 + +0.5 543,594 + -0.1 543,595 - -0.5 543,595 - -1.2 543,595 - +0.5 543,648 + -0.3 543,648 + -0.3 543,648 + +0.1 543,648 + +0.9 543,648 + +1.2 543,648 + +0.1 543,648 + +0.9 543,648 + -0.7 543,648 + -0.5 543,648 + -1.2 543,648 + -1.8 543,648 + -0.1 543,648 + -0.7 543,648 + -0.0 543,648 + -1.0 543,648 + -1.1 543,648 + +0.1 543,648 + -1.5 543,648 + +0.1 543,649 - -1.6 543,649 - -0.2 543,649 - +0.5 543,649 - -0.1 543,649 - -2.2 543,649 - -1.0 543,649 - +0.9 543,649 - -0.1 543,649 - +0.1 543,649 - -0.9 543,649 - +0.7 543,649 - -0.5 543,649 - -1.2 543,649 - -1.0 543,649 - +0.7 543,649 - -0.9 543,649 - +0.3 543,649 - -0.4 543,649 - +0.6 543,649 - -0.5 543,649 - +2.5
Or see this region's nucleotide sequence