Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03160 and MPMX19_03161 are separated by 114 nucleotides MPMX19_03161 and MPMX19_03162 are separated by 86 nucleotides MPMX19_03162 and MPMX19_03163 are separated by 93 nucleotides MPMX19_03163 and MPMX19_03164 are separated by 7 nucleotides
MPMX19_03160: MPMX19_03160 - Arsenate reductase, at 452,817 to 453,347
_03160
MPMX19_03161: MPMX19_03161 - Quercetin 2,3-dioxygenase, at 453,462 to 454,160
_03161
MPMX19_03162: MPMX19_03162 - Sensor histidine kinase RcsC, at 454,247 to 455,728
_03162
MPMX19_03163: MPMX19_03163 - hypothetical protein, at 455,822 to 456,502
_03163
MPMX19_03164: MPMX19_03164 - hypothetical protein, at 456,510 to 456,827
_03164
Position (kb) 454
455
456 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 453.328 kb on + strand at 453.328 kb on + strand at 453.328 kb on + strand at 453.329 kb on - strand at 453.444 kb on + strand at 453.444 kb on + strand at 453.444 kb on + strand at 453.444 kb on + strand at 453.445 kb on - strand at 453.445 kb on - strand at 453.445 kb on - strand at 453.445 kb on - strand at 453.445 kb on - strand at 453.445 kb on - strand at 453.445 kb on - strand at 453.463 kb on + strand at 453.463 kb on + strand at 453.463 kb on + strand at 453.463 kb on + strand at 453.463 kb on + strand at 453.463 kb on + strand at 453.464 kb on - strand at 453.464 kb on - strand at 453.464 kb on - strand at 453.464 kb on - strand at 453.464 kb on - strand at 453.464 kb on - strand at 453.464 kb on - strand at 453.664 kb on + strand, within MPMX19_03161 at 453.664 kb on + strand, within MPMX19_03161 at 453.664 kb on + strand, within MPMX19_03161 at 453.665 kb on - strand, within MPMX19_03161 at 453.665 kb on - strand, within MPMX19_03161 at 453.665 kb on - strand, within MPMX19_03161 at 453.665 kb on - strand, within MPMX19_03161 at 453.772 kb on + strand, within MPMX19_03161 at 453.850 kb on + strand, within MPMX19_03161 at 453.850 kb on + strand, within MPMX19_03161 at 453.850 kb on + strand, within MPMX19_03161 at 453.850 kb on + strand, within MPMX19_03161 at 453.850 kb on + strand, within MPMX19_03161 at 453.851 kb on - strand, within MPMX19_03161 at 453.851 kb on - strand, within MPMX19_03161 at 453.851 kb on - strand, within MPMX19_03161 at 453.851 kb on - strand, within MPMX19_03161 at 453.851 kb on - strand, within MPMX19_03161 at 453.851 kb on - strand, within MPMX19_03161 at 453.851 kb on - strand, within MPMX19_03161 at 453.961 kb on + strand, within MPMX19_03161 at 453.961 kb on + strand, within MPMX19_03161 at 453.961 kb on + strand, within MPMX19_03161 at 453.961 kb on + strand, within MPMX19_03161 at 453.961 kb on + strand, within MPMX19_03161 at 453.961 kb on + strand, within MPMX19_03161 at 453.962 kb on - strand, within MPMX19_03161 at 453.962 kb on - strand, within MPMX19_03161 at 453.962 kb on - strand, within MPMX19_03161 at 453.962 kb on - strand, within MPMX19_03161 at 453.962 kb on - strand, within MPMX19_03161 at 453.962 kb on - strand, within MPMX19_03161 at 453.962 kb on - strand, within MPMX19_03161 at 453.962 kb on - strand, within MPMX19_03161 at 453.962 kb on - strand, within MPMX19_03161 at 454.058 kb on + strand, within MPMX19_03161 at 454.058 kb on + strand, within MPMX19_03161 at 454.058 kb on + strand, within MPMX19_03161 at 454.075 kb on + strand, within MPMX19_03161 at 454.075 kb on + strand, within MPMX19_03161 at 454.075 kb on + strand, within MPMX19_03161 at 454.075 kb on + strand, within MPMX19_03161 at 454.075 kb on + strand, within MPMX19_03161 at 454.076 kb on - strand, within MPMX19_03161 at 454.076 kb on - strand, within MPMX19_03161 at 454.076 kb on - strand, within MPMX19_03161 at 454.076 kb on - strand, within MPMX19_03161 at 454.248 kb on + strand at 454.494 kb on + strand, within MPMX19_03162 at 454.494 kb on + strand, within MPMX19_03162 at 454.494 kb on + strand, within MPMX19_03162 at 454.495 kb on - strand, within MPMX19_03162 at 454.495 kb on - strand, within MPMX19_03162 at 454.495 kb on - strand, within MPMX19_03162 at 454.495 kb on - strand, within MPMX19_03162 at 454.558 kb on + strand, within MPMX19_03162 at 454.558 kb on + strand, within MPMX19_03162 at 454.558 kb on + strand, within MPMX19_03162 at 454.558 kb on + strand, within MPMX19_03162 at 454.559 kb on - strand, within MPMX19_03162 at 454.560 kb on + strand, within MPMX19_03162 at 454.560 kb on + strand, within MPMX19_03162 at 454.560 kb on + strand, within MPMX19_03162 at 454.561 kb on - strand, within MPMX19_03162 at 454.561 kb on - strand, within MPMX19_03162 at 455.202 kb on + strand, within MPMX19_03162 at 455.202 kb on + strand, within MPMX19_03162 at 455.202 kb on + strand, within MPMX19_03162 at 455.202 kb on + strand, within MPMX19_03162 at 455.203 kb on - strand, within MPMX19_03162 at 455.203 kb on - strand, within MPMX19_03162 at 455.332 kb on + strand, within MPMX19_03162 at 455.332 kb on + strand, within MPMX19_03162 at 455.332 kb on + strand, within MPMX19_03162 at 455.332 kb on + strand, within MPMX19_03162 at 455.333 kb on - strand, within MPMX19_03162 at 455.373 kb on + strand, within MPMX19_03162 at 455.373 kb on + strand, within MPMX19_03162 at 455.373 kb on + strand, within MPMX19_03162 at 455.374 kb on - strand, within MPMX19_03162 at 455.374 kb on - strand, within MPMX19_03162 at 455.374 kb on - strand, within MPMX19_03162 at 455.374 kb on - strand, within MPMX19_03162 at 455.374 kb on - strand, within MPMX19_03162 at 455.823 kb on + strand at 455.823 kb on + strand at 455.823 kb on + strand at 455.823 kb on + strand at 455.823 kb on + strand at 455.823 kb on + strand at 455.824 kb on - strand at 455.824 kb on - strand at 455.824 kb on - strand at 455.864 kb on + strand at 455.864 kb on + strand at 455.864 kb on + strand at 455.864 kb on + strand at 455.864 kb on + strand at 455.864 kb on + strand at 455.864 kb on + strand at 455.864 kb on + strand at 455.864 kb on + strand at 455.865 kb on - strand at 455.865 kb on - strand at 455.865 kb on - strand at 455.865 kb on - strand at 455.865 kb on - strand at 455.865 kb on - strand at 455.865 kb on - strand at 455.914 kb on - strand, within MPMX19_03163 at 455.973 kb on + strand, within MPMX19_03163 at 455.974 kb on - strand, within MPMX19_03163 at 455.974 kb on - strand, within MPMX19_03163 at 455.974 kb on - strand, within MPMX19_03163 at 456.096 kb on + strand, within MPMX19_03163 at 456.096 kb on + strand, within MPMX19_03163 at 456.097 kb on - strand, within MPMX19_03163 at 456.097 kb on - strand, within MPMX19_03163 at 456.097 kb on - strand, within MPMX19_03163 at 456.097 kb on - strand, within MPMX19_03163 at 456.097 kb on - strand, within MPMX19_03163 at 456.097 kb on - strand, within MPMX19_03163 at 456.097 kb on - strand, within MPMX19_03163 at 456.097 kb on - strand, within MPMX19_03163 at 456.228 kb on + strand, within MPMX19_03163 at 456.228 kb on + strand, within MPMX19_03163 at 456.228 kb on + strand, within MPMX19_03163 at 456.228 kb on + strand, within MPMX19_03163 at 456.228 kb on + strand, within MPMX19_03163 at 456.228 kb on + strand, within MPMX19_03163 at 456.228 kb on + strand, within MPMX19_03163 at 456.228 kb on + strand, within MPMX19_03163 at 456.228 kb on + strand, within MPMX19_03163 at 456.228 kb on + strand, within MPMX19_03163 at 456.229 kb on - strand, within MPMX19_03163 at 456.229 kb on - strand, within MPMX19_03163 at 456.229 kb on - strand, within MPMX19_03163 at 456.229 kb on - strand, within MPMX19_03163 at 456.229 kb on - strand, within MPMX19_03163 at 456.229 kb on - strand, within MPMX19_03163 at 456.229 kb on - strand, within MPMX19_03163 at 456.229 kb on - strand, within MPMX19_03163 at 456.229 kb on - strand, within MPMX19_03163 at 456.229 kb on - strand, within MPMX19_03163 at 456.235 kb on + strand, within MPMX19_03163 at 456.235 kb on + strand, within MPMX19_03163 at 456.236 kb on - strand, within MPMX19_03163 at 456.236 kb on - strand, within MPMX19_03163 at 456.236 kb on - strand, within MPMX19_03163 at 456.468 kb on + strand at 456.507 kb on + strand at 456.507 kb on + strand at 456.507 kb on + strand at 456.507 kb on + strand at 456.507 kb on + strand at 456.507 kb on + strand at 456.507 kb on + strand at 456.508 kb on - strand at 456.508 kb on - strand at 456.508 kb on - strand at 456.508 kb on - strand at 456.607 kb on - strand, within MPMX19_03164 at 456.607 kb on - strand, within MPMX19_03164 at 456.723 kb on + strand, within MPMX19_03164 at 456.723 kb on + strand, within MPMX19_03164 at 456.723 kb on + strand, within MPMX19_03164 at 456.723 kb on + strand, within MPMX19_03164 at 456.723 kb on + strand, within MPMX19_03164 at 456.723 kb on + strand, within MPMX19_03164 at 456.723 kb on + strand, within MPMX19_03164 at 456.723 kb on + strand, within MPMX19_03164 at 456.723 kb on + strand, within MPMX19_03164 at 456.723 kb on + strand, within MPMX19_03164 at 456.723 kb on + strand, within MPMX19_03164 at 456.723 kb on + strand, within MPMX19_03164 at 456.724 kb on - strand, within MPMX19_03164 at 456.724 kb on - strand, within MPMX19_03164 at 456.724 kb on - strand, within MPMX19_03164 at 456.724 kb on - strand, within MPMX19_03164 at 456.724 kb on - strand, within MPMX19_03164 at 456.724 kb on - strand, within MPMX19_03164
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 453,328 + -1.7 453,328 + -1.8 453,328 + -1.3 453,329 - -0.4 453,444 + -1.1 453,444 + -1.4 453,444 + -0.9 453,444 + -0.4 453,445 - +0.4 453,445 - -0.7 453,445 - -1.7 453,445 - -0.9 453,445 - -1.3 453,445 - -1.1 453,445 - -1.6 453,463 + -1.6 453,463 + -1.2 453,463 + -0.9 453,463 + +0.8 453,463 + -1.1 453,463 + -1.2 453,464 - +0.4 453,464 - -1.5 453,464 - +1.4 453,464 - -2.1 453,464 - -0.6 453,464 - -0.8 453,464 - -1.3 453,664 + MPMX19_03161 0.29 -0.3 453,664 + MPMX19_03161 0.29 +0.6 453,664 + MPMX19_03161 0.29 -1.2 453,665 - MPMX19_03161 0.29 -0.8 453,665 - MPMX19_03161 0.29 -1.0 453,665 - MPMX19_03161 0.29 -0.1 453,665 - MPMX19_03161 0.29 -0.5 453,772 + MPMX19_03161 0.44 -0.2 453,850 + MPMX19_03161 0.56 +0.2 453,850 + MPMX19_03161 0.56 +0.9 453,850 + MPMX19_03161 0.56 +0.1 453,850 + MPMX19_03161 0.56 -2.3 453,850 + MPMX19_03161 0.56 +0.4 453,851 - MPMX19_03161 0.56 +0.4 453,851 - MPMX19_03161 0.56 -0.6 453,851 - MPMX19_03161 0.56 -0.7 453,851 - MPMX19_03161 0.56 -1.3 453,851 - MPMX19_03161 0.56 -0.8 453,851 - MPMX19_03161 0.56 -2.0 453,851 - MPMX19_03161 0.56 -1.2 453,961 + MPMX19_03161 0.71 -0.2 453,961 + MPMX19_03161 0.71 +1.4 453,961 + MPMX19_03161 0.71 -0.2 453,961 + MPMX19_03161 0.71 -0.2 453,961 + MPMX19_03161 0.71 -1.0 453,961 + MPMX19_03161 0.71 -0.1 453,962 - MPMX19_03161 0.72 -0.2 453,962 - MPMX19_03161 0.72 -0.1 453,962 - MPMX19_03161 0.72 -0.0 453,962 - MPMX19_03161 0.72 +0.1 453,962 - MPMX19_03161 0.72 -1.7 453,962 - MPMX19_03161 0.72 -0.7 453,962 - MPMX19_03161 0.72 +1.6 453,962 - MPMX19_03161 0.72 -1.8 453,962 - MPMX19_03161 0.72 -0.4 454,058 + MPMX19_03161 0.85 -2.1 454,058 + MPMX19_03161 0.85 +0.3 454,058 + MPMX19_03161 0.85 -1.5 454,075 + MPMX19_03161 0.88 -1.6 454,075 + MPMX19_03161 0.88 +0.4 454,075 + MPMX19_03161 0.88 +0.5 454,075 + MPMX19_03161 0.88 -0.2 454,075 + MPMX19_03161 0.88 -0.0 454,076 - MPMX19_03161 0.88 -0.6 454,076 - MPMX19_03161 0.88 +0.6 454,076 - MPMX19_03161 0.88 -0.2 454,076 - MPMX19_03161 0.88 -0.4 454,248 + +0.6 454,494 + MPMX19_03162 0.17 -0.3 454,494 + MPMX19_03162 0.17 -0.8 454,494 + MPMX19_03162 0.17 -2.3 454,495 - MPMX19_03162 0.17 +0.2 454,495 - MPMX19_03162 0.17 +1.1 454,495 - MPMX19_03162 0.17 -0.2 454,495 - MPMX19_03162 0.17 -1.4 454,558 + MPMX19_03162 0.21 -0.3 454,558 + MPMX19_03162 0.21 -0.4 454,558 + MPMX19_03162 0.21 -0.8 454,558 + MPMX19_03162 0.21 +1.8 454,559 - MPMX19_03162 0.21 -0.4 454,560 + MPMX19_03162 0.21 -1.5 454,560 + MPMX19_03162 0.21 -1.2 454,560 + MPMX19_03162 0.21 +0.2 454,561 - MPMX19_03162 0.21 +1.4 454,561 - MPMX19_03162 0.21 +2.4 455,202 + MPMX19_03162 0.64 +3.4 455,202 + MPMX19_03162 0.64 +0.2 455,202 + MPMX19_03162 0.64 -1.6 455,202 + MPMX19_03162 0.64 -1.3 455,203 - MPMX19_03162 0.65 -0.7 455,203 - MPMX19_03162 0.65 +0.6 455,332 + MPMX19_03162 0.73 +0.8 455,332 + MPMX19_03162 0.73 -0.6 455,332 + MPMX19_03162 0.73 +0.6 455,332 + MPMX19_03162 0.73 +1.8 455,333 - MPMX19_03162 0.73 -1.1 455,373 + MPMX19_03162 0.76 +0.3 455,373 + MPMX19_03162 0.76 -0.1 455,373 + MPMX19_03162 0.76 +0.5 455,374 - MPMX19_03162 0.76 +0.6 455,374 - MPMX19_03162 0.76 +0.4 455,374 - MPMX19_03162 0.76 -2.1 455,374 - MPMX19_03162 0.76 +0.1 455,374 - MPMX19_03162 0.76 -0.9 455,823 + -1.3 455,823 + +0.4 455,823 + +0.8 455,823 + -0.6 455,823 + +1.4 455,823 + -0.5 455,824 - -0.3 455,824 - -0.5 455,824 - +0.4 455,864 + +0.1 455,864 + -0.2 455,864 + -1.8 455,864 + -0.7 455,864 + +0.3 455,864 + -1.1 455,864 + +0.2 455,864 + -0.3 455,864 + -0.2 455,865 - -1.3 455,865 - -1.3 455,865 - +0.1 455,865 - -0.6 455,865 - -1.6 455,865 - -0.1 455,865 - +0.4 455,914 - MPMX19_03163 0.14 -0.4 455,973 + MPMX19_03163 0.22 -0.6 455,974 - MPMX19_03163 0.22 -0.9 455,974 - MPMX19_03163 0.22 -0.4 455,974 - MPMX19_03163 0.22 -0.6 456,096 + MPMX19_03163 0.40 -1.5 456,096 + MPMX19_03163 0.40 -0.6 456,097 - MPMX19_03163 0.40 -1.6 456,097 - MPMX19_03163 0.40 -0.3 456,097 - MPMX19_03163 0.40 -1.4 456,097 - MPMX19_03163 0.40 -0.9 456,097 - MPMX19_03163 0.40 -0.0 456,097 - MPMX19_03163 0.40 -0.9 456,097 - MPMX19_03163 0.40 -2.3 456,097 - MPMX19_03163 0.40 +0.6 456,228 + MPMX19_03163 0.60 -0.2 456,228 + MPMX19_03163 0.60 -0.4 456,228 + MPMX19_03163 0.60 -0.2 456,228 + MPMX19_03163 0.60 +1.8 456,228 + MPMX19_03163 0.60 -1.6 456,228 + MPMX19_03163 0.60 +1.2 456,228 + MPMX19_03163 0.60 +1.4 456,228 + MPMX19_03163 0.60 -0.2 456,228 + MPMX19_03163 0.60 -1.5 456,228 + MPMX19_03163 0.60 -0.4 456,229 - MPMX19_03163 0.60 +0.8 456,229 - MPMX19_03163 0.60 -1.1 456,229 - MPMX19_03163 0.60 -1.3 456,229 - MPMX19_03163 0.60 +0.1 456,229 - MPMX19_03163 0.60 -0.7 456,229 - MPMX19_03163 0.60 +0.1 456,229 - MPMX19_03163 0.60 +0.2 456,229 - MPMX19_03163 0.60 -0.9 456,229 - MPMX19_03163 0.60 -1.4 456,229 - MPMX19_03163 0.60 -1.7 456,235 + MPMX19_03163 0.61 -0.6 456,235 + MPMX19_03163 0.61 +0.6 456,236 - MPMX19_03163 0.61 -0.7 456,236 - MPMX19_03163 0.61 -1.0 456,236 - MPMX19_03163 0.61 +2.4 456,468 + -0.4 456,507 + +1.4 456,507 + -2.7 456,507 + -0.5 456,507 + +0.8 456,507 + +0.1 456,507 + -0.6 456,507 + -0.6 456,508 - +0.4 456,508 - -1.1 456,508 - -0.8 456,508 - +0.2 456,607 - MPMX19_03164 0.31 -1.7 456,607 - MPMX19_03164 0.31 +0.1 456,723 + MPMX19_03164 0.67 -0.1 456,723 + MPMX19_03164 0.67 -1.5 456,723 + MPMX19_03164 0.67 -0.6 456,723 + MPMX19_03164 0.67 -1.3 456,723 + MPMX19_03164 0.67 -0.8 456,723 + MPMX19_03164 0.67 +0.5 456,723 + MPMX19_03164 0.67 -2.0 456,723 + MPMX19_03164 0.67 -1.6 456,723 + MPMX19_03164 0.67 -0.6 456,723 + MPMX19_03164 0.67 -1.2 456,723 + MPMX19_03164 0.67 +1.2 456,723 + MPMX19_03164 0.67 -0.2 456,724 - MPMX19_03164 0.67 +0.8 456,724 - MPMX19_03164 0.67 -0.2 456,724 - MPMX19_03164 0.67 -2.1 456,724 - MPMX19_03164 0.67 -1.7 456,724 - MPMX19_03164 0.67 -1.7 456,724 - MPMX19_03164 0.67 -0.6
Or see this region's nucleotide sequence