Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03632 and MPMX19_03633 are separated by 193 nucleotides MPMX19_03633 and MPMX19_03634 are separated by 19 nucleotides
MPMX19_03632: MPMX19_03632 - Sodium, potassium, lithium and rubidium/H(+) antiporter, at 1,067,278 to 1,068,882
_03632
MPMX19_03633: MPMX19_03633 - Ornithine cyclodeaminase, at 1,069,076 to 1,070,140
_03633
MPMX19_03634: MPMX19_03634 - Arginase, at 1,070,160 to 1,071,110
_03634
Position (kb)
1069
1070
1071 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1068.262 kb on + strand, within MPMX19_03632 at 1068.262 kb on + strand, within MPMX19_03632 at 1068.262 kb on + strand, within MPMX19_03632 at 1068.262 kb on + strand, within MPMX19_03632 at 1068.262 kb on + strand, within MPMX19_03632 at 1068.263 kb on - strand, within MPMX19_03632 at 1068.263 kb on - strand, within MPMX19_03632 at 1068.263 kb on - strand, within MPMX19_03632 at 1068.263 kb on - strand, within MPMX19_03632 at 1068.263 kb on - strand, within MPMX19_03632 at 1068.263 kb on - strand, within MPMX19_03632 at 1068.263 kb on - strand, within MPMX19_03632 at 1068.263 kb on - strand, within MPMX19_03632 at 1068.263 kb on - strand, within MPMX19_03632 at 1068.263 kb on - strand, within MPMX19_03632 at 1068.263 kb on - strand, within MPMX19_03632 at 1068.308 kb on - strand, within MPMX19_03632 at 1068.643 kb on + strand, within MPMX19_03632 at 1068.644 kb on - strand, within MPMX19_03632 at 1068.644 kb on - strand, within MPMX19_03632 at 1068.644 kb on - strand, within MPMX19_03632 at 1068.644 kb on - strand, within MPMX19_03632 at 1068.881 kb on - strand at 1068.932 kb on - strand at 1069.209 kb on + strand, within MPMX19_03633 at 1069.209 kb on + strand, within MPMX19_03633 at 1069.209 kb on + strand, within MPMX19_03633 at 1069.210 kb on - strand, within MPMX19_03633 at 1069.210 kb on - strand, within MPMX19_03633 at 1069.506 kb on + strand, within MPMX19_03633 at 1069.506 kb on + strand, within MPMX19_03633 at 1069.506 kb on + strand, within MPMX19_03633 at 1069.506 kb on + strand, within MPMX19_03633 at 1069.506 kb on + strand, within MPMX19_03633 at 1069.506 kb on + strand, within MPMX19_03633 at 1069.506 kb on + strand, within MPMX19_03633 at 1069.507 kb on - strand, within MPMX19_03633 at 1069.507 kb on - strand, within MPMX19_03633 at 1069.507 kb on - strand, within MPMX19_03633 at 1069.645 kb on - strand, within MPMX19_03633 at 1069.645 kb on - strand, within MPMX19_03633 at 1069.645 kb on - strand, within MPMX19_03633 at 1069.830 kb on + strand, within MPMX19_03633 at 1069.914 kb on + strand, within MPMX19_03633 at 1069.914 kb on + strand, within MPMX19_03633 at 1069.915 kb on - strand, within MPMX19_03633 at 1069.926 kb on + strand, within MPMX19_03633 at 1069.926 kb on + strand, within MPMX19_03633 at 1069.927 kb on - strand, within MPMX19_03633 at 1069.927 kb on - strand, within MPMX19_03633 at 1070.038 kb on - strand at 1070.038 kb on - strand at 1070.038 kb on - strand at 1070.179 kb on + strand at 1070.180 kb on - strand at 1070.614 kb on + strand, within MPMX19_03634 at 1070.614 kb on + strand, within MPMX19_03634 at 1070.615 kb on - strand, within MPMX19_03634 at 1070.644 kb on + strand, within MPMX19_03634 at 1070.644 kb on + strand, within MPMX19_03634 at 1070.644 kb on + strand, within MPMX19_03634 at 1070.644 kb on + strand, within MPMX19_03634 at 1070.644 kb on + strand, within MPMX19_03634 at 1070.645 kb on - strand, within MPMX19_03634 at 1070.645 kb on - strand, within MPMX19_03634 at 1070.645 kb on - strand, within MPMX19_03634 at 1070.645 kb on - strand, within MPMX19_03634 at 1070.645 kb on - strand, within MPMX19_03634 at 1070.645 kb on - strand, within MPMX19_03634 at 1070.645 kb on - strand, within MPMX19_03634 at 1070.845 kb on + strand, within MPMX19_03634 at 1070.846 kb on - strand, within MPMX19_03634 at 1070.846 kb on - strand, within MPMX19_03634 at 1071.104 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 1,068,262 + MPMX19_03632 0.61 -0.4 1,068,262 + MPMX19_03632 0.61 +1.2 1,068,262 + MPMX19_03632 0.61 -1.0 1,068,262 + MPMX19_03632 0.61 +0.2 1,068,262 + MPMX19_03632 0.61 -0.1 1,068,263 - MPMX19_03632 0.61 -1.2 1,068,263 - MPMX19_03632 0.61 -0.6 1,068,263 - MPMX19_03632 0.61 +0.0 1,068,263 - MPMX19_03632 0.61 -1.1 1,068,263 - MPMX19_03632 0.61 -0.8 1,068,263 - MPMX19_03632 0.61 +0.8 1,068,263 - MPMX19_03632 0.61 -1.7 1,068,263 - MPMX19_03632 0.61 -0.8 1,068,263 - MPMX19_03632 0.61 -0.3 1,068,263 - MPMX19_03632 0.61 -0.4 1,068,263 - MPMX19_03632 0.61 -1.8 1,068,308 - MPMX19_03632 0.64 -2.0 1,068,643 + MPMX19_03632 0.85 -0.6 1,068,644 - MPMX19_03632 0.85 -0.2 1,068,644 - MPMX19_03632 0.85 -1.8 1,068,644 - MPMX19_03632 0.85 -1.5 1,068,644 - MPMX19_03632 0.85 -2.2 1,068,881 - -0.5 1,068,932 - +0.2 1,069,209 + MPMX19_03633 0.12 +0.2 1,069,209 + MPMX19_03633 0.12 +0.8 1,069,209 + MPMX19_03633 0.12 +1.8 1,069,210 - MPMX19_03633 0.13 -1.0 1,069,210 - MPMX19_03633 0.13 -0.8 1,069,506 + MPMX19_03633 0.40 +0.9 1,069,506 + MPMX19_03633 0.40 +0.2 1,069,506 + MPMX19_03633 0.40 +0.3 1,069,506 + MPMX19_03633 0.40 +0.8 1,069,506 + MPMX19_03633 0.40 +1.8 1,069,506 + MPMX19_03633 0.40 +0.6 1,069,506 + MPMX19_03633 0.40 -1.0 1,069,507 - MPMX19_03633 0.40 -1.0 1,069,507 - MPMX19_03633 0.40 +0.4 1,069,507 - MPMX19_03633 0.40 -0.1 1,069,645 - MPMX19_03633 0.53 -1.3 1,069,645 - MPMX19_03633 0.53 +0.0 1,069,645 - MPMX19_03633 0.53 -1.6 1,069,830 + MPMX19_03633 0.71 -0.1 1,069,914 + MPMX19_03633 0.79 -0.8 1,069,914 + MPMX19_03633 0.79 -1.3 1,069,915 - MPMX19_03633 0.79 -0.2 1,069,926 + MPMX19_03633 0.80 -0.3 1,069,926 + MPMX19_03633 0.80 -0.0 1,069,927 - MPMX19_03633 0.80 -1.0 1,069,927 - MPMX19_03633 0.80 -0.8 1,070,038 - -0.2 1,070,038 - +0.8 1,070,038 - -1.4 1,070,179 + -0.3 1,070,180 - -0.5 1,070,614 + MPMX19_03634 0.48 +1.4 1,070,614 + MPMX19_03634 0.48 +0.9 1,070,615 - MPMX19_03634 0.48 +2.4 1,070,644 + MPMX19_03634 0.51 -0.8 1,070,644 + MPMX19_03634 0.51 -1.9 1,070,644 + MPMX19_03634 0.51 -0.6 1,070,644 + MPMX19_03634 0.51 +0.4 1,070,644 + MPMX19_03634 0.51 -1.5 1,070,645 - MPMX19_03634 0.51 -0.8 1,070,645 - MPMX19_03634 0.51 -1.2 1,070,645 - MPMX19_03634 0.51 -1.2 1,070,645 - MPMX19_03634 0.51 +0.6 1,070,645 - MPMX19_03634 0.51 +3.4 1,070,645 - MPMX19_03634 0.51 -0.2 1,070,645 - MPMX19_03634 0.51 +0.4 1,070,845 + MPMX19_03634 0.72 +0.0 1,070,846 - MPMX19_03634 0.72 -1.1 1,070,846 - MPMX19_03634 0.72 -0.3 1,071,104 - +0.0
Or see this region's nucleotide sequence