Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03066 and MPMX19_03067 are separated by 192 nucleotides MPMX19_03067 and MPMX19_03068 overlap by 4 nucleotides MPMX19_03068 and MPMX19_03069 are separated by 2 nucleotides
MPMX19_03066: MPMX19_03066 - hypothetical protein, at 330,837 to 331,850
_03066
MPMX19_03067: MPMX19_03067 - hypothetical protein, at 332,043 to 333,314
_03067
MPMX19_03068: MPMX19_03068 - hypothetical protein, at 333,311 to 334,153
_03068
MPMX19_03069: MPMX19_03069 - hypothetical protein, at 334,156 to 334,749
_03069
Position (kb) 332
333
334 Strain fitness (log2 ratio) -2
-1
0
1 at 331.924 kb on - strand at 332.004 kb on - strand at 332.372 kb on + strand, within MPMX19_03067 at 332.466 kb on + strand, within MPMX19_03067 at 332.466 kb on + strand, within MPMX19_03067 at 332.466 kb on + strand, within MPMX19_03067 at 332.467 kb on - strand, within MPMX19_03067 at 333.018 kb on + strand, within MPMX19_03067 at 333.018 kb on + strand, within MPMX19_03067 at 333.018 kb on + strand, within MPMX19_03067 at 333.018 kb on + strand, within MPMX19_03067 at 333.018 kb on + strand, within MPMX19_03067 at 333.018 kb on + strand, within MPMX19_03067 at 333.019 kb on - strand, within MPMX19_03067 at 333.019 kb on - strand, within MPMX19_03067 at 333.019 kb on - strand, within MPMX19_03067 at 333.019 kb on - strand, within MPMX19_03067 at 333.019 kb on - strand, within MPMX19_03067 at 333.019 kb on - strand, within MPMX19_03067 at 333.019 kb on - strand, within MPMX19_03067 at 333.316 kb on - strand at 333.316 kb on - strand at 333.316 kb on - strand at 333.419 kb on + strand, within MPMX19_03068 at 333.419 kb on + strand, within MPMX19_03068 at 333.420 kb on - strand, within MPMX19_03068 at 333.420 kb on - strand, within MPMX19_03068 at 333.467 kb on + strand, within MPMX19_03068 at 333.467 kb on + strand, within MPMX19_03068 at 333.467 kb on + strand, within MPMX19_03068 at 333.468 kb on - strand, within MPMX19_03068 at 333.761 kb on + strand, within MPMX19_03068 at 333.761 kb on + strand, within MPMX19_03068 at 333.761 kb on + strand, within MPMX19_03068 at 333.761 kb on + strand, within MPMX19_03068 at 333.761 kb on + strand, within MPMX19_03068 at 333.761 kb on + strand, within MPMX19_03068 at 333.761 kb on + strand, within MPMX19_03068 at 333.762 kb on - strand, within MPMX19_03068 at 333.762 kb on - strand, within MPMX19_03068 at 333.762 kb on - strand, within MPMX19_03068 at 333.929 kb on + strand, within MPMX19_03068 at 333.929 kb on + strand, within MPMX19_03068 at 333.929 kb on + strand, within MPMX19_03068 at 333.930 kb on - strand, within MPMX19_03068 at 333.998 kb on + strand, within MPMX19_03068 at 333.998 kb on + strand, within MPMX19_03068 at 333.999 kb on - strand, within MPMX19_03068 at 334.016 kb on + strand, within MPMX19_03068 at 334.017 kb on - strand, within MPMX19_03068 at 334.017 kb on - strand, within MPMX19_03068 at 334.017 kb on - strand, within MPMX19_03068 at 334.249 kb on + strand, within MPMX19_03069 at 334.249 kb on + strand, within MPMX19_03069 at 334.249 kb on + strand, within MPMX19_03069 at 334.249 kb on + strand, within MPMX19_03069 at 334.250 kb on - strand, within MPMX19_03069
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 331,924 - +0.4 332,004 - -0.7 332,372 + MPMX19_03067 0.26 -0.2 332,466 + MPMX19_03067 0.33 +0.4 332,466 + MPMX19_03067 0.33 -1.4 332,466 + MPMX19_03067 0.33 -1.3 332,467 - MPMX19_03067 0.33 +0.8 333,018 + MPMX19_03067 0.77 -1.4 333,018 + MPMX19_03067 0.77 -1.1 333,018 + MPMX19_03067 0.77 -2.4 333,018 + MPMX19_03067 0.77 +1.1 333,018 + MPMX19_03067 0.77 +0.1 333,018 + MPMX19_03067 0.77 -1.1 333,019 - MPMX19_03067 0.77 +0.1 333,019 - MPMX19_03067 0.77 -1.0 333,019 - MPMX19_03067 0.77 -2.6 333,019 - MPMX19_03067 0.77 -0.9 333,019 - MPMX19_03067 0.77 -1.9 333,019 - MPMX19_03067 0.77 -1.1 333,019 - MPMX19_03067 0.77 -1.4 333,316 - +1.4 333,316 - +0.3 333,316 - -0.4 333,419 + MPMX19_03068 0.13 -0.3 333,419 + MPMX19_03068 0.13 +1.2 333,420 - MPMX19_03068 0.13 -1.8 333,420 - MPMX19_03068 0.13 -0.6 333,467 + MPMX19_03068 0.19 +0.6 333,467 + MPMX19_03068 0.19 -0.8 333,467 + MPMX19_03068 0.19 +0.8 333,468 - MPMX19_03068 0.19 +0.2 333,761 + MPMX19_03068 0.53 +0.2 333,761 + MPMX19_03068 0.53 -1.9 333,761 + MPMX19_03068 0.53 +0.8 333,761 + MPMX19_03068 0.53 +1.0 333,761 + MPMX19_03068 0.53 -1.3 333,761 + MPMX19_03068 0.53 -1.1 333,761 + MPMX19_03068 0.53 -0.1 333,762 - MPMX19_03068 0.53 +0.1 333,762 - MPMX19_03068 0.53 -0.9 333,762 - MPMX19_03068 0.53 -1.3 333,929 + MPMX19_03068 0.73 +0.2 333,929 + MPMX19_03068 0.73 -1.7 333,929 + MPMX19_03068 0.73 -0.6 333,930 - MPMX19_03068 0.73 +0.6 333,998 + MPMX19_03068 0.81 -2.4 333,998 + MPMX19_03068 0.81 -0.7 333,999 - MPMX19_03068 0.82 +0.1 334,016 + MPMX19_03068 0.84 -0.8 334,017 - MPMX19_03068 0.84 +0.8 334,017 - MPMX19_03068 0.84 +0.8 334,017 - MPMX19_03068 0.84 -1.0 334,249 + MPMX19_03069 0.16 -0.9 334,249 + MPMX19_03069 0.16 -0.6 334,249 + MPMX19_03069 0.16 -2.1 334,249 + MPMX19_03069 0.16 -0.4 334,250 - MPMX19_03069 0.16 -0.5
Or see this region's nucleotide sequence