Experiment: lib only
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_02462 and OHPLBJKB_02463 overlap by 8 nucleotides OHPLBJKB_02463 and OHPLBJKB_02464 are separated by 0 nucleotides
OHPLBJKB_02462: OHPLBJKB_02462 - Nitrate/nitrite sensor protein NarX, at 2,576,587 to 2,578,383
_02462
OHPLBJKB_02463: OHPLBJKB_02463 - Nitrate/nitrite response regulator protein NarL, at 2,578,376 to 2,579,026
_02463
OHPLBJKB_02464: OHPLBJKB_02464 - Invasin, at 2,579,027 to 2,580,457
_02464
Position (kb)
2578
2579
2580 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2577.410 kb on + strand, within OHPLBJKB_02462 at 2577.420 kb on - strand, within OHPLBJKB_02462 at 2577.428 kb on + strand, within OHPLBJKB_02462 at 2577.451 kb on + strand, within OHPLBJKB_02462 at 2577.451 kb on + strand, within OHPLBJKB_02462 at 2577.487 kb on - strand, within OHPLBJKB_02462 at 2577.502 kb on - strand, within OHPLBJKB_02462 at 2577.517 kb on - strand, within OHPLBJKB_02462 at 2577.546 kb on - strand, within OHPLBJKB_02462 at 2577.600 kb on + strand, within OHPLBJKB_02462 at 2577.601 kb on - strand, within OHPLBJKB_02462 at 2577.612 kb on + strand, within OHPLBJKB_02462 at 2577.648 kb on + strand, within OHPLBJKB_02462 at 2577.649 kb on - strand, within OHPLBJKB_02462 at 2577.878 kb on + strand, within OHPLBJKB_02462 at 2578.001 kb on - strand, within OHPLBJKB_02462 at 2578.001 kb on - strand, within OHPLBJKB_02462 at 2578.106 kb on + strand, within OHPLBJKB_02462 at 2578.107 kb on - strand, within OHPLBJKB_02462 at 2578.247 kb on + strand at 2578.247 kb on + strand at 2578.372 kb on - strand at 2578.400 kb on - strand at 2578.457 kb on - strand, within OHPLBJKB_02463 at 2578.492 kb on + strand, within OHPLBJKB_02463 at 2578.549 kb on - strand, within OHPLBJKB_02463 at 2578.559 kb on - strand, within OHPLBJKB_02463 at 2578.629 kb on + strand, within OHPLBJKB_02463 at 2578.691 kb on + strand, within OHPLBJKB_02463 at 2578.699 kb on - strand, within OHPLBJKB_02463 at 2578.762 kb on - strand, within OHPLBJKB_02463 at 2578.764 kb on + strand, within OHPLBJKB_02463 at 2578.807 kb on + strand, within OHPLBJKB_02463 at 2578.819 kb on + strand, within OHPLBJKB_02463 at 2578.919 kb on - strand, within OHPLBJKB_02463 at 2578.935 kb on + strand, within OHPLBJKB_02463 at 2578.936 kb on - strand, within OHPLBJKB_02463 at 2578.936 kb on - strand, within OHPLBJKB_02463 at 2579.244 kb on - strand, within OHPLBJKB_02464 at 2579.331 kb on - strand, within OHPLBJKB_02464 at 2579.401 kb on + strand, within OHPLBJKB_02464 at 2579.401 kb on + strand, within OHPLBJKB_02464 at 2579.401 kb on + strand, within OHPLBJKB_02464 at 2579.428 kb on + strand, within OHPLBJKB_02464 at 2579.435 kb on + strand, within OHPLBJKB_02464 at 2579.503 kb on + strand, within OHPLBJKB_02464 at 2579.503 kb on + strand, within OHPLBJKB_02464 at 2579.504 kb on - strand, within OHPLBJKB_02464 at 2579.504 kb on - strand, within OHPLBJKB_02464 at 2579.551 kb on + strand, within OHPLBJKB_02464 at 2579.594 kb on + strand, within OHPLBJKB_02464 at 2579.595 kb on - strand, within OHPLBJKB_02464 at 2579.641 kb on + strand, within OHPLBJKB_02464 at 2579.642 kb on - strand, within OHPLBJKB_02464 at 2579.667 kb on + strand, within OHPLBJKB_02464 at 2579.667 kb on + strand, within OHPLBJKB_02464 at 2579.668 kb on - strand, within OHPLBJKB_02464 at 2579.675 kb on + strand, within OHPLBJKB_02464 at 2579.675 kb on + strand, within OHPLBJKB_02464 at 2579.676 kb on - strand, within OHPLBJKB_02464 at 2579.689 kb on + strand, within OHPLBJKB_02464 at 2579.690 kb on - strand, within OHPLBJKB_02464 at 2579.703 kb on + strand, within OHPLBJKB_02464 at 2579.824 kb on - strand, within OHPLBJKB_02464 at 2579.898 kb on + strand, within OHPLBJKB_02464 at 2580.000 kb on + strand, within OHPLBJKB_02464 at 2580.001 kb on - strand, within OHPLBJKB_02464 at 2580.010 kb on + strand, within OHPLBJKB_02464 at 2580.010 kb on + strand, within OHPLBJKB_02464
Per-strain Table
Position Strand Gene LocusTag Fraction lib only remove 2,577,410 + OHPLBJKB_02462 0.46 +0.1 2,577,420 - OHPLBJKB_02462 0.46 -0.5 2,577,428 + OHPLBJKB_02462 0.47 +0.3 2,577,451 + OHPLBJKB_02462 0.48 -1.1 2,577,451 + OHPLBJKB_02462 0.48 +0.4 2,577,487 - OHPLBJKB_02462 0.50 -0.4 2,577,502 - OHPLBJKB_02462 0.51 +0.0 2,577,517 - OHPLBJKB_02462 0.52 +2.1 2,577,546 - OHPLBJKB_02462 0.53 -0.7 2,577,600 + OHPLBJKB_02462 0.56 -0.6 2,577,601 - OHPLBJKB_02462 0.56 -0.4 2,577,612 + OHPLBJKB_02462 0.57 +0.5 2,577,648 + OHPLBJKB_02462 0.59 +0.5 2,577,649 - OHPLBJKB_02462 0.59 -2.2 2,577,878 + OHPLBJKB_02462 0.72 +0.2 2,578,001 - OHPLBJKB_02462 0.79 -2.1 2,578,001 - OHPLBJKB_02462 0.79 -0.4 2,578,106 + OHPLBJKB_02462 0.85 +1.7 2,578,107 - OHPLBJKB_02462 0.85 +1.2 2,578,247 + -0.4 2,578,247 + +0.1 2,578,372 - -0.2 2,578,400 - -0.0 2,578,457 - OHPLBJKB_02463 0.12 -0.9 2,578,492 + OHPLBJKB_02463 0.18 -0.2 2,578,549 - OHPLBJKB_02463 0.27 +0.5 2,578,559 - OHPLBJKB_02463 0.28 +0.7 2,578,629 + OHPLBJKB_02463 0.39 -0.3 2,578,691 + OHPLBJKB_02463 0.48 -0.5 2,578,699 - OHPLBJKB_02463 0.50 -0.6 2,578,762 - OHPLBJKB_02463 0.59 -0.2 2,578,764 + OHPLBJKB_02463 0.60 +0.0 2,578,807 + OHPLBJKB_02463 0.66 -0.9 2,578,819 + OHPLBJKB_02463 0.68 -0.4 2,578,919 - OHPLBJKB_02463 0.83 -1.6 2,578,935 + OHPLBJKB_02463 0.86 +0.6 2,578,936 - OHPLBJKB_02463 0.86 -0.2 2,578,936 - OHPLBJKB_02463 0.86 -0.5 2,579,244 - OHPLBJKB_02464 0.15 +0.6 2,579,331 - OHPLBJKB_02464 0.21 +1.2 2,579,401 + OHPLBJKB_02464 0.26 -0.2 2,579,401 + OHPLBJKB_02464 0.26 -1.1 2,579,401 + OHPLBJKB_02464 0.26 +1.3 2,579,428 + OHPLBJKB_02464 0.28 -1.2 2,579,435 + OHPLBJKB_02464 0.29 +0.0 2,579,503 + OHPLBJKB_02464 0.33 +0.8 2,579,503 + OHPLBJKB_02464 0.33 +1.1 2,579,504 - OHPLBJKB_02464 0.33 +0.5 2,579,504 - OHPLBJKB_02464 0.33 -0.3 2,579,551 + OHPLBJKB_02464 0.37 +0.1 2,579,594 + OHPLBJKB_02464 0.40 +0.3 2,579,595 - OHPLBJKB_02464 0.40 -0.7 2,579,641 + OHPLBJKB_02464 0.43 -0.1 2,579,642 - OHPLBJKB_02464 0.43 +0.0 2,579,667 + OHPLBJKB_02464 0.45 -2.1 2,579,667 + OHPLBJKB_02464 0.45 -1.2 2,579,668 - OHPLBJKB_02464 0.45 -0.0 2,579,675 + OHPLBJKB_02464 0.45 -0.1 2,579,675 + OHPLBJKB_02464 0.45 +0.2 2,579,676 - OHPLBJKB_02464 0.45 +0.2 2,579,689 + OHPLBJKB_02464 0.46 +0.3 2,579,690 - OHPLBJKB_02464 0.46 +0.5 2,579,703 + OHPLBJKB_02464 0.47 +2.4 2,579,824 - OHPLBJKB_02464 0.56 -0.9 2,579,898 + OHPLBJKB_02464 0.61 -0.8 2,580,000 + OHPLBJKB_02464 0.68 -0.4 2,580,001 - OHPLBJKB_02464 0.68 -0.8 2,580,010 + OHPLBJKB_02464 0.69 +0.4 2,580,010 + OHPLBJKB_02464 0.69 -2.4
Or see this region's nucleotide sequence