Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_04051 and MPMX19_04052 are separated by 114 nucleotides MPMX19_04052 and MPMX19_04053 are separated by 269 nucleotides
MPMX19_04051: MPMX19_04051 - Alcohol dehydrogenase, at 353,794 to 354,867
_04051
MPMX19_04052: MPMX19_04052 - putative sugar-binding periplasmic protein, at 354,982 to 356,274
_04052
MPMX19_04053: MPMX19_04053 - Transcriptional regulatory protein OmpR, at 356,544 to 357,293
_04053
Position (kb) 354
355
356
357 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 354.187 kb on + strand, within MPMX19_04051 at 354.187 kb on + strand, within MPMX19_04051 at 354.187 kb on + strand, within MPMX19_04051 at 354.188 kb on - strand, within MPMX19_04051 at 354.188 kb on - strand, within MPMX19_04051 at 354.622 kb on + strand, within MPMX19_04051 at 354.622 kb on + strand, within MPMX19_04051 at 354.622 kb on + strand, within MPMX19_04051 at 354.622 kb on + strand, within MPMX19_04051 at 354.623 kb on - strand, within MPMX19_04051 at 354.623 kb on - strand, within MPMX19_04051 at 354.623 kb on - strand, within MPMX19_04051 at 354.623 kb on - strand, within MPMX19_04051 at 354.811 kb on + strand at 354.811 kb on + strand at 354.811 kb on + strand at 354.811 kb on + strand at 354.812 kb on - strand at 354.812 kb on - strand at 354.812 kb on - strand at 354.812 kb on - strand at 354.812 kb on - strand at 354.812 kb on - strand at 354.812 kb on - strand at 354.812 kb on - strand at 354.812 kb on - strand at 354.983 kb on + strand at 354.983 kb on + strand at 354.983 kb on + strand at 354.983 kb on + strand at 354.983 kb on + strand at 354.983 kb on + strand at 354.983 kb on + strand at 354.983 kb on + strand at 354.983 kb on + strand at 354.983 kb on + strand at 354.983 kb on + strand at 354.983 kb on + strand at 354.983 kb on + strand at 354.983 kb on + strand at 354.983 kb on + strand at 354.983 kb on + strand at 354.983 kb on + strand at 354.983 kb on + strand at 354.983 kb on + strand at 354.983 kb on + strand at 354.983 kb on + strand at 354.983 kb on + strand at 354.983 kb on + strand at 354.984 kb on - strand at 354.984 kb on - strand at 354.984 kb on - strand at 354.984 kb on - strand at 354.984 kb on - strand at 354.984 kb on - strand at 354.984 kb on - strand at 354.984 kb on - strand at 354.984 kb on - strand at 354.984 kb on - strand at 354.984 kb on - strand at 354.984 kb on - strand at 354.984 kb on - strand at 354.984 kb on - strand at 354.984 kb on - strand at 354.984 kb on - strand at 354.984 kb on - strand at 354.984 kb on - strand at 354.984 kb on - strand at 354.984 kb on - strand at 354.984 kb on - strand at 354.984 kb on - strand at 354.984 kb on - strand at 354.984 kb on - strand at 354.984 kb on - strand at 354.984 kb on - strand at 354.984 kb on - strand at 354.984 kb on - strand at 354.984 kb on - strand at 354.984 kb on - strand at 354.984 kb on - strand at 354.984 kb on - strand at 354.984 kb on - strand at 354.984 kb on - strand at 355.230 kb on + strand, within MPMX19_04052 at 355.230 kb on + strand, within MPMX19_04052 at 355.231 kb on - strand, within MPMX19_04052 at 355.231 kb on - strand, within MPMX19_04052 at 355.352 kb on + strand, within MPMX19_04052 at 355.352 kb on + strand, within MPMX19_04052 at 355.352 kb on + strand, within MPMX19_04052 at 355.352 kb on + strand, within MPMX19_04052 at 355.353 kb on - strand, within MPMX19_04052 at 355.353 kb on - strand, within MPMX19_04052 at 355.353 kb on - strand, within MPMX19_04052 at 355.353 kb on - strand, within MPMX19_04052 at 355.353 kb on - strand, within MPMX19_04052 at 355.353 kb on - strand, within MPMX19_04052 at 355.353 kb on - strand, within MPMX19_04052 at 355.353 kb on - strand, within MPMX19_04052 at 355.353 kb on - strand, within MPMX19_04052 at 355.353 kb on - strand, within MPMX19_04052 at 355.523 kb on + strand, within MPMX19_04052 at 355.524 kb on - strand, within MPMX19_04052 at 355.524 kb on - strand, within MPMX19_04052 at 355.835 kb on + strand, within MPMX19_04052 at 355.835 kb on + strand, within MPMX19_04052 at 355.835 kb on + strand, within MPMX19_04052 at 355.835 kb on + strand, within MPMX19_04052 at 355.836 kb on - strand, within MPMX19_04052 at 355.836 kb on - strand, within MPMX19_04052 at 355.836 kb on - strand, within MPMX19_04052 at 355.836 kb on - strand, within MPMX19_04052 at 355.838 kb on + strand, within MPMX19_04052 at 355.838 kb on + strand, within MPMX19_04052 at 355.838 kb on + strand, within MPMX19_04052 at 355.838 kb on + strand, within MPMX19_04052 at 355.838 kb on + strand, within MPMX19_04052 at 355.838 kb on + strand, within MPMX19_04052 at 355.838 kb on + strand, within MPMX19_04052 at 355.838 kb on + strand, within MPMX19_04052 at 355.839 kb on - strand, within MPMX19_04052 at 355.839 kb on - strand, within MPMX19_04052 at 355.839 kb on - strand, within MPMX19_04052 at 355.839 kb on - strand, within MPMX19_04052 at 355.839 kb on - strand, within MPMX19_04052 at 355.839 kb on - strand, within MPMX19_04052 at 355.839 kb on - strand, within MPMX19_04052 at 355.839 kb on - strand, within MPMX19_04052 at 355.839 kb on - strand, within MPMX19_04052 at 355.839 kb on - strand, within MPMX19_04052 at 355.839 kb on - strand, within MPMX19_04052 at 355.839 kb on - strand, within MPMX19_04052 at 355.839 kb on - strand, within MPMX19_04052 at 355.839 kb on - strand, within MPMX19_04052 at 355.839 kb on - strand, within MPMX19_04052 at 355.850 kb on + strand, within MPMX19_04052 at 355.850 kb on + strand, within MPMX19_04052 at 355.850 kb on + strand, within MPMX19_04052 at 355.850 kb on + strand, within MPMX19_04052 at 355.850 kb on + strand, within MPMX19_04052 at 355.850 kb on + strand, within MPMX19_04052 at 355.850 kb on + strand, within MPMX19_04052 at 355.851 kb on - strand, within MPMX19_04052 at 355.851 kb on - strand, within MPMX19_04052 at 355.851 kb on - strand, within MPMX19_04052 at 355.851 kb on - strand, within MPMX19_04052 at 355.851 kb on - strand, within MPMX19_04052 at 355.851 kb on - strand, within MPMX19_04052 at 355.851 kb on - strand, within MPMX19_04052 at 355.851 kb on - strand, within MPMX19_04052 at 355.851 kb on - strand, within MPMX19_04052 at 355.851 kb on - strand, within MPMX19_04052 at 356.138 kb on + strand, within MPMX19_04052 at 356.138 kb on + strand, within MPMX19_04052 at 356.139 kb on - strand, within MPMX19_04052 at 356.139 kb on - strand, within MPMX19_04052 at 356.139 kb on - strand, within MPMX19_04052 at 356.139 kb on - strand, within MPMX19_04052 at 356.139 kb on - strand, within MPMX19_04052 at 356.139 kb on - strand, within MPMX19_04052 at 356.139 kb on - strand, within MPMX19_04052 at 356.139 kb on - strand, within MPMX19_04052 at 356.139 kb on - strand, within MPMX19_04052 at 356.139 kb on - strand, within MPMX19_04052 at 356.396 kb on + strand at 356.416 kb on + strand at 356.416 kb on + strand at 356.416 kb on + strand at 356.416 kb on + strand at 356.427 kb on + strand at 356.427 kb on + strand at 356.428 kb on - strand at 356.428 kb on - strand at 356.453 kb on + strand at 356.454 kb on - strand at 356.454 kb on - strand at 356.475 kb on + strand at 356.475 kb on + strand at 356.475 kb on + strand at 356.475 kb on + strand at 356.475 kb on + strand at 356.475 kb on + strand at 356.475 kb on + strand at 356.475 kb on + strand at 356.476 kb on - strand at 356.476 kb on - strand at 356.476 kb on - strand at 356.476 kb on - strand at 356.476 kb on - strand at 356.476 kb on - strand at 356.844 kb on + strand, within MPMX19_04053 at 356.844 kb on + strand, within MPMX19_04053 at 356.844 kb on + strand, within MPMX19_04053 at 356.845 kb on - strand, within MPMX19_04053 at 356.845 kb on - strand, within MPMX19_04053 at 356.845 kb on - strand, within MPMX19_04053 at 356.845 kb on - strand, within MPMX19_04053 at 357.033 kb on + strand, within MPMX19_04053 at 357.033 kb on + strand, within MPMX19_04053 at 357.034 kb on - strand, within MPMX19_04053 at 357.034 kb on - strand, within MPMX19_04053 at 357.034 kb on - strand, within MPMX19_04053 at 357.225 kb on + strand at 357.225 kb on + strand at 357.225 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 354,187 + MPMX19_04051 0.37 -0.9 354,187 + MPMX19_04051 0.37 -1.9 354,187 + MPMX19_04051 0.37 -2.3 354,188 - MPMX19_04051 0.37 +0.3 354,188 - MPMX19_04051 0.37 +0.2 354,622 + MPMX19_04051 0.77 -1.6 354,622 + MPMX19_04051 0.77 -1.6 354,622 + MPMX19_04051 0.77 +0.9 354,622 + MPMX19_04051 0.77 -0.9 354,623 - MPMX19_04051 0.77 -1.1 354,623 - MPMX19_04051 0.77 +1.3 354,623 - MPMX19_04051 0.77 -0.4 354,623 - MPMX19_04051 0.77 -0.1 354,811 + -0.6 354,811 + -0.5 354,811 + -1.3 354,811 + -1.4 354,812 - -0.9 354,812 - -0.3 354,812 - -1.2 354,812 - -0.3 354,812 - -0.8 354,812 - -0.3 354,812 - -0.9 354,812 - +1.3 354,812 - -0.9 354,983 + -1.1 354,983 + +0.8 354,983 + -0.1 354,983 + -1.1 354,983 + +0.7 354,983 + -0.3 354,983 + -0.7 354,983 + -1.6 354,983 + -0.4 354,983 + +0.3 354,983 + -0.5 354,983 + -1.4 354,983 + -0.2 354,983 + -0.3 354,983 + -0.7 354,983 + +0.7 354,983 + -1.1 354,983 + -0.1 354,983 + -0.6 354,983 + -1.4 354,983 + -0.7 354,983 + -0.5 354,983 + -1.2 354,984 - -1.3 354,984 - -1.3 354,984 - -2.6 354,984 - -1.4 354,984 - -1.0 354,984 - -0.3 354,984 - -0.6 354,984 - -1.3 354,984 - +0.4 354,984 - +0.7 354,984 - -0.5 354,984 - +0.7 354,984 - -1.1 354,984 - -1.4 354,984 - -0.5 354,984 - -1.7 354,984 - -1.5 354,984 - +0.5 354,984 - -1.1 354,984 - -0.3 354,984 - +0.5 354,984 - -1.6 354,984 - +0.7 354,984 - +0.6 354,984 - -1.7 354,984 - +1.3 354,984 - -2.2 354,984 - -1.7 354,984 - -0.4 354,984 - -0.8 354,984 - +1.1 354,984 - -1.0 354,984 - -1.4 354,984 - -1.0 355,230 + MPMX19_04052 0.19 +2.9 355,230 + MPMX19_04052 0.19 +2.9 355,231 - MPMX19_04052 0.19 -0.3 355,231 - MPMX19_04052 0.19 +0.0 355,352 + MPMX19_04052 0.29 -0.1 355,352 + MPMX19_04052 0.29 -1.2 355,352 + MPMX19_04052 0.29 +0.3 355,352 + MPMX19_04052 0.29 +1.0 355,353 - MPMX19_04052 0.29 -0.5 355,353 - MPMX19_04052 0.29 -1.4 355,353 - MPMX19_04052 0.29 +1.3 355,353 - MPMX19_04052 0.29 +0.5 355,353 - MPMX19_04052 0.29 -0.5 355,353 - MPMX19_04052 0.29 -0.2 355,353 - MPMX19_04052 0.29 +0.5 355,353 - MPMX19_04052 0.29 -0.5 355,353 - MPMX19_04052 0.29 +0.0 355,353 - MPMX19_04052 0.29 +0.9 355,523 + MPMX19_04052 0.42 -1.1 355,524 - MPMX19_04052 0.42 -1.3 355,524 - MPMX19_04052 0.42 -1.4 355,835 + MPMX19_04052 0.66 +0.3 355,835 + MPMX19_04052 0.66 -0.3 355,835 + MPMX19_04052 0.66 +1.9 355,835 + MPMX19_04052 0.66 -1.6 355,836 - MPMX19_04052 0.66 +0.7 355,836 - MPMX19_04052 0.66 -0.5 355,836 - MPMX19_04052 0.66 -0.3 355,836 - MPMX19_04052 0.66 -0.4 355,838 + MPMX19_04052 0.66 -0.5 355,838 + MPMX19_04052 0.66 +0.3 355,838 + MPMX19_04052 0.66 -0.1 355,838 + MPMX19_04052 0.66 -0.1 355,838 + MPMX19_04052 0.66 -0.3 355,838 + MPMX19_04052 0.66 +0.9 355,838 + MPMX19_04052 0.66 +1.1 355,838 + MPMX19_04052 0.66 +0.3 355,839 - MPMX19_04052 0.66 +0.5 355,839 - MPMX19_04052 0.66 +0.3 355,839 - MPMX19_04052 0.66 +0.2 355,839 - MPMX19_04052 0.66 -0.2 355,839 - MPMX19_04052 0.66 -1.3 355,839 - MPMX19_04052 0.66 -1.1 355,839 - MPMX19_04052 0.66 -0.7 355,839 - MPMX19_04052 0.66 +0.5 355,839 - MPMX19_04052 0.66 +0.9 355,839 - MPMX19_04052 0.66 -2.6 355,839 - MPMX19_04052 0.66 -0.6 355,839 - MPMX19_04052 0.66 -0.8 355,839 - MPMX19_04052 0.66 -0.7 355,839 - MPMX19_04052 0.66 +1.3 355,839 - MPMX19_04052 0.66 +1.3 355,850 + MPMX19_04052 0.67 +0.5 355,850 + MPMX19_04052 0.67 -0.1 355,850 + MPMX19_04052 0.67 -0.7 355,850 + MPMX19_04052 0.67 +0.3 355,850 + MPMX19_04052 0.67 -1.2 355,850 + MPMX19_04052 0.67 +0.7 355,850 + MPMX19_04052 0.67 -1.7 355,851 - MPMX19_04052 0.67 +0.4 355,851 - MPMX19_04052 0.67 -0.1 355,851 - MPMX19_04052 0.67 +0.1 355,851 - MPMX19_04052 0.67 -0.1 355,851 - MPMX19_04052 0.67 +0.7 355,851 - MPMX19_04052 0.67 +0.7 355,851 - MPMX19_04052 0.67 +0.3 355,851 - MPMX19_04052 0.67 -0.1 355,851 - MPMX19_04052 0.67 -0.3 355,851 - MPMX19_04052 0.67 -1.5 356,138 + MPMX19_04052 0.89 -0.7 356,138 + MPMX19_04052 0.89 +0.7 356,139 - MPMX19_04052 0.89 -0.4 356,139 - MPMX19_04052 0.89 -0.5 356,139 - MPMX19_04052 0.89 +1.5 356,139 - MPMX19_04052 0.89 -1.6 356,139 - MPMX19_04052 0.89 -0.3 356,139 - MPMX19_04052 0.89 +0.1 356,139 - MPMX19_04052 0.89 +0.2 356,139 - MPMX19_04052 0.89 +0.3 356,139 - MPMX19_04052 0.89 -0.3 356,139 - MPMX19_04052 0.89 -1.1 356,396 + -1.8 356,416 + -1.4 356,416 + -1.3 356,416 + -1.1 356,416 + +0.3 356,427 + -0.4 356,427 + -2.6 356,428 - -0.9 356,428 - -0.2 356,453 + -0.1 356,454 - -0.1 356,454 - -0.9 356,475 + +0.3 356,475 + -0.7 356,475 + -0.2 356,475 + -0.5 356,475 + -0.8 356,475 + -1.9 356,475 + -0.7 356,475 + +0.3 356,476 - +0.2 356,476 - -0.3 356,476 - -1.2 356,476 - -0.7 356,476 - -1.8 356,476 - -1.4 356,844 + MPMX19_04053 0.40 -0.5 356,844 + MPMX19_04053 0.40 -0.9 356,844 + MPMX19_04053 0.40 -0.5 356,845 - MPMX19_04053 0.40 -0.3 356,845 - MPMX19_04053 0.40 +1.4 356,845 - MPMX19_04053 0.40 -0.5 356,845 - MPMX19_04053 0.40 -1.5 357,033 + MPMX19_04053 0.65 +0.5 357,033 + MPMX19_04053 0.65 +0.1 357,034 - MPMX19_04053 0.65 -1.1 357,034 - MPMX19_04053 0.65 +0.3 357,034 - MPMX19_04053 0.65 +0.1 357,225 + -0.7 357,225 + -1.2 357,225 + -1.1
Or see this region's nucleotide sequence