Experiment: lib only
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_04345 and OHPLBJKB_04346 are separated by 537 nucleotides OHPLBJKB_04346 and OHPLBJKB_04347 are separated by 105 nucleotides
OHPLBJKB_04345: OHPLBJKB_04345 - Tryptophanase, at 4,568,683 to 4,570,098
_04345
OHPLBJKB_04346: OHPLBJKB_04346 - tRNA modification GTPase MnmE, at 4,570,636 to 4,572,000
_04346
OHPLBJKB_04347: OHPLBJKB_04347 - Membrane protein insertase YidC, at 4,572,106 to 4,573,752
_04347
Position (kb)
4570
4571
4572
4573 Strain fitness (log2 ratio)
-2
-1
0
1 at 4569.638 kb on + strand, within OHPLBJKB_04345 at 4569.639 kb on - strand, within OHPLBJKB_04345 at 4569.639 kb on - strand, within OHPLBJKB_04345 at 4569.639 kb on - strand, within OHPLBJKB_04345 at 4569.639 kb on - strand, within OHPLBJKB_04345 at 4569.639 kb on - strand, within OHPLBJKB_04345 at 4569.645 kb on + strand, within OHPLBJKB_04345 at 4569.672 kb on + strand, within OHPLBJKB_04345 at 4569.698 kb on + strand, within OHPLBJKB_04345 at 4569.699 kb on - strand, within OHPLBJKB_04345 at 4569.771 kb on + strand, within OHPLBJKB_04345 at 4569.774 kb on - strand, within OHPLBJKB_04345 at 4569.878 kb on + strand, within OHPLBJKB_04345 at 4569.878 kb on + strand, within OHPLBJKB_04345 at 4569.878 kb on + strand, within OHPLBJKB_04345 at 4569.879 kb on - strand, within OHPLBJKB_04345 at 4569.879 kb on - strand, within OHPLBJKB_04345 at 4569.912 kb on + strand, within OHPLBJKB_04345 at 4569.913 kb on - strand, within OHPLBJKB_04345 at 4569.949 kb on + strand, within OHPLBJKB_04345 at 4569.954 kb on - strand, within OHPLBJKB_04345 at 4570.035 kb on + strand at 4570.054 kb on - strand at 4570.175 kb on + strand at 4570.178 kb on - strand at 4570.209 kb on + strand at 4570.246 kb on + strand at 4570.376 kb on + strand at 4570.376 kb on + strand at 4570.376 kb on + strand at 4570.379 kb on - strand at 4570.383 kb on - strand at 4570.424 kb on - strand at 4570.638 kb on - strand at 4570.638 kb on - strand at 4570.642 kb on - strand at 4572.083 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction lib only remove 4,569,638 + OHPLBJKB_04345 0.67 +0.4 4,569,639 - OHPLBJKB_04345 0.68 -0.8 4,569,639 - OHPLBJKB_04345 0.68 +0.7 4,569,639 - OHPLBJKB_04345 0.68 -1.1 4,569,639 - OHPLBJKB_04345 0.68 -0.4 4,569,639 - OHPLBJKB_04345 0.68 -0.3 4,569,645 + OHPLBJKB_04345 0.68 -0.7 4,569,672 + OHPLBJKB_04345 0.70 +0.5 4,569,698 + OHPLBJKB_04345 0.72 -2.0 4,569,699 - OHPLBJKB_04345 0.72 -1.0 4,569,771 + OHPLBJKB_04345 0.77 +0.1 4,569,774 - OHPLBJKB_04345 0.77 -0.5 4,569,878 + OHPLBJKB_04345 0.84 -0.6 4,569,878 + OHPLBJKB_04345 0.84 -0.1 4,569,878 + OHPLBJKB_04345 0.84 -1.4 4,569,879 - OHPLBJKB_04345 0.84 +0.1 4,569,879 - OHPLBJKB_04345 0.84 -0.7 4,569,912 + OHPLBJKB_04345 0.87 -0.5 4,569,913 - OHPLBJKB_04345 0.87 +0.3 4,569,949 + OHPLBJKB_04345 0.89 +0.0 4,569,954 - OHPLBJKB_04345 0.90 +0.0 4,570,035 + +0.2 4,570,054 - +0.5 4,570,175 + -0.5 4,570,178 - +0.0 4,570,209 + +0.7 4,570,246 + +0.9 4,570,376 + +1.1 4,570,376 + +0.5 4,570,376 + -0.2 4,570,379 - -0.1 4,570,383 - +0.5 4,570,424 - -0.0 4,570,638 - -0.8 4,570,638 - +0.6 4,570,642 - -0.2 4,572,083 + -0.7
Or see this region's nucleotide sequence