Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03871 and MPMX19_03872 are separated by 20 nucleotides MPMX19_03872 and MPMX19_03873 are separated by 110 nucleotides MPMX19_03873 and MPMX19_03874 are separated by 28 nucleotides MPMX19_03874 and MPMX19_03875 are separated by 178 nucleotides
MPMX19_03871: MPMX19_03871 - 3-oxoacyl-[acyl-carrier-protein] reductase FabG, at 118,475 to 119,275
_03871
MPMX19_03872: MPMX19_03872 - hypothetical protein, at 119,296 to 119,994
_03872
MPMX19_03873: MPMX19_03873 - Glutamyl-tRNA(Gln) amidotransferase subunit A, at 120,105 to 121,412
_03873
MPMX19_03874: MPMX19_03874 - hypothetical protein, at 121,441 to 121,893
_03874
MPMX19_03875: MPMX19_03875 - hypothetical protein, at 122,072 to 123,238
_03875
Position (kb)
120
121
122 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 119.180 kb on + strand, within MPMX19_03871 at 119.180 kb on + strand, within MPMX19_03871 at 119.181 kb on - strand, within MPMX19_03871 at 119.222 kb on + strand at 119.222 kb on + strand at 119.222 kb on + strand at 119.222 kb on + strand at 119.222 kb on + strand at 119.223 kb on - strand at 119.223 kb on - strand at 119.223 kb on - strand at 119.223 kb on - strand at 119.223 kb on - strand at 119.223 kb on - strand at 119.223 kb on - strand at 119.223 kb on - strand at 119.223 kb on - strand at 119.223 kb on - strand at 119.223 kb on - strand at 119.258 kb on + strand at 119.258 kb on + strand at 119.258 kb on + strand at 119.258 kb on + strand at 119.258 kb on + strand at 119.258 kb on + strand at 119.259 kb on - strand at 119.259 kb on - strand at 119.259 kb on - strand at 119.259 kb on - strand at 119.259 kb on - strand at 119.259 kb on - strand at 119.259 kb on - strand at 119.259 kb on - strand at 119.259 kb on - strand at 119.259 kb on - strand at 119.443 kb on + strand, within MPMX19_03872 at 119.479 kb on + strand, within MPMX19_03872 at 119.479 kb on + strand, within MPMX19_03872 at 119.479 kb on + strand, within MPMX19_03872 at 119.480 kb on - strand, within MPMX19_03872 at 119.480 kb on - strand, within MPMX19_03872 at 119.480 kb on - strand, within MPMX19_03872 at 119.480 kb on - strand, within MPMX19_03872 at 119.480 kb on - strand, within MPMX19_03872 at 119.480 kb on - strand, within MPMX19_03872 at 119.507 kb on - strand, within MPMX19_03872 at 119.602 kb on + strand, within MPMX19_03872 at 119.602 kb on + strand, within MPMX19_03872 at 119.602 kb on + strand, within MPMX19_03872 at 119.602 kb on + strand, within MPMX19_03872 at 119.603 kb on - strand, within MPMX19_03872 at 119.713 kb on + strand, within MPMX19_03872 at 119.713 kb on + strand, within MPMX19_03872 at 119.713 kb on + strand, within MPMX19_03872 at 119.713 kb on + strand, within MPMX19_03872 at 119.713 kb on + strand, within MPMX19_03872 at 119.714 kb on - strand, within MPMX19_03872 at 119.714 kb on - strand, within MPMX19_03872 at 119.714 kb on - strand, within MPMX19_03872 at 119.714 kb on - strand, within MPMX19_03872 at 119.714 kb on - strand, within MPMX19_03872 at 119.980 kb on + strand at 119.981 kb on - strand at 119.981 kb on - strand at 120.285 kb on + strand, within MPMX19_03873 at 120.285 kb on + strand, within MPMX19_03873 at 120.285 kb on + strand, within MPMX19_03873 at 120.285 kb on + strand, within MPMX19_03873 at 120.286 kb on - strand, within MPMX19_03873 at 120.286 kb on - strand, within MPMX19_03873 at 120.286 kb on - strand, within MPMX19_03873 at 120.286 kb on - strand, within MPMX19_03873 at 120.438 kb on + strand, within MPMX19_03873 at 120.438 kb on + strand, within MPMX19_03873 at 120.439 kb on - strand, within MPMX19_03873 at 120.439 kb on - strand, within MPMX19_03873 at 120.439 kb on - strand, within MPMX19_03873 at 120.439 kb on - strand, within MPMX19_03873 at 120.439 kb on - strand, within MPMX19_03873 at 120.439 kb on - strand, within MPMX19_03873 at 120.462 kb on + strand, within MPMX19_03873 at 120.462 kb on + strand, within MPMX19_03873 at 120.462 kb on + strand, within MPMX19_03873 at 120.773 kb on + strand, within MPMX19_03873 at 121.071 kb on + strand, within MPMX19_03873 at 121.071 kb on + strand, within MPMX19_03873 at 121.072 kb on - strand, within MPMX19_03873 at 121.072 kb on - strand, within MPMX19_03873 at 121.072 kb on - strand, within MPMX19_03873 at 121.072 kb on - strand, within MPMX19_03873 at 121.072 kb on - strand, within MPMX19_03873 at 121.565 kb on + strand, within MPMX19_03874 at 121.565 kb on + strand, within MPMX19_03874 at 121.565 kb on + strand, within MPMX19_03874 at 121.566 kb on - strand, within MPMX19_03874 at 121.577 kb on + strand, within MPMX19_03874 at 121.577 kb on + strand, within MPMX19_03874 at 121.577 kb on + strand, within MPMX19_03874 at 121.577 kb on + strand, within MPMX19_03874 at 121.578 kb on - strand, within MPMX19_03874 at 121.578 kb on - strand, within MPMX19_03874 at 121.727 kb on + strand, within MPMX19_03874 at 121.727 kb on + strand, within MPMX19_03874 at 121.727 kb on + strand, within MPMX19_03874 at 121.728 kb on - strand, within MPMX19_03874 at 121.803 kb on + strand, within MPMX19_03874 at 121.970 kb on - strand at 122.055 kb on + strand at 122.180 kb on - strand at 122.181 kb on + strand at 122.181 kb on + strand at 122.181 kb on + strand at 122.181 kb on + strand at 122.181 kb on + strand at 122.181 kb on + strand at 122.181 kb on + strand at 122.181 kb on + strand at 122.182 kb on - strand at 122.182 kb on - strand at 122.182 kb on - strand at 122.182 kb on - strand at 122.182 kb on - strand at 122.182 kb on - strand at 122.182 kb on - strand at 122.182 kb on - strand at 122.182 kb on - strand at 122.182 kb on - strand at 122.182 kb on - strand at 122.182 kb on - strand at 122.182 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 119,180 + MPMX19_03871 0.88 -0.7 119,180 + MPMX19_03871 0.88 -0.3 119,181 - MPMX19_03871 0.88 -0.7 119,222 + -0.3 119,222 + +0.2 119,222 + -0.2 119,222 + -1.3 119,222 + -0.7 119,223 - -0.2 119,223 - -1.0 119,223 - -1.5 119,223 - +0.3 119,223 - -0.2 119,223 - +1.3 119,223 - -0.4 119,223 - -1.7 119,223 - -0.7 119,223 - -1.9 119,223 - -0.5 119,258 + -0.5 119,258 + -1.0 119,258 + +0.1 119,258 + -1.0 119,258 + +0.2 119,258 + -0.2 119,259 - +0.7 119,259 - -2.2 119,259 - +0.1 119,259 - +0.4 119,259 - +1.1 119,259 - -0.0 119,259 - -2.2 119,259 - -1.0 119,259 - -1.9 119,259 - -0.7 119,443 + MPMX19_03872 0.21 -0.2 119,479 + MPMX19_03872 0.26 -2.2 119,479 + MPMX19_03872 0.26 -0.3 119,479 + MPMX19_03872 0.26 -1.3 119,480 - MPMX19_03872 0.26 -0.6 119,480 - MPMX19_03872 0.26 +0.3 119,480 - MPMX19_03872 0.26 -1.3 119,480 - MPMX19_03872 0.26 +1.5 119,480 - MPMX19_03872 0.26 -1.9 119,480 - MPMX19_03872 0.26 -0.6 119,507 - MPMX19_03872 0.30 -0.7 119,602 + MPMX19_03872 0.44 -0.7 119,602 + MPMX19_03872 0.44 +0.1 119,602 + MPMX19_03872 0.44 -1.6 119,602 + MPMX19_03872 0.44 -1.1 119,603 - MPMX19_03872 0.44 -0.2 119,713 + MPMX19_03872 0.60 -0.9 119,713 + MPMX19_03872 0.60 -1.0 119,713 + MPMX19_03872 0.60 +0.2 119,713 + MPMX19_03872 0.60 -0.9 119,713 + MPMX19_03872 0.60 -0.4 119,714 - MPMX19_03872 0.60 -0.7 119,714 - MPMX19_03872 0.60 -2.2 119,714 - MPMX19_03872 0.60 -1.2 119,714 - MPMX19_03872 0.60 -1.5 119,714 - MPMX19_03872 0.60 +0.1 119,980 + +1.6 119,981 - -2.1 119,981 - -0.0 120,285 + MPMX19_03873 0.14 -0.3 120,285 + MPMX19_03873 0.14 +0.1 120,285 + MPMX19_03873 0.14 +0.3 120,285 + MPMX19_03873 0.14 +0.1 120,286 - MPMX19_03873 0.14 -0.7 120,286 - MPMX19_03873 0.14 -1.2 120,286 - MPMX19_03873 0.14 -0.5 120,286 - MPMX19_03873 0.14 -0.8 120,438 + MPMX19_03873 0.25 -0.5 120,438 + MPMX19_03873 0.25 +1.7 120,439 - MPMX19_03873 0.26 -0.5 120,439 - MPMX19_03873 0.26 +1.9 120,439 - MPMX19_03873 0.26 -0.6 120,439 - MPMX19_03873 0.26 -2.0 120,439 - MPMX19_03873 0.26 -1.3 120,439 - MPMX19_03873 0.26 +0.7 120,462 + MPMX19_03873 0.27 -1.4 120,462 + MPMX19_03873 0.27 -1.4 120,462 + MPMX19_03873 0.27 -2.0 120,773 + MPMX19_03873 0.51 -0.7 121,071 + MPMX19_03873 0.74 -0.2 121,071 + MPMX19_03873 0.74 +1.3 121,072 - MPMX19_03873 0.74 -0.3 121,072 - MPMX19_03873 0.74 -2.4 121,072 - MPMX19_03873 0.74 -0.4 121,072 - MPMX19_03873 0.74 -2.5 121,072 - MPMX19_03873 0.74 -2.0 121,565 + MPMX19_03874 0.27 +0.5 121,565 + MPMX19_03874 0.27 -0.3 121,565 + MPMX19_03874 0.27 +0.1 121,566 - MPMX19_03874 0.28 -1.2 121,577 + MPMX19_03874 0.30 +0.0 121,577 + MPMX19_03874 0.30 +0.5 121,577 + MPMX19_03874 0.30 -1.2 121,577 + MPMX19_03874 0.30 -0.0 121,578 - MPMX19_03874 0.30 -0.7 121,578 - MPMX19_03874 0.30 +0.7 121,727 + MPMX19_03874 0.63 -1.6 121,727 + MPMX19_03874 0.63 -1.7 121,727 + MPMX19_03874 0.63 -0.7 121,728 - MPMX19_03874 0.63 -1.5 121,803 + MPMX19_03874 0.80 -1.5 121,970 - -1.5 122,055 + -0.0 122,180 - -0.8 122,181 + +1.0 122,181 + +1.3 122,181 + -0.6 122,181 + -1.4 122,181 + -1.4 122,181 + +0.3 122,181 + -0.5 122,181 + -0.7 122,182 - -0.5 122,182 - -0.6 122,182 - -1.1 122,182 - +0.5 122,182 - -1.5 122,182 - +1.3 122,182 - +0.4 122,182 - +0.3 122,182 - -0.3 122,182 - -1.1 122,182 - +1.7 122,182 - -0.7 122,182 - +0.6
Or see this region's nucleotide sequence