Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03374 and MPMX19_03375 overlap by 4 nucleotides MPMX19_03375 and MPMX19_03376 are separated by 136 nucleotides
MPMX19_03374: MPMX19_03374 - Alpha-hemolysin translocation ATP-binding protein HlyB, at 751,457 to 753,139
_03374
MPMX19_03375: MPMX19_03375 - Outer membrane protein TolC, at 753,136 to 754,560
_03375
MPMX19_03376: MPMX19_03376 - hypothetical protein, at 754,697 to 760,675
_03376
Position (kb) 753
754
755 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 752.154 kb on + strand, within MPMX19_03374 at 752.155 kb on - strand, within MPMX19_03374 at 752.155 kb on - strand, within MPMX19_03374 at 752.155 kb on - strand, within MPMX19_03374 at 752.997 kb on + strand at 753.021 kb on + strand at 753.021 kb on + strand at 753.021 kb on + strand at 753.021 kb on + strand at 753.021 kb on + strand at 753.021 kb on + strand at 753.021 kb on + strand at 753.021 kb on + strand at 753.021 kb on + strand at 753.021 kb on + strand at 753.021 kb on + strand at 753.021 kb on + strand at 753.022 kb on - strand at 753.022 kb on - strand at 753.022 kb on - strand at 753.022 kb on - strand at 753.022 kb on - strand at 753.022 kb on - strand at 753.022 kb on - strand at 753.022 kb on - strand at 753.713 kb on + strand, within MPMX19_03375 at 753.713 kb on + strand, within MPMX19_03375 at 753.714 kb on - strand, within MPMX19_03375 at 753.714 kb on - strand, within MPMX19_03375 at 753.714 kb on - strand, within MPMX19_03375 at 753.714 kb on - strand, within MPMX19_03375 at 753.732 kb on - strand, within MPMX19_03375 at 753.917 kb on + strand, within MPMX19_03375 at 753.917 kb on + strand, within MPMX19_03375 at 753.917 kb on + strand, within MPMX19_03375 at 753.917 kb on + strand, within MPMX19_03375 at 753.918 kb on - strand, within MPMX19_03375 at 753.918 kb on - strand, within MPMX19_03375 at 753.918 kb on - strand, within MPMX19_03375 at 754.018 kb on - strand, within MPMX19_03375 at 754.028 kb on + strand, within MPMX19_03375 at 754.133 kb on + strand, within MPMX19_03375 at 754.134 kb on - strand, within MPMX19_03375 at 754.134 kb on - strand, within MPMX19_03375 at 754.365 kb on - strand, within MPMX19_03375 at 754.554 kb on + strand at 754.554 kb on + strand at 754.555 kb on - strand at 754.555 kb on - strand at 754.555 kb on - strand at 754.555 kb on - strand at 754.555 kb on - strand at 754.555 kb on - strand at 754.595 kb on - strand at 754.595 kb on - strand at 754.595 kb on - strand at 754.620 kb on - strand at 754.620 kb on - strand at 754.633 kb on + strand at 754.633 kb on + strand at 754.634 kb on - strand at 754.634 kb on - strand at 754.634 kb on - strand at 754.635 kb on + strand at 754.635 kb on + strand at 754.635 kb on + strand at 754.636 kb on - strand at 754.636 kb on - strand at 754.636 kb on - strand at 754.636 kb on - strand at 754.643 kb on + strand at 754.669 kb on - strand at 754.671 kb on + strand at 754.671 kb on + strand at 754.698 kb on + strand at 754.712 kb on - strand at 754.729 kb on + strand at 754.729 kb on + strand at 754.817 kb on + strand at 754.817 kb on + strand at 754.817 kb on + strand at 754.817 kb on + strand at 754.817 kb on + strand at 754.818 kb on - strand at 754.820 kb on - strand at 754.820 kb on - strand at 754.820 kb on - strand at 754.820 kb on - strand at 754.820 kb on - strand at 755.092 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 752,154 + MPMX19_03374 0.41 +0.0 752,155 - MPMX19_03374 0.41 -1.7 752,155 - MPMX19_03374 0.41 -0.5 752,155 - MPMX19_03374 0.41 -1.3 752,997 + +0.2 753,021 + -1.9 753,021 + -0.1 753,021 + +0.5 753,021 + -0.3 753,021 + -0.5 753,021 + -0.8 753,021 + +1.0 753,021 + +0.5 753,021 + -2.8 753,021 + +0.3 753,021 + -0.9 753,021 + -0.7 753,022 - -0.8 753,022 - -2.1 753,022 - -0.7 753,022 - -0.6 753,022 - -0.5 753,022 - -1.0 753,022 - -0.7 753,022 - -0.8 753,713 + MPMX19_03375 0.40 -0.3 753,713 + MPMX19_03375 0.40 +0.0 753,714 - MPMX19_03375 0.41 +0.1 753,714 - MPMX19_03375 0.41 -0.6 753,714 - MPMX19_03375 0.41 -0.1 753,714 - MPMX19_03375 0.41 +0.3 753,732 - MPMX19_03375 0.42 +0.7 753,917 + MPMX19_03375 0.55 -0.1 753,917 + MPMX19_03375 0.55 +1.1 753,917 + MPMX19_03375 0.55 +0.6 753,917 + MPMX19_03375 0.55 -2.0 753,918 - MPMX19_03375 0.55 -0.6 753,918 - MPMX19_03375 0.55 +0.7 753,918 - MPMX19_03375 0.55 -1.1 754,018 - MPMX19_03375 0.62 -0.2 754,028 + MPMX19_03375 0.63 +0.2 754,133 + MPMX19_03375 0.70 +0.5 754,134 - MPMX19_03375 0.70 +1.3 754,134 - MPMX19_03375 0.70 -0.2 754,365 - MPMX19_03375 0.86 -1.2 754,554 + -0.6 754,554 + -0.1 754,555 - -0.8 754,555 - +1.0 754,555 - +1.3 754,555 - -0.3 754,555 - +0.0 754,555 - -1.6 754,595 - +0.1 754,595 - +0.7 754,595 - +0.5 754,620 - +0.7 754,620 - +1.3 754,633 + -0.3 754,633 + -0.7 754,634 - +0.7 754,634 - +0.0 754,634 - +0.9 754,635 + -2.3 754,635 + -0.1 754,635 + -0.0 754,636 - -0.8 754,636 - -0.3 754,636 - -0.7 754,636 - +0.3 754,643 + -1.1 754,669 - -1.1 754,671 + -0.5 754,671 + +2.0 754,698 + +0.2 754,712 - +1.0 754,729 + +0.7 754,729 + -0.8 754,817 + -0.2 754,817 + -0.3 754,817 + +0.2 754,817 + -0.0 754,817 + -0.8 754,818 - -1.3 754,820 - -1.5 754,820 - -2.2 754,820 - +0.7 754,820 - +0.1 754,820 - -0.8 755,092 + +0.0
Or see this region's nucleotide sequence