Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_00174

Experiment: MGL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_00172 and MPMX19_00173 are separated by 72 nucleotidesMPMX19_00173 and MPMX19_00174 are separated by 23 nucleotidesMPMX19_00174 and MPMX19_00175 are separated by 30 nucleotides MPMX19_00172: MPMX19_00172 - hypothetical protein, at 178,124 to 178,600 _00172 MPMX19_00173: MPMX19_00173 - hypothetical protein, at 178,673 to 179,053 _00173 MPMX19_00174: MPMX19_00174 - hypothetical protein, at 179,077 to 179,304 _00174 MPMX19_00175: MPMX19_00175 - hypothetical protein, at 179,335 to 186,132 _00175 Position (kb) 179 180Strain fitness (log2 ratio) -2 -1 0 1 2at 178.202 kb on + strand, within MPMX19_00172at 178.202 kb on + strand, within MPMX19_00172at 178.202 kb on + strand, within MPMX19_00172at 178.202 kb on + strand, within MPMX19_00172at 178.202 kb on + strand, within MPMX19_00172at 178.202 kb on + strand, within MPMX19_00172at 178.202 kb on + strand, within MPMX19_00172at 178.202 kb on + strand, within MPMX19_00172at 178.202 kb on + strand, within MPMX19_00172at 178.202 kb on + strand, within MPMX19_00172at 178.202 kb on + strand, within MPMX19_00172at 178.202 kb on + strand, within MPMX19_00172at 178.202 kb on + strand, within MPMX19_00172at 178.203 kb on - strand, within MPMX19_00172at 178.203 kb on - strand, within MPMX19_00172at 178.203 kb on - strand, within MPMX19_00172at 178.203 kb on - strand, within MPMX19_00172at 178.203 kb on - strand, within MPMX19_00172at 178.203 kb on - strand, within MPMX19_00172at 178.203 kb on - strand, within MPMX19_00172at 178.203 kb on - strand, within MPMX19_00172at 178.203 kb on - strand, within MPMX19_00172at 178.203 kb on - strand, within MPMX19_00172at 178.203 kb on - strand, within MPMX19_00172at 178.203 kb on - strand, within MPMX19_00172at 178.203 kb on - strand, within MPMX19_00172at 178.203 kb on - strand, within MPMX19_00172at 178.203 kb on - strand, within MPMX19_00172at 178.203 kb on - strand, within MPMX19_00172at 178.203 kb on - strand, within MPMX19_00172at 178.203 kb on - strand, within MPMX19_00172at 178.280 kb on + strand, within MPMX19_00172at 178.280 kb on + strand, within MPMX19_00172at 178.280 kb on + strand, within MPMX19_00172at 178.280 kb on + strand, within MPMX19_00172at 178.280 kb on + strand, within MPMX19_00172at 178.280 kb on + strand, within MPMX19_00172at 178.280 kb on + strand, within MPMX19_00172at 178.280 kb on + strand, within MPMX19_00172at 178.280 kb on + strand, within MPMX19_00172at 178.280 kb on + strand, within MPMX19_00172at 178.280 kb on + strand, within MPMX19_00172at 178.280 kb on + strand, within MPMX19_00172at 178.280 kb on + strand, within MPMX19_00172at 178.280 kb on + strand, within MPMX19_00172at 178.280 kb on + strand, within MPMX19_00172at 178.280 kb on + strand, within MPMX19_00172at 178.280 kb on + strand, within MPMX19_00172at 178.280 kb on + strand, within MPMX19_00172at 178.281 kb on - strand, within MPMX19_00172at 178.281 kb on - strand, within MPMX19_00172at 178.281 kb on - strand, within MPMX19_00172at 178.281 kb on - strand, within MPMX19_00172at 178.281 kb on - strand, within MPMX19_00172at 178.281 kb on - strand, within MPMX19_00172at 178.281 kb on - strand, within MPMX19_00172at 178.281 kb on - strand, within MPMX19_00172at 178.281 kb on - strand, within MPMX19_00172at 178.281 kb on - strand, within MPMX19_00172at 178.281 kb on - strand, within MPMX19_00172at 178.281 kb on - strand, within MPMX19_00172at 178.281 kb on - strand, within MPMX19_00172at 178.281 kb on - strand, within MPMX19_00172at 178.281 kb on - strand, within MPMX19_00172at 178.281 kb on - strand, within MPMX19_00172at 178.281 kb on - strand, within MPMX19_00172at 178.281 kb on - strand, within MPMX19_00172at 178.281 kb on - strand, within MPMX19_00172at 178.281 kb on - strand, within MPMX19_00172at 178.281 kb on - strand, within MPMX19_00172at 178.281 kb on - strand, within MPMX19_00172at 178.281 kb on - strand, within MPMX19_00172at 178.281 kb on - strand, within MPMX19_00172at 178.281 kb on - strand, within MPMX19_00172at 178.331 kb on + strand, within MPMX19_00172at 178.331 kb on + strand, within MPMX19_00172at 178.332 kb on - strand, within MPMX19_00172at 178.332 kb on - strand, within MPMX19_00172at 178.421 kb on + strand, within MPMX19_00172at 178.421 kb on + strand, within MPMX19_00172at 178.421 kb on + strand, within MPMX19_00172at 178.421 kb on + strand, within MPMX19_00172at 178.421 kb on + strand, within MPMX19_00172at 178.421 kb on + strand, within MPMX19_00172at 178.421 kb on + strand, within MPMX19_00172at 178.421 kb on + strand, within MPMX19_00172at 178.421 kb on + strand, within MPMX19_00172at 178.421 kb on + strand, within MPMX19_00172at 178.422 kb on - strand, within MPMX19_00172at 178.422 kb on - strand, within MPMX19_00172at 178.422 kb on - strand, within MPMX19_00172at 178.422 kb on - strand, within MPMX19_00172at 178.422 kb on - strand, within MPMX19_00172at 178.422 kb on - strand, within MPMX19_00172at 178.478 kb on + strand, within MPMX19_00172at 178.478 kb on + strand, within MPMX19_00172at 178.478 kb on + strand, within MPMX19_00172at 178.478 kb on + strand, within MPMX19_00172at 178.478 kb on + strand, within MPMX19_00172at 178.478 kb on + strand, within MPMX19_00172at 178.478 kb on + strand, within MPMX19_00172at 178.478 kb on + strand, within MPMX19_00172at 178.478 kb on + strand, within MPMX19_00172at 178.478 kb on + strand, within MPMX19_00172at 178.478 kb on + strand, within MPMX19_00172at 178.479 kb on - strand, within MPMX19_00172at 178.479 kb on - strand, within MPMX19_00172at 178.479 kb on - strand, within MPMX19_00172at 178.479 kb on - strand, within MPMX19_00172at 178.479 kb on - strand, within MPMX19_00172at 178.479 kb on - strand, within MPMX19_00172at 178.479 kb on - strand, within MPMX19_00172at 178.479 kb on - strand, within MPMX19_00172at 178.479 kb on - strand, within MPMX19_00172at 178.479 kb on - strand, within MPMX19_00172at 178.479 kb on - strand, within MPMX19_00172at 178.490 kb on + strand, within MPMX19_00172at 178.490 kb on + strand, within MPMX19_00172at 178.490 kb on + strand, within MPMX19_00172at 178.490 kb on + strand, within MPMX19_00172at 178.490 kb on + strand, within MPMX19_00172at 178.490 kb on + strand, within MPMX19_00172at 178.490 kb on + strand, within MPMX19_00172at 178.490 kb on + strand, within MPMX19_00172at 178.490 kb on + strand, within MPMX19_00172at 178.491 kb on - strand, within MPMX19_00172at 178.491 kb on - strand, within MPMX19_00172at 178.491 kb on - strand, within MPMX19_00172at 178.491 kb on - strand, within MPMX19_00172at 178.491 kb on - strand, within MPMX19_00172at 178.491 kb on - strand, within MPMX19_00172at 178.491 kb on - strand, within MPMX19_00172at 178.491 kb on - strand, within MPMX19_00172at 178.491 kb on - strand, within MPMX19_00172at 178.491 kb on - strand, within MPMX19_00172at 178.491 kb on - strand, within MPMX19_00172at 178.502 kb on + strand, within MPMX19_00172at 178.502 kb on + strand, within MPMX19_00172at 178.502 kb on + strand, within MPMX19_00172at 178.502 kb on + strand, within MPMX19_00172at 178.502 kb on + strand, within MPMX19_00172at 178.502 kb on + strand, within MPMX19_00172at 178.502 kb on + strand, within MPMX19_00172at 178.502 kb on + strand, within MPMX19_00172at 178.502 kb on + strand, within MPMX19_00172at 178.502 kb on + strand, within MPMX19_00172at 178.502 kb on + strand, within MPMX19_00172at 178.502 kb on + strand, within MPMX19_00172at 178.502 kb on + strand, within MPMX19_00172at 178.502 kb on + strand, within MPMX19_00172at 178.502 kb on + strand, within MPMX19_00172at 178.502 kb on + strand, within MPMX19_00172at 178.502 kb on + strand, within MPMX19_00172at 178.502 kb on + strand, within MPMX19_00172at 178.502 kb on + strand, within MPMX19_00172at 178.502 kb on + strand, within MPMX19_00172at 178.502 kb on + strand, within MPMX19_00172at 178.502 kb on + strand, within MPMX19_00172at 178.502 kb on + strand, within MPMX19_00172at 178.503 kb on - strand, within MPMX19_00172at 178.503 kb on - strand, within MPMX19_00172at 178.503 kb on - strand, within MPMX19_00172at 178.503 kb on - strand, within MPMX19_00172at 178.503 kb on - strand, within MPMX19_00172at 178.503 kb on - strand, within MPMX19_00172at 178.503 kb on - strand, within MPMX19_00172at 178.503 kb on - strand, within MPMX19_00172at 178.503 kb on - strand, within MPMX19_00172at 178.503 kb on - strand, within MPMX19_00172at 178.503 kb on - strand, within MPMX19_00172at 178.503 kb on - strand, within MPMX19_00172at 178.503 kb on - strand, within MPMX19_00172at 178.503 kb on - strand, within MPMX19_00172at 178.503 kb on - strand, within MPMX19_00172at 178.598 kb on + strandat 178.598 kb on + strandat 178.599 kb on - strandat 178.790 kb on + strand, within MPMX19_00173at 178.790 kb on + strand, within MPMX19_00173at 178.790 kb on + strand, within MPMX19_00173at 178.790 kb on + strand, within MPMX19_00173at 178.790 kb on + strand, within MPMX19_00173at 178.791 kb on - strand, within MPMX19_00173at 178.791 kb on - strand, within MPMX19_00173at 178.791 kb on - strand, within MPMX19_00173at 178.791 kb on - strand, within MPMX19_00173at 179.065 kb on + strandat 179.065 kb on + strandat 179.065 kb on + strandat 179.065 kb on + strandat 179.066 kb on - strandat 179.066 kb on - strandat 179.066 kb on - strandat 179.066 kb on - strandat 179.066 kb on - strandat 179.086 kb on + strandat 179.086 kb on + strandat 179.087 kb on - strandat 179.087 kb on - strandat 179.087 kb on - strandat 179.602 kb on + strandat 179.602 kb on + strandat 179.602 kb on + strandat 179.602 kb on + strandat 179.602 kb on + strandat 179.602 kb on + strandat 179.602 kb on + strandat 179.602 kb on + strandat 179.603 kb on - strandat 179.603 kb on - strandat 179.698 kb on + strandat 179.698 kb on + strandat 179.698 kb on + strandat 179.698 kb on + strandat 179.698 kb on + strandat 179.698 kb on + strandat 179.699 kb on - strandat 179.699 kb on - strandat 179.699 kb on - strandat 179.699 kb on - strandat 179.699 kb on - strandat 179.699 kb on - strandat 180.301 kb on + strand, within MPMX19_00175at 180.301 kb on + strand, within MPMX19_00175at 180.302 kb on - strand, within MPMX19_00175at 180.302 kb on - strand, within MPMX19_00175at 180.302 kb on - strand, within MPMX19_00175

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Per-strain Table

Position Strand Gene LocusTag Fraction MGL
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178,202 + MPMX19_00172 0.16 -2.1
178,202 + MPMX19_00172 0.16 -1.1
178,202 + MPMX19_00172 0.16 -2.1
178,202 + MPMX19_00172 0.16 -1.2
178,202 + MPMX19_00172 0.16 -1.4
178,202 + MPMX19_00172 0.16 -2.1
178,202 + MPMX19_00172 0.16 +1.8
178,202 + MPMX19_00172 0.16 -1.4
178,202 + MPMX19_00172 0.16 -0.6
178,202 + MPMX19_00172 0.16 +0.1
178,202 + MPMX19_00172 0.16 -0.6
178,202 + MPMX19_00172 0.16 +0.7
178,202 + MPMX19_00172 0.16 -1.5
178,203 - MPMX19_00172 0.17 -1.5
178,203 - MPMX19_00172 0.17 -1.6
178,203 - MPMX19_00172 0.17 -0.9
178,203 - MPMX19_00172 0.17 +0.1
178,203 - MPMX19_00172 0.17 -0.4
178,203 - MPMX19_00172 0.17 -2.3
178,203 - MPMX19_00172 0.17 -1.0
178,203 - MPMX19_00172 0.17 +0.8
178,203 - MPMX19_00172 0.17 -0.6
178,203 - MPMX19_00172 0.17 -0.9
178,203 - MPMX19_00172 0.17 +1.2
178,203 - MPMX19_00172 0.17 -0.4
178,203 - MPMX19_00172 0.17 -1.2
178,203 - MPMX19_00172 0.17 -0.9
178,203 - MPMX19_00172 0.17 +0.1
178,203 - MPMX19_00172 0.17 -0.3
178,203 - MPMX19_00172 0.17 -2.0
178,203 - MPMX19_00172 0.17 -2.1
178,280 + MPMX19_00172 0.33 -0.8
178,280 + MPMX19_00172 0.33 -0.3
178,280 + MPMX19_00172 0.33 -0.0
178,280 + MPMX19_00172 0.33 -1.1
178,280 + MPMX19_00172 0.33 -2.4
178,280 + MPMX19_00172 0.33 -1.0
178,280 + MPMX19_00172 0.33 +0.3
178,280 + MPMX19_00172 0.33 -0.7
178,280 + MPMX19_00172 0.33 -0.8
178,280 + MPMX19_00172 0.33 -1.3
178,280 + MPMX19_00172 0.33 +0.4
178,280 + MPMX19_00172 0.33 -1.0
178,280 + MPMX19_00172 0.33 -0.4
178,280 + MPMX19_00172 0.33 -0.2
178,280 + MPMX19_00172 0.33 -0.6
178,280 + MPMX19_00172 0.33 -0.4
178,280 + MPMX19_00172 0.33 -1.9
178,280 + MPMX19_00172 0.33 -1.3
178,281 - MPMX19_00172 0.33 -0.6
178,281 - MPMX19_00172 0.33 -0.9
178,281 - MPMX19_00172 0.33 -0.9
178,281 - MPMX19_00172 0.33 -0.3
178,281 - MPMX19_00172 0.33 -1.3
178,281 - MPMX19_00172 0.33 -0.2
178,281 - MPMX19_00172 0.33 -0.1
178,281 - MPMX19_00172 0.33 -1.4
178,281 - MPMX19_00172 0.33 -1.1
178,281 - MPMX19_00172 0.33 -1.3
178,281 - MPMX19_00172 0.33 -0.9
178,281 - MPMX19_00172 0.33 -1.5
178,281 - MPMX19_00172 0.33 -1.8
178,281 - MPMX19_00172 0.33 +0.8
178,281 - MPMX19_00172 0.33 +1.2
178,281 - MPMX19_00172 0.33 +1.0
178,281 - MPMX19_00172 0.33 +0.3
178,281 - MPMX19_00172 0.33 -0.7
178,281 - MPMX19_00172 0.33 -0.6
178,281 - MPMX19_00172 0.33 -1.5
178,281 - MPMX19_00172 0.33 -0.8
178,281 - MPMX19_00172 0.33 -2.1
178,281 - MPMX19_00172 0.33 -1.2
178,281 - MPMX19_00172 0.33 -0.3
178,281 - MPMX19_00172 0.33 -0.1
178,331 + MPMX19_00172 0.43 +0.4
178,331 + MPMX19_00172 0.43 -0.7
178,332 - MPMX19_00172 0.44 -0.5
178,332 - MPMX19_00172 0.44 -1.7
178,421 + MPMX19_00172 0.62 -0.3
178,421 + MPMX19_00172 0.62 -0.9
178,421 + MPMX19_00172 0.62 -0.4
178,421 + MPMX19_00172 0.62 -0.6
178,421 + MPMX19_00172 0.62 +0.5
178,421 + MPMX19_00172 0.62 +0.4
178,421 + MPMX19_00172 0.62 -1.1
178,421 + MPMX19_00172 0.62 -0.7
178,421 + MPMX19_00172 0.62 -1.2
178,421 + MPMX19_00172 0.62 -1.6
178,422 - MPMX19_00172 0.62 +1.2
178,422 - MPMX19_00172 0.62 -1.2
178,422 - MPMX19_00172 0.62 +1.4
178,422 - MPMX19_00172 0.62 -0.0
178,422 - MPMX19_00172 0.62 +0.1
178,422 - MPMX19_00172 0.62 -0.3
178,478 + MPMX19_00172 0.74 -2.1
178,478 + MPMX19_00172 0.74 -1.6
178,478 + MPMX19_00172 0.74 -0.4
178,478 + MPMX19_00172 0.74 -2.3
178,478 + MPMX19_00172 0.74 -2.5
178,478 + MPMX19_00172 0.74 -1.5
178,478 + MPMX19_00172 0.74 -0.4
178,478 + MPMX19_00172 0.74 -1.1
178,478 + MPMX19_00172 0.74 -1.9
178,478 + MPMX19_00172 0.74 -1.3
178,478 + MPMX19_00172 0.74 -2.1
178,479 - MPMX19_00172 0.74 -0.3
178,479 - MPMX19_00172 0.74 -0.3
178,479 - MPMX19_00172 0.74 -0.3
178,479 - MPMX19_00172 0.74 -2.4
178,479 - MPMX19_00172 0.74 -0.4
178,479 - MPMX19_00172 0.74 -2.3
178,479 - MPMX19_00172 0.74 -1.2
178,479 - MPMX19_00172 0.74 -1.5
178,479 - MPMX19_00172 0.74 -0.9
178,479 - MPMX19_00172 0.74 -1.5
178,479 - MPMX19_00172 0.74 -0.2
178,490 + MPMX19_00172 0.77 -1.3
178,490 + MPMX19_00172 0.77 -1.3
178,490 + MPMX19_00172 0.77 -1.3
178,490 + MPMX19_00172 0.77 -2.3
178,490 + MPMX19_00172 0.77 +0.8
178,490 + MPMX19_00172 0.77 -0.3
178,490 + MPMX19_00172 0.77 +0.4
178,490 + MPMX19_00172 0.77 +0.1
178,490 + MPMX19_00172 0.77 -1.5
178,491 - MPMX19_00172 0.77 -0.0
178,491 - MPMX19_00172 0.77 -0.7
178,491 - MPMX19_00172 0.77 +0.6
178,491 - MPMX19_00172 0.77 +0.8
178,491 - MPMX19_00172 0.77 -1.1
178,491 - MPMX19_00172 0.77 -0.4
178,491 - MPMX19_00172 0.77 -0.9
178,491 - MPMX19_00172 0.77 +0.1
178,491 - MPMX19_00172 0.77 -0.6
178,491 - MPMX19_00172 0.77 -1.0
178,491 - MPMX19_00172 0.77 -0.1
178,502 + MPMX19_00172 0.79 -2.2
178,502 + MPMX19_00172 0.79 -0.5
178,502 + MPMX19_00172 0.79 -2.0
178,502 + MPMX19_00172 0.79 -2.4
178,502 + MPMX19_00172 0.79 -1.6
178,502 + MPMX19_00172 0.79 +0.4
178,502 + MPMX19_00172 0.79 -2.4
178,502 + MPMX19_00172 0.79 -1.4
178,502 + MPMX19_00172 0.79 -0.7
178,502 + MPMX19_00172 0.79 -0.4
178,502 + MPMX19_00172 0.79 -0.8
178,502 + MPMX19_00172 0.79 -0.9
178,502 + MPMX19_00172 0.79 -0.2
178,502 + MPMX19_00172 0.79 +0.7
178,502 + MPMX19_00172 0.79 -1.6
178,502 + MPMX19_00172 0.79 +0.4
178,502 + MPMX19_00172 0.79 -1.5
178,502 + MPMX19_00172 0.79 -1.7
178,502 + MPMX19_00172 0.79 +1.1
178,502 + MPMX19_00172 0.79 -1.0
178,502 + MPMX19_00172 0.79 -0.2
178,502 + MPMX19_00172 0.79 -1.4
178,502 + MPMX19_00172 0.79 -0.9
178,503 - MPMX19_00172 0.79 -0.2
178,503 - MPMX19_00172 0.79 +2.0
178,503 - MPMX19_00172 0.79 +1.2
178,503 - MPMX19_00172 0.79 -0.9
178,503 - MPMX19_00172 0.79 -0.4
178,503 - MPMX19_00172 0.79 -1.3
178,503 - MPMX19_00172 0.79 -0.2
178,503 - MPMX19_00172 0.79 -0.3
178,503 - MPMX19_00172 0.79 +0.1
178,503 - MPMX19_00172 0.79 -1.1
178,503 - MPMX19_00172 0.79 -0.3
178,503 - MPMX19_00172 0.79 -2.4
178,503 - MPMX19_00172 0.79 -0.5
178,503 - MPMX19_00172 0.79 -0.6
178,503 - MPMX19_00172 0.79 -0.4
178,598 + -1.0
178,598 + +0.8
178,599 - -0.8
178,790 + MPMX19_00173 0.31 -1.3
178,790 + MPMX19_00173 0.31 -1.1
178,790 + MPMX19_00173 0.31 -1.4
178,790 + MPMX19_00173 0.31 -1.5
178,790 + MPMX19_00173 0.31 -1.1
178,791 - MPMX19_00173 0.31 -2.1
178,791 - MPMX19_00173 0.31 +0.4
178,791 - MPMX19_00173 0.31 +0.2
178,791 - MPMX19_00173 0.31 +1.7
179,065 + -0.8
179,065 + -1.4
179,065 + -2.0
179,065 + -1.4
179,066 - +1.8
179,066 - -0.9
179,066 - -2.1
179,066 - +0.1
179,066 - -0.4
179,086 + -1.7
179,086 + +0.8
179,087 - -1.5
179,087 - +2.0
179,087 - +0.7
179,602 + -0.1
179,602 + -1.0
179,602 + -0.2
179,602 + -1.3
179,602 + +0.3
179,602 + -1.9
179,602 + -1.0
179,602 + +0.6
179,603 - -0.9
179,603 - -1.3
179,698 + -0.4
179,698 + +1.1
179,698 + -0.2
179,698 + -0.7
179,698 + -1.3
179,698 + -1.0
179,699 - -0.3
179,699 - -0.5
179,699 - -1.3
179,699 - +1.4
179,699 - -1.0
179,699 - +1.1
180,301 + MPMX19_00175 0.14 -1.5
180,301 + MPMX19_00175 0.14 -2.2
180,302 - MPMX19_00175 0.14 +0.7
180,302 - MPMX19_00175 0.14 -0.3
180,302 - MPMX19_00175 0.14 +1.2

Or see this region's nucleotide sequence