Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01167

Experiment: MGL

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX19_01166 and MPMX19_01167 are separated by 217 nucleotidesMPMX19_01167 and MPMX19_01168 are separated by 915 nucleotides MPMX19_01166: MPMX19_01166 - hypothetical protein, at 1,204,670 to 1,205,563 _01166 MPMX19_01167: MPMX19_01167 - tRNA-Asp, at 1,205,781 to 1,205,875 _01167 MPMX19_01168: MPMX19_01168 - Protein-L-isoaspartate O-methyltransferase, at 1,206,791 to 1,207,444 _01168 Position (kb) 1205 1206Strain fitness (log2 ratio) -2 -1 0 1 2at 1205.174 kb on + strand, within MPMX19_01166at 1205.174 kb on + strand, within MPMX19_01166at 1205.174 kb on + strand, within MPMX19_01166at 1205.174 kb on + strand, within MPMX19_01166at 1205.174 kb on + strand, within MPMX19_01166at 1205.174 kb on + strand, within MPMX19_01166at 1205.174 kb on + strand, within MPMX19_01166at 1205.174 kb on + strand, within MPMX19_01166at 1205.174 kb on + strand, within MPMX19_01166at 1205.174 kb on + strand, within MPMX19_01166at 1205.174 kb on + strand, within MPMX19_01166at 1205.174 kb on + strand, within MPMX19_01166at 1205.174 kb on + strand, within MPMX19_01166at 1205.174 kb on + strand, within MPMX19_01166at 1205.174 kb on + strand, within MPMX19_01166at 1205.174 kb on + strand, within MPMX19_01166at 1205.174 kb on + strand, within MPMX19_01166at 1205.175 kb on - strand, within MPMX19_01166at 1205.175 kb on - strand, within MPMX19_01166at 1205.175 kb on - strand, within MPMX19_01166at 1205.175 kb on - strand, within MPMX19_01166at 1205.175 kb on - strand, within MPMX19_01166at 1205.175 kb on - strand, within MPMX19_01166at 1205.175 kb on - strand, within MPMX19_01166at 1205.175 kb on - strand, within MPMX19_01166at 1205.175 kb on - strand, within MPMX19_01166at 1205.175 kb on - strand, within MPMX19_01166at 1205.175 kb on - strand, within MPMX19_01166at 1205.175 kb on - strand, within MPMX19_01166at 1205.175 kb on - strand, within MPMX19_01166at 1205.175 kb on - strand, within MPMX19_01166at 1205.175 kb on - strand, within MPMX19_01166at 1205.175 kb on - strand, within MPMX19_01166at 1205.237 kb on + strand, within MPMX19_01166at 1205.237 kb on + strand, within MPMX19_01166at 1205.237 kb on + strand, within MPMX19_01166at 1205.237 kb on + strand, within MPMX19_01166at 1205.237 kb on + strand, within MPMX19_01166at 1205.237 kb on + strand, within MPMX19_01166at 1205.237 kb on + strand, within MPMX19_01166at 1205.238 kb on - strand, within MPMX19_01166at 1205.238 kb on - strand, within MPMX19_01166at 1205.238 kb on - strand, within MPMX19_01166at 1205.238 kb on - strand, within MPMX19_01166at 1205.238 kb on - strand, within MPMX19_01166at 1205.238 kb on - strand, within MPMX19_01166at 1205.393 kb on + strand, within MPMX19_01166at 1205.393 kb on + strand, within MPMX19_01166at 1205.393 kb on + strand, within MPMX19_01166at 1205.393 kb on + strand, within MPMX19_01166at 1205.393 kb on + strand, within MPMX19_01166at 1205.393 kb on + strand, within MPMX19_01166at 1205.393 kb on + strand, within MPMX19_01166at 1205.393 kb on + strand, within MPMX19_01166at 1205.393 kb on + strand, within MPMX19_01166at 1205.393 kb on + strand, within MPMX19_01166at 1205.393 kb on + strand, within MPMX19_01166at 1205.393 kb on + strand, within MPMX19_01166at 1205.393 kb on + strand, within MPMX19_01166at 1205.393 kb on + strand, within MPMX19_01166at 1205.393 kb on + strand, within MPMX19_01166at 1205.393 kb on + strand, within MPMX19_01166at 1205.393 kb on + strand, within MPMX19_01166at 1205.393 kb on + strand, within MPMX19_01166at 1205.394 kb on - strand, within MPMX19_01166at 1205.394 kb on - strand, within MPMX19_01166at 1205.394 kb on - strand, within MPMX19_01166at 1205.394 kb on - strand, within MPMX19_01166at 1205.394 kb on - strand, within MPMX19_01166at 1205.394 kb on - strand, within MPMX19_01166at 1205.394 kb on - strand, within MPMX19_01166at 1205.394 kb on - strand, within MPMX19_01166at 1205.394 kb on - strand, within MPMX19_01166at 1205.394 kb on - strand, within MPMX19_01166at 1205.394 kb on - strand, within MPMX19_01166at 1205.394 kb on - strand, within MPMX19_01166at 1205.394 kb on - strand, within MPMX19_01166at 1205.394 kb on - strand, within MPMX19_01166at 1205.394 kb on - strand, within MPMX19_01166at 1205.394 kb on - strand, within MPMX19_01166at 1205.394 kb on - strand, within MPMX19_01166at 1205.394 kb on - strand, within MPMX19_01166at 1205.414 kb on + strand, within MPMX19_01166at 1205.414 kb on + strand, within MPMX19_01166at 1205.414 kb on + strand, within MPMX19_01166at 1205.414 kb on + strand, within MPMX19_01166at 1205.414 kb on + strand, within MPMX19_01166at 1205.414 kb on + strand, within MPMX19_01166at 1205.414 kb on + strand, within MPMX19_01166at 1205.414 kb on + strand, within MPMX19_01166at 1205.414 kb on + strand, within MPMX19_01166at 1205.414 kb on + strand, within MPMX19_01166at 1205.414 kb on + strand, within MPMX19_01166at 1205.414 kb on + strand, within MPMX19_01166at 1205.414 kb on + strand, within MPMX19_01166at 1205.414 kb on + strand, within MPMX19_01166at 1205.415 kb on - strand, within MPMX19_01166at 1205.415 kb on - strand, within MPMX19_01166at 1205.415 kb on - strand, within MPMX19_01166at 1205.415 kb on - strand, within MPMX19_01166at 1205.415 kb on - strand, within MPMX19_01166at 1205.415 kb on - strand, within MPMX19_01166at 1205.415 kb on - strand, within MPMX19_01166at 1205.415 kb on - strand, within MPMX19_01166at 1205.415 kb on - strand, within MPMX19_01166at 1205.415 kb on - strand, within MPMX19_01166at 1205.415 kb on - strand, within MPMX19_01166at 1205.415 kb on - strand, within MPMX19_01166at 1205.415 kb on - strand, within MPMX19_01166at 1205.415 kb on - strand, within MPMX19_01166at 1205.415 kb on - strand, within MPMX19_01166at 1205.415 kb on - strand, within MPMX19_01166at 1205.415 kb on - strand, within MPMX19_01166at 1205.415 kb on - strand, within MPMX19_01166at 1205.415 kb on - strand, within MPMX19_01166at 1205.415 kb on - strand, within MPMX19_01166at 1206.866 kb on - strand, within MPMX19_01168

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction MGL
remove
1,205,174 + MPMX19_01166 0.56 -1.0
1,205,174 + MPMX19_01166 0.56 -0.2
1,205,174 + MPMX19_01166 0.56 +0.7
1,205,174 + MPMX19_01166 0.56 -1.6
1,205,174 + MPMX19_01166 0.56 -1.0
1,205,174 + MPMX19_01166 0.56 -1.2
1,205,174 + MPMX19_01166 0.56 -0.0
1,205,174 + MPMX19_01166 0.56 -1.2
1,205,174 + MPMX19_01166 0.56 -2.3
1,205,174 + MPMX19_01166 0.56 +0.7
1,205,174 + MPMX19_01166 0.56 -1.4
1,205,174 + MPMX19_01166 0.56 -1.5
1,205,174 + MPMX19_01166 0.56 -0.0
1,205,174 + MPMX19_01166 0.56 +0.6
1,205,174 + MPMX19_01166 0.56 -1.1
1,205,174 + MPMX19_01166 0.56 -0.9
1,205,174 + MPMX19_01166 0.56 -0.3
1,205,175 - MPMX19_01166 0.56 +0.7
1,205,175 - MPMX19_01166 0.56 -2.3
1,205,175 - MPMX19_01166 0.56 -1.3
1,205,175 - MPMX19_01166 0.56 -1.7
1,205,175 - MPMX19_01166 0.56 +1.2
1,205,175 - MPMX19_01166 0.56 -1.5
1,205,175 - MPMX19_01166 0.56 -0.3
1,205,175 - MPMX19_01166 0.56 +0.4
1,205,175 - MPMX19_01166 0.56 -1.2
1,205,175 - MPMX19_01166 0.56 +0.3
1,205,175 - MPMX19_01166 0.56 -0.9
1,205,175 - MPMX19_01166 0.56 -1.0
1,205,175 - MPMX19_01166 0.56 -0.5
1,205,175 - MPMX19_01166 0.56 -1.6
1,205,175 - MPMX19_01166 0.56 -0.2
1,205,175 - MPMX19_01166 0.56 -1.2
1,205,237 + MPMX19_01166 0.63 +0.1
1,205,237 + MPMX19_01166 0.63 -1.0
1,205,237 + MPMX19_01166 0.63 -2.4
1,205,237 + MPMX19_01166 0.63 -0.5
1,205,237 + MPMX19_01166 0.63 -0.0
1,205,237 + MPMX19_01166 0.63 -0.3
1,205,237 + MPMX19_01166 0.63 +2.3
1,205,238 - MPMX19_01166 0.64 -0.9
1,205,238 - MPMX19_01166 0.64 -1.4
1,205,238 - MPMX19_01166 0.64 -1.2
1,205,238 - MPMX19_01166 0.64 -0.0
1,205,238 - MPMX19_01166 0.64 -0.0
1,205,238 - MPMX19_01166 0.64 -0.3
1,205,393 + MPMX19_01166 0.81 -1.4
1,205,393 + MPMX19_01166 0.81 -2.2
1,205,393 + MPMX19_01166 0.81 +0.6
1,205,393 + MPMX19_01166 0.81 -0.9
1,205,393 + MPMX19_01166 0.81 +0.7
1,205,393 + MPMX19_01166 0.81 -0.8
1,205,393 + MPMX19_01166 0.81 -0.4
1,205,393 + MPMX19_01166 0.81 -0.3
1,205,393 + MPMX19_01166 0.81 +0.1
1,205,393 + MPMX19_01166 0.81 -1.2
1,205,393 + MPMX19_01166 0.81 +0.6
1,205,393 + MPMX19_01166 0.81 -0.7
1,205,393 + MPMX19_01166 0.81 -0.7
1,205,393 + MPMX19_01166 0.81 -1.5
1,205,393 + MPMX19_01166 0.81 -0.7
1,205,393 + MPMX19_01166 0.81 -1.4
1,205,393 + MPMX19_01166 0.81 -1.0
1,205,393 + MPMX19_01166 0.81 -0.5
1,205,394 - MPMX19_01166 0.81 -1.6
1,205,394 - MPMX19_01166 0.81 +0.3
1,205,394 - MPMX19_01166 0.81 -0.2
1,205,394 - MPMX19_01166 0.81 -0.0
1,205,394 - MPMX19_01166 0.81 +0.3
1,205,394 - MPMX19_01166 0.81 -0.5
1,205,394 - MPMX19_01166 0.81 +0.1
1,205,394 - MPMX19_01166 0.81 -0.0
1,205,394 - MPMX19_01166 0.81 -1.9
1,205,394 - MPMX19_01166 0.81 -0.9
1,205,394 - MPMX19_01166 0.81 -1.0
1,205,394 - MPMX19_01166 0.81 -1.4
1,205,394 - MPMX19_01166 0.81 -1.0
1,205,394 - MPMX19_01166 0.81 -0.1
1,205,394 - MPMX19_01166 0.81 -2.4
1,205,394 - MPMX19_01166 0.81 -1.5
1,205,394 - MPMX19_01166 0.81 -1.3
1,205,394 - MPMX19_01166 0.81 -0.5
1,205,414 + MPMX19_01166 0.83 -0.4
1,205,414 + MPMX19_01166 0.83 -0.0
1,205,414 + MPMX19_01166 0.83 -0.2
1,205,414 + MPMX19_01166 0.83 +0.4
1,205,414 + MPMX19_01166 0.83 -0.3
1,205,414 + MPMX19_01166 0.83 -0.9
1,205,414 + MPMX19_01166 0.83 -1.3
1,205,414 + MPMX19_01166 0.83 -0.2
1,205,414 + MPMX19_01166 0.83 -1.2
1,205,414 + MPMX19_01166 0.83 +0.3
1,205,414 + MPMX19_01166 0.83 -1.1
1,205,414 + MPMX19_01166 0.83 -0.9
1,205,414 + MPMX19_01166 0.83 -0.2
1,205,414 + MPMX19_01166 0.83 -0.7
1,205,415 - MPMX19_01166 0.83 -1.5
1,205,415 - MPMX19_01166 0.83 -1.8
1,205,415 - MPMX19_01166 0.83 -0.3
1,205,415 - MPMX19_01166 0.83 -1.3
1,205,415 - MPMX19_01166 0.83 +1.1
1,205,415 - MPMX19_01166 0.83 -0.9
1,205,415 - MPMX19_01166 0.83 +1.3
1,205,415 - MPMX19_01166 0.83 +0.7
1,205,415 - MPMX19_01166 0.83 +0.3
1,205,415 - MPMX19_01166 0.83 -1.0
1,205,415 - MPMX19_01166 0.83 -1.2
1,205,415 - MPMX19_01166 0.83 -0.0
1,205,415 - MPMX19_01166 0.83 -0.3
1,205,415 - MPMX19_01166 0.83 -1.0
1,205,415 - MPMX19_01166 0.83 -0.9
1,205,415 - MPMX19_01166 0.83 +0.9
1,205,415 - MPMX19_01166 0.83 -2.0
1,205,415 - MPMX19_01166 0.83 +0.6
1,205,415 - MPMX19_01166 0.83 -0.6
1,205,415 - MPMX19_01166 0.83 -1.5
1,206,866 - MPMX19_01168 0.11 -0.2

Or see this region's nucleotide sequence