Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_03887

Experiment: lib only

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	lib only
4,079,229	+		OHPLBJKB_03886	0.47	+0.4
4,079,229	+		OHPLBJKB_03886	0.47	-0.4
4,079,229	+		OHPLBJKB_03886	0.47	-0.7
4,079,230	-		OHPLBJKB_03886	0.47	+0.2
4,079,230	-		OHPLBJKB_03886	0.47	+0.2
4,079,230	-		OHPLBJKB_03886	0.47	-1.2
4,079,230	-		OHPLBJKB_03886	0.47	-0.6
4,079,231	+		OHPLBJKB_03886	0.47	-0.0
4,079,231	+		OHPLBJKB_03886	0.47	+0.2
4,079,232	-		OHPLBJKB_03886	0.47	+0.4
4,079,326	-		OHPLBJKB_03886	0.52	-1.0
4,079,400	+		OHPLBJKB_03886	0.56	+1.5
4,079,401	-		OHPLBJKB_03886	0.56	-1.6
4,079,401	-		OHPLBJKB_03886	0.56	+0.3
4,079,401	-		OHPLBJKB_03886	0.56	+0.9
4,079,454	+		OHPLBJKB_03886	0.59	-0.5
4,079,454	+		OHPLBJKB_03886	0.59	+0.1
4,079,454	+		OHPLBJKB_03886	0.59	+0.1
4,079,455	-		OHPLBJKB_03886	0.59	-0.8
4,079,455	-		OHPLBJKB_03886	0.59	+1.0
4,079,455	-		OHPLBJKB_03886	0.59	+0.1
4,079,455	-		OHPLBJKB_03886	0.59	-0.2
4,079,455	-		OHPLBJKB_03886	0.59	+0.4
4,079,455	-		OHPLBJKB_03886	0.59	+0.4
4,079,455	-		OHPLBJKB_03886	0.59	-0.0
4,079,455	-		OHPLBJKB_03886	0.59	+0.0
4,079,781	-		OHPLBJKB_03886	0.77	-0.3
4,079,784	+		OHPLBJKB_03886	0.77	-0.4
4,079,784	+		OHPLBJKB_03886	0.77	+0.0
4,079,898	+		OHPLBJKB_03886	0.84	+0.7
4,079,899	-		OHPLBJKB_03886	0.84	-0.0
4,079,899	-		OHPLBJKB_03886	0.84	-0.1
4,079,899	-		OHPLBJKB_03886	0.84	-0.8
4,079,940	-		OHPLBJKB_03886	0.86	+0.2
4,079,940	-		OHPLBJKB_03886	0.86	+0.9
4,079,964	-		OHPLBJKB_03886	0.87	+0.0
4,080,098	+				-0.8
4,080,116	+				-0.2
4,080,116	+				-1.3
4,080,117	-				-1.0
4,080,170	+				+0.6
4,080,226	+				+0.2
4,080,226	+				+1.1
4,080,265	+		OHPLBJKB_03887	0.11	-0.3
4,080,265	+		OHPLBJKB_03887	0.11	+0.9
4,080,265	+		OHPLBJKB_03887	0.11	-0.8
4,080,265	+		OHPLBJKB_03887	0.11	-0.3
4,080,265	+		OHPLBJKB_03887	0.11	-0.7
4,080,266	-		OHPLBJKB_03887	0.11	+0.1
4,080,277	+		OHPLBJKB_03887	0.12	-1.3
4,080,289	-		OHPLBJKB_03887	0.14	+0.7
4,080,289	-		OHPLBJKB_03887	0.14	+0.3
4,080,289	-		OHPLBJKB_03887	0.14	+1.1
4,080,289	-		OHPLBJKB_03887	0.14	-1.8
4,080,313	+		OHPLBJKB_03887	0.17	+0.5
4,080,314	-		OHPLBJKB_03887	0.17	+0.0
4,080,347	-		OHPLBJKB_03887	0.22	-0.0
4,080,420	+		OHPLBJKB_03887	0.32	+0.5
4,080,421	-		OHPLBJKB_03887	0.32	-0.2
4,080,421	-		OHPLBJKB_03887	0.32	-0.2
4,080,421	-		OHPLBJKB_03887	0.32	-0.2
4,080,439	+		OHPLBJKB_03887	0.34	-0.4
4,080,439	+		OHPLBJKB_03887	0.34	-0.7
4,080,439	+		OHPLBJKB_03887	0.34	-0.2
4,080,440	-		OHPLBJKB_03887	0.34	-0.6
4,080,451	-		OHPLBJKB_03887	0.36	+1.0
4,080,471	+		OHPLBJKB_03887	0.39	+0.6
4,080,471	+		OHPLBJKB_03887	0.39	-0.2
4,080,472	-		OHPLBJKB_03887	0.39	-0.4
4,080,472	-		OHPLBJKB_03887	0.39	+1.3
4,080,544	+		OHPLBJKB_03887	0.49	+0.0
4,080,544	+		OHPLBJKB_03887	0.49	-1.7
4,080,545	-		OHPLBJKB_03887	0.49	-1.3
4,080,582	+		OHPLBJKB_03887	0.54	+0.1
4,080,582	+		OHPLBJKB_03887	0.54	+0.2
4,080,582	+		OHPLBJKB_03887	0.54	-0.7
4,080,583	-		OHPLBJKB_03887	0.54	-1.0
4,080,613	+		OHPLBJKB_03887	0.58	-0.1
4,080,613	+		OHPLBJKB_03887	0.58	-0.3
4,080,709	-		OHPLBJKB_03887	0.71	+0.7
4,080,709	-		OHPLBJKB_03887	0.71	-0.2
4,080,724	+		OHPLBJKB_03887	0.73	+0.4
4,080,750	+		OHPLBJKB_03887	0.77	-1.2
4,080,763	-		OHPLBJKB_03887	0.78	-0.2
4,080,791	+		OHPLBJKB_03887	0.82	+0.5
4,080,801	+		OHPLBJKB_03887	0.84	+0.0
4,080,801	+		OHPLBJKB_03887	0.84	+0.2
4,080,802	-		OHPLBJKB_03887	0.84	-0.2
4,080,947	-				+0.2
4,080,953	+				-1.1
4,080,953	+				-0.2
4,080,953	+				-0.1
4,080,953	+				+0.5
4,080,953	+				+0.1
4,080,953	+				-0.5
4,080,954	-				-0.3
4,080,954	-				-0.4
4,080,954	-				+0.6
4,080,954	-				-0.9
4,080,958	-				+0.5
4,080,958	-				-0.2
4,081,007	+		OHPLBJKB_03888	0.19	-0.1
4,081,007	+		OHPLBJKB_03888	0.19	-0.1
4,081,007	+		OHPLBJKB_03888	0.19	-0.3
4,081,008	-		OHPLBJKB_03888	0.19	-0.1
4,081,008	-		OHPLBJKB_03888	0.19	+1.3
4,081,008	-		OHPLBJKB_03888	0.19	+0.2
4,081,227	+		OHPLBJKB_03888	0.74	+0.0
4,081,227	+		OHPLBJKB_03888	0.74	+0.6
4,081,227	+		OHPLBJKB_03888	0.74	+0.3
4,081,259	-		OHPLBJKB_03888	0.83	+0.2
4,081,300	-				-0.3
4,081,300	-				+0.1
4,081,300	-				-0.3
4,081,300	-				-0.8
4,081,319	+				-0.3
4,081,326	-				-0.4
4,081,404	-		OHPLBJKB_03889	0.18	+0.2
4,081,404	-		OHPLBJKB_03889	0.18	+0.7
4,081,404	-		OHPLBJKB_03889	0.18	+0.0
4,081,419	-		OHPLBJKB_03889	0.23	+0.9
4,081,419	-		OHPLBJKB_03889	0.23	-1.0
4,081,448	+		OHPLBJKB_03889	0.31	+0.8
4,081,449	-		OHPLBJKB_03889	0.31	-0.1
4,081,491	+		OHPLBJKB_03889	0.42	-0.0
4,081,577	-		OHPLBJKB_03889	0.66	-1.0
4,081,641	+		OHPLBJKB_03889	0.84	-0.6
4,081,695	+				+0.2
4,081,695	+				-1.1
4,081,700	+				+0.7
4,081,700	+				+0.2
4,081,711	+				-1.1
4,081,712	-				+0.4
4,081,712	-				-0.9
4,081,759	+				-0.2
4,081,759	+				+0.2
4,081,759	+				-0.8
4,081,759	+				-0.5
4,081,759	+				+0.3
4,081,759	+				-0.0
4,081,759	+				+0.1
4,081,760	-				-0.6
4,081,760	-				-0.3
4,081,760	-				+0.1
4,081,788	+				-0.5
4,081,838	-				-0.0
4,081,856	-				-0.3
4,081,856	-				-0.4
4,081,866	+				+0.5
4,081,866	+				-0.4
4,081,866	+				-1.3
4,081,866	+				-0.8
4,081,867	-				-0.2
4,081,867	-				-0.1
4,081,867	-				-0.3
4,081,867	-				-0.4
4,081,867	-				-0.7